Basic Information

Insect: Deroplatys truncata
Gene Symbol: -
Assembly: GCA_030765065.1
Location: CM060978.1:48744172-48767470[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00053 0.36 14.2 0.3 2 23 71 93 70 93 0.96

2 16 0.00018 0.12 15.7 1.5 2 23 101 122 100 122 0.97

3 16 2.9e-05 0.019 18.2 1.1 1 23 128 151 128 151 0.94

4 16 0.0012 0.78 13.1 0.3 1 23 157 179 157 179 0.98

5 16 2.8e-06 0.0019 21.4 2.7 1 23 185 207 185 207 0.95

6 16 2.3e-05 0.016 18.5 0.7 2 23 217 238 216 238 0.96

7 16 0.00078 0.52 13.7 3.6 1 23 244 266 244 266 0.92

8 16 8.7e-07 0.00058 23.0 1.0 1 23 272 294 272 294 0.99

9 16 0.00026 0.17 15.2 0.1 1 23 300 322 300 322 0.98

10 16 6.9e-06 0.0046 20.1 0.3 1 23 349 371 349 371 0.99

11 16 2.1e-06 0.0014 21.7 0.9 1 23 377 400 377 400 0.98

12 16 0.0037 2.5 11.5 0.4 1 23 406 428 406 428 0.97

13 16 0.00029 0.19 15.0 1.0 1 23 434 456 434 456 0.98

14 16 7.6e-07 0.0005 23.2 1.4 1 23 462 484 462 484 0.97

15 16 1.1e-06 0.00075 22.6 1.6 1 23 490 512 490 512 0.98

16 16 0.00014 0.092 16.0 0.1 2 23 519 540 518 540 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00053	0.36	14.2	0.3	2	23	71	93	70	93	0.96
2	16	0.00018	0.12	15.7	1.5	2	23	101	122	100	122	0.97
3	16	2.9e-05	0.019	18.2	1.1	1	23	128	151	128	151	0.94
4	16	0.0012	0.78	13.1	0.3	1	23	157	179	157	179	0.98
5	16	2.8e-06	0.0019	21.4	2.7	1	23	185	207	185	207	0.95
6	16	2.3e-05	0.016	18.5	0.7	2	23	217	238	216	238	0.96
7	16	0.00078	0.52	13.7	3.6	1	23	244	266	244	266	0.92
8	16	8.7e-07	0.00058	23.0	1.0	1	23	272	294	272	294	0.99
9	16	0.00026	0.17	15.2	0.1	1	23	300	322	300	322	0.98
10	16	6.9e-06	0.0046	20.1	0.3	1	23	349	371	349	371	0.99
11	16	2.1e-06	0.0014	21.7	0.9	1	23	377	400	377	400	0.98
12	16	0.0037	2.5	11.5	0.4	1	23	406	428	406	428	0.97
13	16	0.00029	0.19	15.0	1.0	1	23	434	456	434	456	0.98
14	16	7.6e-07	0.0005	23.2	1.4	1	23	462	484	462	484	0.97
15	16	1.1e-06	0.00075	22.6	1.6	1	23	490	512	490	512	0.98
16	16	0.00014	0.092	16.0	0.1	2	23	519	540	518	540	0.95

Sequence Information

Coding Sequence: ATGTACAAACACCTTTGCACGATGCTGCTTCATTTCACTAGTGAGCTGGCCAGTCACTCCACAGCATCAGGCAAGTGTACAGCAGGAAGCGCAGTGGTTTGCTATGAGGAGAGCAGCCAAAATGAAGAAGAGATTCTTGCAGAAGAGGAAAGTTCTGAAGAACTAGGAAATGAACCAGAAGACGAAACTAAGTCAGAGATACAACAGTGGCCTTGTGATCTGTGTGACCATGTAGCTAGTAGAAGATCTGCACTTGTGATGCATCAGCGCCGAATGCATGGCCCAGCACCATCATTGTTAACATGTAGCTACTGTGACAAAATTTGCCGCAGTGCCATGGCATTGCGAATGCACGAACGCAGTCATTCTGAGCCACGATCCTATGTGTGTGAATACTGTGGGCGAGCATTTAGAGGACGAAAGACATTACGAGAGCATCATCTAGCAAATCATAGTGAAGAGAGGCCATATAAATGTGATCAGTGTGATCGAAACTACGGCTCACTTACAAGTCTGGGTATCCACCGTGCCACACATTCCAACGAGACTCCATTCTTATGTGATCTTTGTGGCAAAGCCTTCAAACATGTGAGCAATTTGCGTTCACATAAGCGTTCTCATCTTGATGGTGCAAGTAAAAATCGTCAGGTCTGTGAAGTTTGTGGGAAAGGATTCCGATCAAGATTCCATCTCTCGGAGCATGCCAACATTCACCTGGGACGTCGCCCATATGCTTGTACTATTTGTGGCAAGCATTTTCACAAAAAAATCCAATTGCGCCAACACAATTCTGCTCATTCTGGTACACAGCCTTATAAATGCCCATTATGTGGTGTGCGGTTTAATCGACGAGGCAACATGACGCAGCATCTCAAGCGACATGAACGAGAGCGCAAGTATACGTGTCGAGTCTGTGGGGAGGCATTTGCTACTCTTGGAGCTGTGCTTTCTCATCGTAAGAAACACACAAAAGAAGAgGTGGAGAACAGCTTTTGGCAATCTAATGGTGGTTCTGAAGGCAACAAAGATCCAGAGCATGTAGCATTCAAGTGTGAGGTTTGTGGGAAGCTACTTGCAAAGAAAGAATCTTTGACAATCCATATGCGCTCACATACGGGTGAAAAACCATACCAGTGTGGTGTGTGCGGCAAGAAACTCAGTAACAAAGGCTCCTTGTCCTACCACATGAGATCCTTCCATACAGGAGAACGACCTCACACATGCCAGTTTTGTGGGGAAGGATTTGTGTCTCGAGAGGCAAGACTTGTACATGAGAGGATACATACAGGAGAAAAACCATATAGGTGTGACTCTTGTGGTATGGGATTCCGTTGCTCCAGTAACCTGGCTCAACATGCAAGGGTCCATTCTGAAGCTCGTCCGCATCCTTGTACTCAGTGCGGTAAGAGATTCCAACGTAAGGGAGCACTGGATGTGCACATGCGAACTCACACCGGAGAACGTCCATTTCCATGCGAATTGTGCGGCCGAAGATTTACACAGAAGAATGACATGTTAAAGCATCGTCGCACACATTCTCCAAATCGCCCAGTGGTTTGTCAGACTTGCGGTCAGGAATTTCCAAGCAAACGTGACTTGGCCAAGCATAAAGCGATCCATAGAACGCCAGTAGTGGACGAACAGCAGGCTGAAGCCCAGCACACACTCCTCATTACCACAGCAGACAATGTGATTGTTCCCCCATTTCCAGAGATTAACGTGCCTCTTATTGAAAACTCTCAGACCTTGATTCTGCACAGGTTCTGA
Protein Sequence: MYKHLCTMLLHFTSELASHSTASGKCTAGSAVVCYEESSQNEEEILAEEESSEELGNEPEDETKSEIQQWPCDLCDHVASRRSALVMHQRRMHGPAPSLLTCSYCDKICRSAMALRMHERSHSEPRSYVCEYCGRAFRGRKTLREHHLANHSEERPYKCDQCDRNYGSLTSLGIHRATHSNETPFLCDLCGKAFKHVSNLRSHKRSHLDGASKNRQVCEVCGKGFRSRFHLSEHANIHLGRRPYACTICGKHFHKKIQLRQHNSAHSGTQPYKCPLCGVRFNRRGNMTQHLKRHERERKYTCRVCGEAFATLGAVLSHRKKHTKEEVENSFWQSNGGSEGNKDPEHVAFKCEVCGKLLAKKESLTIHMRSHTGEKPYQCGVCGKKLSNKGSLSYHMRSFHTGERPHTCQFCGEGFVSREARLVHERIHTGEKPYRCDSCGMGFRCSSNLAQHARVHSEARPHPCTQCGKRFQRKGALDVHMRTHTGERPFPCELCGRRFTQKNDMLKHRRTHSPNRPVVCQTCGQEFPSKRDLAKHKAIHRTPVVDEQQAEAQHTLLITTADNVIVPPFPEINVPLIENSQTLILHRF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -