Basic Information

Gene Symbol
Camta1
Assembly
GCA_030765065.1
Location
CM060978.1:209942256-210060836[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-15 4.5e-10 42.1 0.0 77 116 63 101 49 101 0.90

Sequence Information

Coding Sequence
ATGTTCGCCGATATATATTCGCAGGAGCTTCGAGAGGGTACGCGAGAGGAGTGGAGACAAGCATCCAGAAATATCTCTTTGCGTTCGAAGACGTTTCCGGTATTTACGTCGGGAAGAGCGCAGCCCTCCTTACCTTCCAACCAACCAGTCGGCCGCGCTGAAGGACATGCGGCTAGCCCGTCCCACGATAGCTCCTGTATATACGGGTGTTACGTCCATTCCGCCATCTTACCAACCTTCCATCGGAGATGTTACTGGCTTCTCCAGAACCCGGACATAGTGCTGGTACACTACCTAAATGTGCCATACCCAGATGACAATAAGTTGGCAGTTATTACGCCAAGCTTGGCGCTCTGGGGTGACAAAAAGGAGTGGACCAAAGAGGAGCTGGTGTCTCAGCTGAAGCCCATGTttttcaGTGAAGATGAGCCAGACCTCAACAATGAACTGGAAATATCAACGGCAGAAACCGTGGAGGCGATAGTGACACAGCTGATGGAAAAACAGCGACTTGCTAGAGCTGCAGCCCTAACGAAGCAATTGGAATGTGGATGTCCAGATTCAACATGTGCAGATGGAAAAACATGTTCCCACCCTATGCGCAGGATATCTGCTGCAAAGACTGGATCCAGCACATCCGAGCTTACTCAGAGCTCTAATTCACGTCAGGCTGTAGTTAGCATGGCTACACTTAACTCTGAGAACAACAATCAGGTGTCATCCACTACTGGGTCTGGCAGTATGATACTGACAGCATCCTCCAACAATGCTGCCAATACAACCACCTCACAACGTAGAGATACGTTGTCACTCCACTCACACCATTCCCACCAACAACAGGCACAGCATGCAAGTTCTGCCAATTCAAGCACAACGTCTACACCCCCATTAGTGCTAAGTCTGTCACAGATTCAGGGTGGAGGAGGACTCCTCATCCTGAACAGTTCATCAGCTAGCAGTTCAGCCAATCCCACCACACATCATCAGTCCCTGGTGACATCTTTTGTGTGTAGCACTAATACAGCTGTTGCTACACATCATCAGACTGCTCGTAGCCACCATCATcaccaacaacagcagcagcagcagcagcaacagcaacatcATCACAATAAGGAACAATCAAAATCTACTACAATAGTGATCAAGCAGGAGGCAATGGAAACAAGTTCGTCTCCATCCTCATGTTGTCATCAGGATAGCAATAcatctaataataatttaaacatcAGCAACAACAATATCAACAAGATGGATGTGACGAATGGCAATGCTACTGCATCagcatttgaaccagtgtatAAGAACATTATGCGTGCATCGACGCCGTCCAACTCAATGAGTAGTGCTCCTCCAACACCTACCAAACACATGGACAcagggggtgggggtggggaagAACTCTCTCCTTATGGAGATACAGTGCTTGTTATTGGTCCCAACAAAGCATCTTCTGCTGATGTCACTGGAGGGGGCTTCTTCAACGAGACACTGGATCTTTCACAAGAAGATATTCAGCGTACCCTGTCAGCCAACATGCCTCTGTCATGTTCAGCTGCAGAATTAGGACCTCCAGGACATCACCGTCATCGCCAAACAGGATCTGGTACCATCACATCAGCAGCAGGAGCACACCATGTCCTTGCCTCAAAATCAATGGGACAAGGGTCTAGTGGAGATGAGATGTCACCTGATGATGTGATAGTGTCGGAAATTAACCCTATGGACTTTATTGACACATGTGATGTAGTCGTTTCACCAACTCAGGTTGATGATGATGTGTTTGTAAATTTGGATGCATTTGATATGCTGGGGGACTTCCCTGAATTGGAAATACTGGAGCCCTCAGCAGAGAGTAACTCAGGACCTACAACAGCAAATGGAAGTGGTGCTAACTCTGGAAGTAATCTAGATCATGGTACTCCAGAGCCAGCACCAGCAACACCTGGCAGTTCTTCTGTAAGTGCTGTGGACAAGAACAGTGATCAGGCTTCACCAAGAATGGATTACCGTGAGGGTACTGCTAACATAACAGATTATTCACCAGAGTGGGCCTATCCTGAGGGTGGAGTTAAGGTGCTTGTGACTGGGCCATGGTATTCAACAACTTCACCATATACTGTGTTATTCGACACATTCCCTGTACCAACTACGCTTGTTCAGAGTGGTGTGCTGAGATGCTACTGTCCTGCTCATGAAGTGGGATTGGCAACATTGCAAGTAGCATGTGAGGGCTTTGTCATTTCCAACTCTGTGATATTTGAGTACAAGAAACCTGTTGCACGTGAAGACCGGGCAGCAGCATGTGAACCTAAGTTAGAACGTAGCAGTAGTGACAACTTGCTCAAGTTTACCCTACTGCAGCGATTAGAGGCCATGGATGACCGGCTGCAGATTAAACAAGAACCCGATGGTTCTGACATGGTTGAAGGCTCAGCACTTTTCAACCAGTCTAACTTTGAAGATCGGTTAGTGAGTTATTGTCAGGAAATGACAAGCAGGGCATGGCGATCTGGTGAAGAGGTGAATCCATCTTGGTTCTCCAGTCATCGAGGTATGACCCTTCTACATCTCGCAGCATCTCTTGGCTATTCAAGgTTGGTCTGTGCGATGTTGCACTGGAGAGCAGAGAATTCCTCGTTGTTACTGGAGACAGAGGTTGATGCTCTCAGCCAAGATGAAGATGGGTATACACCATTGATGTGGGCATGTGCAAGAGGACATAGGGAGACAGCCATTTTGTTATATCAGTGGAATCACACAGCACTAAATGTACGCAACATTGCTGCACAGACAGCTACTGACTGTGCAAGATCCAACACTCATGAGGAGCTTGCGCAGGAAATGGAAAGACTAGAGGCTGCACGAGAAAAGAACAATATGACCTTACTTGGTTCATCCAGCACATCATCCCCAACTTCATCAACAGTGCTGAGTTCTGAGATCTCACCAGCATTGctcacagacactgacagcatgATGGTGGTAGCCTCATCTGCATCTCCCGATATATCAACTCTCTCTCCAGCtggttctgttgtctctcttgcttCTGTTGCCTCTACTGCTCGTTCTCATGATGGTGTCTTCCTCAGACCTGGGGCTGTAACTAGaaATGAATCACAGAAGTACAAAGTATTGAGCCTTGAGCTACATGTCAACATTCCACAATCTGGCAGTAATGGTGGTACCAACAGTGAGACTGCTGCAGTTTCAGATAGTTCCTCTTCCAGTCCTGTGGGCTCCTTCCAAGGGATGGCAGATTCTAGCAGCGGTACTCCTATTCTCCCAGGAGCAACTTTAATGCATCAGCAGCATCAGCGGCTGACAAAAAGACCTTCAGTTGATAGTGGAATCCATTTAGGTTCAGGCCAGTCTTCAGATAGCCTCCCATCTTTGCGACCAAGGGGGAGTAGCAAGTTAGGAAGTGGAAGGGAAACTCCAAAACTCTCACGttttgacCGCAGCATGTCATTGCCTCTAAGCTCACCTATGTCTGTGGTAGAGAGTTCCTATGACAGTGGTATATCAGATGGGAGGGATGCCATAAGGAACTCCCCAGTCAGGAGAATGGATTTTGCTCTCTGCGAGGTGGCAACGGGGCCCCGAAGCGAGAGCCCCATCATTGACGTGGAGGCTGTCTCAGATGAGGAACTGGAAGCCAAACAGAGCGTTGTAGGGGAGCAAGAAGTTCGAGTGTTAACTTTGGCAGAACAAATTATAGCTGCTATGCCAGAAAGGATAAAGAATGAAAGTGAAGACATGATGTTAGGGCATGACTGCAGTCCCTCGCAACCAGAGTCATCTACGGCAACCTCTGATTCCCTCAGTGAAGTGTTTATGGAACCCTTGCTGATGGATGAACCATCTTCTTCATATGAGCCTGTGgaatttaattttgagttcagcGACCATAACTACAGGTACTATGATGTTGGTACTCCATCTTCTTCTCTTAGTCCTGCATCTTCTACATGCCTTCAGTCTCCATGCTCCTTCACACTTGATTCACCATCCCCACCTCCTACAACTGCAGATTTTTGTGAGTTTTTCCAAGCTTCCAGCAGTCTGTTTGAAAAGGACTTCTCCAATCTCACACTCTCTGATCGAGAGCAGCGTGAGCTTTATGAGGCAGCCAAAATAATACAGAAAGCTTATAGATCATACAAAGGTCGAAAGAAGCTGGAAGAGCAGGATAAAGAGCGAGCTGCTGCAGTATTGATACAAAATTATTATCGCCGCTACAAACAGTATGCCTACTTCAAGCAGATGACTCGTGCTGCAATGGTGATACAGAATGGTTACCGCTCTTATTGTGAACACAAGAGGTTCAAGAAAAGTCAGGAGGCAGCGGTGTGCATCCAGAACTACTACCGCAGCTACAGGGAGCAGGGGGGGAGGGGAGGTAGCCGTGAGGGCACGCCGAACCCTGCGAGTAGTGGCCTCAAGTAA
Protein Sequence
MFADIYSQELREGTREEWRQASRNISLRSKTFPVFTSGRAQPSLPSNQPVGRAEGHAASPSHDSSCIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWGDKKEWTKEELVSQLKPMFFSEDEPDLNNELEISTAETVEAIVTQLMEKQRLARAAALTKQLECGCPDSTCADGKTCSHPMRRISAAKTGSSTSELTQSSNSRQAVVSMATLNSENNNQVSSTTGSGSMILTASSNNAANTTTSQRRDTLSLHSHHSHQQQAQHASSANSSTTSTPPLVLSLSQIQGGGGLLILNSSSASSSANPTTHHQSLVTSFVCSTNTAVATHHQTARSHHHHQQQQQQQQQQQHHHNKEQSKSTTIVIKQEAMETSSSPSSCCHQDSNTSNNNLNISNNNINKMDVTNGNATASAFEPVYKNIMRASTPSNSMSSAPPTPTKHMDTGGGGGEELSPYGDTVLVIGPNKASSADVTGGGFFNETLDLSQEDIQRTLSANMPLSCSAAELGPPGHHRHRQTGSGTITSAAGAHHVLASKSMGQGSSGDEMSPDDVIVSEINPMDFIDTCDVVVSPTQVDDDVFVNLDAFDMLGDFPELEILEPSAESNSGPTTANGSGANSGSNLDHGTPEPAPATPGSSSVSAVDKNSDQASPRMDYREGTANITDYSPEWAYPEGGVKVLVTGPWYSTTSPYTVLFDTFPVPTTLVQSGVLRCYCPAHEVGLATLQVACEGFVISNSVIFEYKKPVAREDRAAACEPKLERSSSDNLLKFTLLQRLEAMDDRLQIKQEPDGSDMVEGSALFNQSNFEDRLVSYCQEMTSRAWRSGEEVNPSWFSSHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGYTPLMWACARGHRETAILLYQWNHTALNVRNIAAQTATDCARSNTHEELAQEMERLEAAREKNNMTLLGSSSTSSPTSSTVLSSEISPALLTDTDSMMVVASSASPDISTLSPAGSVVSLASVASTARSHDGVFLRPGAVTRNESQKYKVLSLELHVNIPQSGSNGGTNSETAAVSDSSSSSPVGSFQGMADSSSGTPILPGATLMHQQHQRLTKRPSVDSGIHLGSGQSSDSLPSLRPRGSSKLGSGRETPKLSRFDRSMSLPLSSPMSVVESSYDSGISDGRDAIRNSPVRRMDFALCEVATGPRSESPIIDVEAVSDEELEAKQSVVGEQEVRVLTLAEQIIAAMPERIKNESEDMMLGHDCSPSQPESSTATSDSLSEVFMEPLLMDEPSSSYEPVEFNFEFSDHNYRYYDVGTPSSSLSPASSTCLQSPCSFTLDSPSPPPTTADFCEFFQASSSLFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRKKLEEQDKERAAAVLIQNYYRRYKQYAYFKQMTRAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRSYREQGGRGGSREGTPNPASSGLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-