Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_030765065.1
Location
CM060990.1:105317673-105326451[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.41 3.3e+03 1.1 0.1 21 46 306 333 295 333 0.81
2 5 7.2e-13 5.9e-09 38.7 0.3 1 46 339 386 339 386 0.96
3 5 1.4e-12 1.1e-08 37.8 1.9 3 46 394 441 392 441 0.91
4 5 1.2e-07 0.00096 22.1 0.0 1 43 447 489 447 491 0.97
5 5 5.7e-08 0.00047 23.1 0.0 4 42 499 538 496 539 0.89

Sequence Information

Coding Sequence
ATGGAGAAGTGCCCGATTGATGTAGAGAAAGCTCATTATGATGAGCTGTTGTATTTTGCATTATATGGTAAACCTGGAATCCTGAAAGATGACGACCCAGTGCTGCTCACATTTCAGAACCAGAGACTTCCACCAGAGAAGCAGATACCAGTGCCAGAAATAGAAACAGATGATCCAATTGTGCTAGATCTTCTGGGCAAAAAGAAACTGCCAGAGTCACCCGTAGTAGTAGAAAAGGTACCCGAGAAGTTGAAAGAAGACACAAAAGATGAAGACCTTCCAGTCTACAGACGCTCGTATATTGTGAATTTTGATTGGAGTGATGTAAAAGGAGAATACTGTTCTCTTGATTATGATAAGTATTTAGAAGTGGACGAGGAGAGACCAACTGCAAGAATGTGCAGGCTTCTAACAATGGTCATCTTCAAATTGCTCGTTTACCTCAAGAAGTATCTCGAGGATGTTCTTAAAAAGACTAGGTCAGATATGTCCACGATTcatgacaaaatatttgaattcAAATCTTCAGGAAGCATTGCTGCCCCTCGCAGACTGTCATGGTTGAACATgtatggaatgccatacttcaaaGATAGTGAGTACTTTCCTTGTCCACCAAATGAAGACATGCAGATGAAGAAATGGAACAATGAACTTTTGCTGAACGAGCTACACACTCCCTGTGACTGGAAAGCTGTCGATTATCGTAAACTGGAACAAGCAATTAAGGCTGAAGAAGTCATGAGACGCTCAGAGAAAGTTAAACATGACAcattaaaattatcaaaatctcTAGATGCAGCCAACAGTGAGGAGAAAAAAGCTGAACTACAACAGAAAATAAGTGCATTGCCATCCTTGGACAGGATCAAGGGCATGTCTCTAAAGGAATTGTGTGAAGATACAGAGTGGGAATATGATTGGCTCAAAATAGCAGCTCAAGACTTTCATGGTCTCAAACATCCTGATGAATGTAGAGCTGTTTGGCAGATATATCTTCATCCAAAAATAACTAGAAATGTTTGGACAGATGAAGAAAATGAAAGACTGAAGCAACTTGTTAAAGATTATAACTTCCAGAACTGGGAAGCAATAGCAGAAAAACTGGGAACAAATCGAACTCCTTTATTGGTGATGCAACATTATCAACGAAACCTTAACAAGGGTTTGATAAACAAGACATGGACCGAAGAGGAAGACAGGTTACTGGTGGAACTCGTAGCTACTTGCAGATTTGGTTCTCGCATATCGTGGAAAAAAATAGCACAGCGTTTGAAGAGCCATACCAAGCAACAAATATATAAGCGTTGGACGCGCCACTTGAATCCAGATTTATATAAGGTGCCCTTCACAGAAAGTGAGGATATGCTTCTGGTAGCAGCTGTACGCAGCTGTGGGTTCGATTACTATAAACTTTCggaattgtttccaaatcattcATGTCAGCAACTTCGTAACAGATACAGGGCGCTTACAAAGTTATATCCAAACACTTGGGATGATAGTAAGAATGAAAGGTTATTAACATTAGTTGAGAAGTTTGGAGAAGGAAAATGGAAAAAGATATGTGAATATTTTAGTGATCAGACTCCAGCCTCGCTGAAGGAACAATATGCCATACTCAAAGAGAGGAAGGAACGGTTTACTGAAGGTAACTGCAATGTAACAGAAAGTGAAGCTAAAGAGGAGGACACAGTTTGTGAGGAGCATAAGCTATGGAGAAAAGTTCAGCAAGTTTGTCCAGTTTTGAAGGAATGTGATAAATTGGACTCTAGTGgtttaaagaaattaaaggaaATGTTAATTAAAAAGACAAGAATACCACCCCAGAATATCACAACATTAACTCCCTTTGAAAGACAGTGTTCTACATACTTCAAATGTGTGAGTGATACAGCTGTGTACAAAACTGACCTGTATGAGAATGAGCAAACGTTTGAAGAACCTCATGTGCTGAAATATATACTGCATCTCCTACATGCAAAACTTCGGACTCCCAGTGAAGGTTTTATGTCAAATCATACTATACTTCAGCAGCTGCATGGAGAATCATTCATGGTTTCTGAAGTAAGACAGGAATTTGCTGAAGATCAGGTTGGTTTTAAGTACTGCTTGCCACCAAACGTTACTACATTGAGTGGTTTGTATTCAATAATGCTACATCGACAATATGTCCTAGACAAACAAGAACAGGAGAAGAAAGAGGAAATGCATGTTCAAGCTGGAGAGGCAGGACAGTTGTTTGAGGAAAGGTTTCGCTTTTTGTTTCTTTGGCCAGCACTTGCGACATTAGAACCACCTGCAATAGGACAAGTTCCTCCTATTGAGGATTCTGTAGACCCCAGTTTACTATACCCCATACCTAGAAAACAGAAGAGGAGCCCAACCAGGGTAGAGCTGCTCAGCATTTTTGggccaaaaaagaaacaaagTCGAGGCAACATTGGAAAGAAAAAACCAGCTATCTCCAAGCTCCCTTCCCTGAAAAGTAATGAACCCAACACCTCGCTCGCAGCTACTTCACCGCAGCCCATCGAAGCAGTCAACGCCTCTTCTCCGACCAGCTCAACCATTCAAGAAAGAAAAAGGTGTTCCAACTGTGAGCAACTAGTTGTGGGTTCCGAGGATGACCTGCCTGAGGAGATCACCTTCTTATAg
Protein Sequence
MEKCPIDVEKAHYDELLYFALYGKPGILKDDDPVLLTFQNQRLPPEKQIPVPEIETDDPIVLDLLGKKKLPESPVVVEKVPEKLKEDTKDEDLPVYRRSYIVNFDWSDVKGEYCSLDYDKYLEVDEERPTARMCRLLTMVIFKLLVYLKKYLEDVLKKTRSDMSTIHDKIFEFKSSGSIAAPRRLSWLNMYGMPYFKDSEYFPCPPNEDMQMKKWNNELLLNELHTPCDWKAVDYRKLEQAIKAEEVMRRSEKVKHDTLKLSKSLDAANSEEKKAELQQKISALPSLDRIKGMSLKELCEDTEWEYDWLKIAAQDFHGLKHPDECRAVWQIYLHPKITRNVWTDEENERLKQLVKDYNFQNWEAIAEKLGTNRTPLLVMQHYQRNLNKGLINKTWTEEEDRLLVELVATCRFGSRISWKKIAQRLKSHTKQQIYKRWTRHLNPDLYKVPFTESEDMLLVAAVRSCGFDYYKLSELFPNHSCQQLRNRYRALTKLYPNTWDDSKNERLLTLVEKFGEGKWKKICEYFSDQTPASLKEQYAILKERKERFTEGNCNVTESEAKEEDTVCEEHKLWRKVQQVCPVLKECDKLDSSGLKKLKEMLIKKTRIPPQNITTLTPFERQCSTYFKCVSDTAVYKTDLYENEQTFEEPHVLKYILHLLHAKLRTPSEGFMSNHTILQQLHGESFMVSEVRQEFAEDQVGFKYCLPPNVTTLSGLYSIMLHRQYVLDKQEQEKKEEMHVQAGEAGQLFEERFRFLFLWPALATLEPPAIGQVPPIEDSVDPSLLYPIPRKQKRSPTRVELLSIFGPKKKQSRGNIGKKKPAISKLPSLKSNEPNTSLAATSPQPIEAVNASSPTSSTIQERKRCSNCEQLVVGSEDDLPEEITFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-