Dtru114545.2
Basic Information
- Insect
- Deroplatys truncata
- Gene Symbol
- -
- Assembly
- GCA_030765065.1
- Location
- CM060990.1:350287369-350288607[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 1.7e-05 27.3 0.0 5 37 1 34 1 38 0.89
Sequence Information
- Coding Sequence
- ATGAAACAGGCGGTTTCATGCGTCTTAGAGAGTCAAATGACTACAAGAGCTGCGGCCGATCATTTTAATATTCCAAGAACTACActgcaaagaaaaacaaaatctgttTTAGGAAACCAGCAAACCATCATGAAAGCCCAGATGGGCTTTTTCAAACCAACGTTTGAAGAAGAGTTAGAATCAGTTTTACTAGAGCACATGAGAGATTTGGACTCGAGATTGTTTCCCCTAGCAAAAATCGAGTTCTTAAAGTTAGTCTATGATttggcagaaaatttaaaactgccTCACAGGctcaataaagaaaagaaaactgcaggAAAGGATTTCTATGCAAGTTTCATGAAGAGGCACCCAGAACTAAGTTACAGGAAACCTCAATCTACAAGTTTGATGCGTTGTGTCGGGTTTAATGAACCACAGGTTGAAAGGTATTTTAACGAACTGAAAGTCTTGCTTGACAAGCACTGCTTTCGTCCATCTAAGATTTTTAACGGTGACAATACAGGAGTTTCTTGCGTACATGAAAATGACAAGGTTATAACAGTGAAAGGGAAGCGCCAAGTTGGAAAAGTGACATCAGGAGAAAGGAGCCGTAATGTCACACTGATATTCTGCATGAATGCGACCGGACAGTTTATTCCTCCACTTTTCATTTTCCTCAGGAAAAGGATGAATGACTGCCTAATGATAGGTGCACCTGCTGAGAGTTGTGCCTTCCCAACTTCTAATGGATGGATGACAACTGAGGCTTTCCTTAAATGGCTCCAGCACTTCGTGACTTTTACACCTAGTGCAGAAGACCCTGTTTTGCTCATCGTCGATGGTCATGGAACGCACAAGGAGCTTGATGTCATTTCCTATGCTCGAACAAACCATATCCACATGCTATCTTTCCCACCCCATGCGACACACAAACTGCAGCCTCTTGACCGATCCTTTATGAAACCTTTCAAAAACTGCTACAATCATGCTTGCAGTTTGTGGATGAGGTCAAACCCTGGGGCTAGAATCAATGACTACAATATCGCAAAGCTAGTTGCAGATGCATACAAGCAAGTGTGTCGCCTAGATAAAGCAGAAAGCGGCTTCAAATGCACAGGAATCTACCCATTTGATCCACACATTTTCACTGATTTGGATTTTATGGGCAGTGCTCTTGCCAATATAGAACATCCATCAACCGTTGAGACCACTGCTGAAGCTGCTGCGACTACTTCGGGAACCCCCTTCAACTGA
- Protein Sequence
- MKQAVSCVLESQMTTRAAADHFNIPRTTLQRKTKSVLGNQQTIMKAQMGFFKPTFEEELESVLLEHMRDLDSRLFPLAKIEFLKLVYDLAENLKLPHRLNKEKKTAGKDFYASFMKRHPELSYRKPQSTSLMRCVGFNEPQVERYFNELKVLLDKHCFRPSKIFNGDNTGVSCVHENDKVITVKGKRQVGKVTSGERSRNVTLIFCMNATGQFIPPLFIFLRKRMNDCLMIGAPAESCAFPTSNGWMTTEAFLKWLQHFVTFTPSAEDPVLLIVDGHGTHKELDVISYARTNHIHMLSFPPHATHKLQPLDRSFMKPFKNCYNHACSLWMRSNPGARINDYNIAKLVADAYKQVCRLDKAESGFKCTGIYPFDPHIFTDLDFMGSALANIEHPSTVETTAEAAATTSGTPFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00434759;
- 90% Identity
- iTF_00434783;
- 80% Identity
- -