Dtru076888.1
Basic Information
- Insect
- Deroplatys truncata
- Gene Symbol
- -
- Assembly
- GCA_030765065.1
- Location
- CM060986.1:45116210-45128075[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00031 0.41 13.2 0.0 6 34 28 55 26 59 0.80 2 4 6.2e-11 8.2e-08 34.7 0.0 4 39 77 111 74 114 0.91 3 4 2.1 2.7e+03 1.0 0.0 6 22 117 140 115 147 0.87 4 4 4e-06 0.0053 19.3 0.0 2 40 160 198 159 202 0.91
Sequence Information
- Coding Sequence
- ATGACAAAAGCCTGTCTTACTTGTTGTCTTGCAGACAACAGAGTGCTGTATCCCCGGGTACGGCGAGACAGGTTGTTGCTAGAACAAGCAATGGATCGAGTCCTAGCTGGAGCCTCTGTCATGAGCGTGGCCAGGGATTACAACATACCTCGTTCTACTCTCCACAATTCCCAGTTTGGACCACGAAGGCGAATTGGCAGGCCACCACTACATCCATGGACCCAGAAAACAATTCAGAGTGCAATAGAACGAGTGTTGGCTGGAACTTCAGTTCGCAAAGTGGCTTCCAGGTTCAACATTCCACGTTCCACATTGCAGAACTACATGAAACGCAGTGACCTGAATGCAGCTGAAGCATTGCAGAATGTGCTTTGTGTTTTATCACCAAGTGGTGAAGGGGAGACAACTATTACAAAGGCAGTGACCATAACAGGAACGCCTGTTACTGCACCACCAGCAACAAGAATTCGGCGTTCAGAACAAGAATTGCAGAAGGCTGCAGAATGTGTACAAAAGGGCATGACTTTCCAGAATGTTTCAGACATCTTCAAAATACCTATATCGACAATCCGTTTCTACATGGCACGACGTGGCATTCTGCCCCAGCGCCGTAGAGGCCGTGCTGCACTGAATCAGAGTGCAGGTGTACCTTCACCACACTACCTCACCATGCAGTTCAAGTTACCTGACATGGGTAACCCACCAAAACTTCCTTCTCCATGA
- Protein Sequence
- MTKACLTCCLADNRVLYPRVRRDRLLLEQAMDRVLAGASVMSVARDYNIPRSTLHNSQFGPRRRIGRPPLHPWTQKTIQSAIERVLAGTSVRKVASRFNIPRSTLQNYMKRSDLNAAEALQNVLCVLSPSGEGETTITKAVTITGTPVTAPPATRIRRSEQELQKAAECVQKGMTFQNVSDIFKIPISTIRFYMARRGILPQRRRGRAALNQSAGVPSPHYLTMQFKLPDMGNPPKLPSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -