Basic Information

Transcription Factor Domain

TF Family: COE
Domain: COE domain
PFAM: AnimalTFDB
TF Group: Helix-turn-helix
Description: This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0083 3.8e+02 2.0 0.0 294 311 34 51 30 56 0.86

2 11 0.01 4.8e+02 1.7 0.0 294 311 61 78 58 83 0.87

3 11 0.01 4.7e+02 1.7 0.0 294 311 88 105 85 110 0.87

4 11 0.01 4.7e+02 1.7 0.0 294 311 115 132 112 137 0.87

5 11 0.01 4.7e+02 1.7 0.0 294 311 142 159 139 164 0.87

6 11 0.01 4.8e+02 1.7 0.0 294 311 169 186 166 191 0.87

7 11 0.0083 3.8e+02 2.0 0.0 294 311 196 213 192 218 0.86

8 11 0.0083 3.8e+02 2.0 0.0 294 311 223 240 219 245 0.86

9 11 0.0081 3.7e+02 2.0 0.0 294 311 250 267 246 273 0.86

10 11 0.0088 4.1e+02 1.9 0.0 294 311 277 294 273 301 0.86

11 11 0.0096 4.4e+02 1.8 0.0 294 311 304 321 300 326 0.87

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0083	3.8e+02	2.0	294	311	34	51	30	56	0.86
2	11	0.01	4.8e+02	1.7	294	311	61	78	58	83	0.87
3	11	0.01	4.7e+02	1.7	294	311	88	105	85	110	0.87
4	11	0.01	4.7e+02	1.7	294	311	115	132	112	137	0.87
5	11	0.01	4.7e+02	1.7	294	311	142	159	139	164	0.87
6	11	0.01	4.8e+02	1.7	294	311	169	186	166	191	0.87
7	11	0.0083	3.8e+02	2.0	294	311	196	213	192	218	0.86
8	11	0.0083	3.8e+02	2.0	294	311	223	240	219	245	0.86
9	11	0.0081	3.7e+02	2.0	294	311	250	267	246	273	0.86
10	11	0.0088	4.1e+02	1.9	294	311	277	294	273	301	0.86
11	11	0.0096	4.4e+02	1.8	294	311	304	321	300	326	0.87

Coding Sequence: ATGGAGCAGAACGGTGGTCTCTATACTTGCCAAATACTTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTTATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTAATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTCATGGATTGTTGATATCTTGCCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTCATGGATTGTTGATATCTTGCCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTCATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTAATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTTATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTTATGGATTGTTGATATCTTGCCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTTATGGATTGTTGATATCTTGTCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGTCTCATGGATTGTTGATATCTTGCCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGTCTCATGGATTGTTGATATCTTGCCACCTAATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTCATGGATTGTTGATATCTTGCCACCTATTAAAGTTCAAGGTCCACCAGAACATGAACCTCTCTCAGCAGAATATGAGCCTTATGGATTGTTGA
Protein Sequence: MEQNGGLYTCQILKVQGPPEHEPLSAEYEPYGLLISCHLIKVQGPPEHEPLSAEYEPNGLLISCHLIKVQGPPEHEPLSAEYEPHGLLISCHLIKVQGPPEHEPLSAEYEPHGLLISCHLIKVQGPPEHEPLSAEYEPHGLLISCHLIKVQGPPEHEPLSAEYEPNGLLISCHLIKVQGPPEHEPLSAEYEPYGLLISCHLIKVQGPPEHEPLSAEYEPYGLLISCHLIKVQGPPEHEPLSAEYEPYGLLISCHLIKVQGPPEHEPLSAEYESHGLLISCHLIKVQGPPEHEPLSAEYESHGLLISCHLIKVQGPPEHEPLSAEYEPHGLLISCHLLKFKVHQNMNLSQQNMSLMDC

Sequence clustering based on sequence similarity using MMseqs2