Basic Information

Gene Symbol
ARID5B
Assembly
GCA_030765065.1
Location
CM060988.1:210151086-210227554[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-25 1.1e-20 76.6 0.0 1 89 182 268 182 268 0.95
2 2 1.4 3.9e+04 -2.1 0.0 15 35 375 396 367 396 0.68

Sequence Information

Coding Sequence
ATGCTTGGTCATTGCAAAGTTCTTCTCGGGCCTCCCTGCTGGATAGACTTCGTAGTTCCGCCAGAGGGGAGCCTCTCTGAGCAGCAGGCCGACGAGGAGAGGGAGCAGACGTCTGCAGTCGTGGTGTTGAGCTTTCCACGCTATTGTCGATATAGAGGCATCATCAAGCGTCTAGAAGGAGTGACCAACAAATGGCTAAGGAATGCCCTCATAGTAGCTCTAGGGGGCTTTGCTGTCCCTTGTCGCAATACTCGCATTCTCTTCTGTAAGGACACATTTGATTACCCAGACCTTGAAGGTCACGAACTACTCTGCAACCATCTTGCTCCGAACTTAAAAGCTCGGCCAAGAAGAAAACGCAAAAAGAGAAGTGTTTCTCCTGGAGGCTCAGAATCCAATGAGTCGGAAGAATCTTCCTCTGTATCAACGGCTTCCACAATAACAAAGAGTAAACCTGTGTCAGTAGGCAACGGGAAGAATGGGTTGCGATGTAACAATTTGGTGCAGCCGAGACGAAGCGTAAGGAGTGGTAACCCAAGTCCCGAAGAAAAGGAATTCCTGATAAAGTTACATCGCTTCATGAAGTTGCGGCAGACGCCCATCGGTCGAGTGCCTCACCTGGGATTCAAAGAGATTGATCTGTTTGCATTCTTTACAAAAGTTCAGAAACTTGGAGGTTATAATGCAGTTACTGCAAATCGCATGTGGAAGCCCATATATGACGACTTGGGAGGTCATCAGGGGAGTACAAGTGCTGCCACCTGTACGCGGAGGCATTATGAGAGACTTCTGCTGCCATATGAGAAGAGTGTCAAGAGTGATGAGGCTAAAGAACGAAGACGAAGCAGATCTCAGGAAGATTCACCAACAAAACTGGAGGATATGGATGTGAAACCACCAGTGACGACAAGTTGTAAGAATGGAGTGACACCTGAAGGGAAGACGTCCTCTCTCAGGAGCGTCAGAACGAAGGCAGACAAGAGCCAGCAAGATGGCAGCATGTCGCAGCAACCGAAGGATAAAGAGAACATACCATTACTGAACAGGACAGAGCTGGAAATCAAGCAGGAACCGGGCAGCAGTGAACGACCTACGCCAGAGCTGATAGACCTTGTCTCGGAACAGGACTCATCACCAACCAAAGCGCCAGTGCCGGCGTTAAAGAAACGTAAGCTGGACATTCTTAAGGAAGGTGGTTTGGAAGTGACTGCCATAACACCCCCATTGTCAGCATCAACGTCAATTGGTTCTGTTACAATAACGCCGGACAGACGACCTTCAGTCATCCAACATGCGGCTCCTGCCCTGGGGCAGGTCTCCATAACAGTAACTCCAGACCTTAGCCACATGCTTGGATCACCACCAGCTGATCTAACGTCGTCATCTTCCACACCCTCCCCGACCGCAGGATGTGACTCAAGGCAGAATCCATATGTGCGATCTCAAACCCCAAGTTCAAACAGTAGTTCTGATGGGTGGGCTCCTCCCCGTGTAATGCAGTCTCGCTCAATATATGCGCATTCTGAGAAAACTGTGTATGGTAACCCAAAGGACGCCATTGAACCACCATCTAGTTTGTTGTATCGTAGAAAAACGTGCATGAAACCGGCGGCAGTAGCAACGGTAACGGCAGCACCTCCTGGTGGTGAAGTTCTTGACCTGCGGGTCAGCAATTCACGGAAACCTGCCATTAGTATTAGCAGAGTGTCAGTAGCGCCATCTCCTCAGAACAATGTAAGGAATACTGTTAGGCTGCCACAGTCAAAAACCAATGGTGTCTCTCCGTTTCCCCTTATAGATGGACGTGCAATGGTGGGCTCCAATCTGGAGATAACGGTTGTAGATGTTCCCAAATCCTCGTCAGTACTACCTCAGAGGAGCATGTCACAGCAACAGCAGCGGAGGGCAATAAACGCCAAACCTTCAATATCTGCTCGTCCGCTACCTAACAATAAACATAGCAGTCTCACAATATCTCACATTTCACCCCACAGAAACAACAATGCTCAGTTGGTGATACCCAATCCGTACGGGTCGACAGGCAGCAGCTCCAGATCACGCCAGCAGCCACCAAGTGCTACGCCAACATCATCGCAGCCTGCTACACCCACTTCAAGTTCCATGCCATACCTACCATCAAATTCGTCTCTGTTTCCAAACTTTTTGTCGCAGTTAACGTCAACTTCTGGAGGGGGCAACACCTCGAAGAGCGCCTCTCAATACCATCTTCCATTGCTAGATCCCGTGTATTACTCTGCTCTGTACGGAAACCCAGGGTTATACCCCCAATcagcagcagctgctgcagcGGCATTTCTCTCACCACCAATGTTTGCGCCAACAGCGGAACAGTTGCAATTGTATAAAGAGTTAATGAACCATCATCATGCAAATCCTCACTTTACGCCACAAGGAAGTACTAGTGCCATCGGTAGTATCCTAGGTCTGCCCCGTGATGGTTCAACGTCAATAACTCCAATTGGTCGCTCGTCCACCCCCACCTCCAAATGA
Protein Sequence
MLGHCKVLLGPPCWIDFVVPPEGSLSEQQADEEREQTSAVVVLSFPRYCRYRGIIKRLEGVTNKWLRNALIVALGGFAVPCRNTRILFCKDTFDYPDLEGHELLCNHLAPNLKARPRRKRKKRSVSPGGSESNESEESSSVSTASTITKSKPVSVGNGKNGLRCNNLVQPRRSVRSGNPSPEEKEFLIKLHRFMKLRQTPIGRVPHLGFKEIDLFAFFTKVQKLGGYNAVTANRMWKPIYDDLGGHQGSTSAATCTRRHYERLLLPYEKSVKSDEAKERRRSRSQEDSPTKLEDMDVKPPVTTSCKNGVTPEGKTSSLRSVRTKADKSQQDGSMSQQPKDKENIPLLNRTELEIKQEPGSSERPTPELIDLVSEQDSSPTKAPVPALKKRKLDILKEGGLEVTAITPPLSASTSIGSVTITPDRRPSVIQHAAPALGQVSITVTPDLSHMLGSPPADLTSSSSTPSPTAGCDSRQNPYVRSQTPSSNSSSDGWAPPRVMQSRSIYAHSEKTVYGNPKDAIEPPSSLLYRRKTCMKPAAVATVTAAPPGGEVLDLRVSNSRKPAISISRVSVAPSPQNNVRNTVRLPQSKTNGVSPFPLIDGRAMVGSNLEITVVDVPKSSSVLPQRSMSQQQQRRAINAKPSISARPLPNNKHSSLTISHISPHRNNNAQLVIPNPYGSTGSSSRSRQQPPSATPTSSQPATPTSSSMPYLPSNSSLFPNFLSQLTSTSGGGNTSKSASQYHLPLLDPVYYSALYGNPGLYPQSAAAAAAAFLSPPMFAPTAEQLQLYKELMNHHHANPHFTPQGSTSAIGSILGLPRDGSTSITPIGRSSTPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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