Basic Information

Insect: Dermolepida albohirtum
Gene Symbol: -
Assembly: GCA_031893035.1
Location: JAVIWB010005265.1:52922-55175[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00023 0.042 15.4 0.4 2 23 88 109 87 109 0.92

2 14 0.0019 0.34 12.5 0.1 2 23 158 179 157 179 0.95

3 14 0.26 48 5.8 8.9 1 23 185 207 185 207 0.82

4 14 3.7e-06 0.00067 21.0 1.1 1 23 215 237 215 237 0.99

5 14 2.9e-08 5.2e-06 27.7 0.5 1 23 242 264 242 264 0.98

6 14 0.0018 0.32 12.6 4.2 1 23 270 292 270 292 0.97

7 14 8.9e-07 0.00016 23.0 0.6 1 23 298 320 298 320 0.97

8 14 0.00054 0.098 14.2 1.0 1 23 326 348 326 348 0.97

9 14 5.4e-07 9.9e-05 23.6 2.3 3 23 356 376 354 376 0.96

10 14 1.4e-07 2.6e-05 25.5 0.4 2 23 382 403 381 403 0.98

11 14 2.8e-05 0.0051 18.2 2.1 1 23 409 431 409 431 0.98

12 14 5.4e-05 0.0098 17.4 0.6 1 23 437 459 437 459 0.99

13 14 2.6e-07 4.7e-05 24.7 1.4 1 23 465 487 465 487 0.99

14 14 0.5 92 4.9 0.6 2 19 497 514 496 516 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00023	0.042	15.4	0.4	2	23	88	109	87	109	0.92
2	14	0.0019	0.34	12.5	0.1	2	23	158	179	157	179	0.95
3	14	0.26	48	5.8	8.9	1	23	185	207	185	207	0.82
4	14	3.7e-06	0.00067	21.0	1.1	1	23	215	237	215	237	0.99
5	14	2.9e-08	5.2e-06	27.7	0.5	1	23	242	264	242	264	0.98
6	14	0.0018	0.32	12.6	4.2	1	23	270	292	270	292	0.97
7	14	8.9e-07	0.00016	23.0	0.6	1	23	298	320	298	320	0.97
8	14	0.00054	0.098	14.2	1.0	1	23	326	348	326	348	0.97
9	14	5.4e-07	9.9e-05	23.6	2.3	3	23	356	376	354	376	0.96
10	14	1.4e-07	2.6e-05	25.5	0.4	2	23	382	403	381	403	0.98
11	14	2.8e-05	0.0051	18.2	2.1	1	23	409	431	409	431	0.98
12	14	5.4e-05	0.0098	17.4	0.6	1	23	437	459	437	459	0.99
13	14	2.6e-07	4.7e-05	24.7	1.4	1	23	465	487	465	487	0.99
14	14	0.5	92	4.9	0.6	2	19	497	514	496	516	0.92

Sequence Information

Coding Sequence: ATGTATGGAGATGGCCTACCAAATAGAGTATGTTGTGATTGTgcaaaaaaagttgaaattgcatatattttaaaattaaaatgccaAGAATCTGACTTTACTTTAAgacagtatttaaaaaataaacctcTAGAAGTCAAACATACGCAATCTGCAGAACAGGATGGTAAACTTTCTCACTTTATTGAATCTAATGATGATTTTAACGACAATAATTCCACAACAGACATTTTGTTAGATAAaagtatatatcaatatattcattgtgaaatttgtgaaaagagtTATGAATCAAGTGCAGATCTAGAAAAACACAAAGCCGATCATAAcacaaaaagaaagaattttaagCCAGAAGAGCCTCATAAACAAAACAGTTGTGAGAAAGATATTTGTTCAACTACAGCCTTTGACAAAATtataggaaaagaaaataattcaaatttgcaAAAAGACAGTGCAAAGAAATTGATATGTACagtgtgtaataaaatttacttaaaagctTCAAATCTGTCTGCTCATATGGGTATGCACACTGGAAATAAACCTTTTGAATGTAAAATATGCGGAAAATGTTTTACTCAAGGTCGAGCCCACGCTTGTCATATGAGAACACATTTAAAAACACTCGATAAGCCATATAAATGTAGTGTATGCAATAAAGAATTTGCTGAAAATTCACAATTATCAGTGCATACAAAAAAACATACTACTGATACATTTAAATGTGCAGTTTGTGGTAAAAGTTATTCTAACTCTGGAAATCTAAAATCTCATATAAGATTGCATACAGGTGATAAGCCTTATGCCTGTCACTTATGTGGTAAAAAATTTGCTCAAAGTAATGCTCACAGCTATCATATGAAAACACATTTAGGTGAAAAACCATTTGCATGTAACTCTTGTCCAAAGACATTCACCACCAATGGCCAACTTGTTAATCATCAAAGATTGCATACAGGAGAGCGTCCGTTTGCTTGTGCCGTCTGTCCAAAGAAGTTCACGCAAAAGATCGCTCATAAAATTCACATGATGACACACACAGGAAATAAGCCGCATTTATGTAGTATATGTGGAAAGAAATATTCACAAAGTAGTCAGTTAGTGCAACACATGAAATCTCATACAGGAGAAACTCAACAATGCAATATCTGTGGCAGAAGTTATTCTACAATGGGTAACCTTTCAGCCCATATGAAGACGCATACTGGTATAAAGCCTCATGTTTGTGCTGTTTGCCATAAGGGCTTTTATGTAGCTAATAAACTGGCCAAACATATGCGAACCCATACCGGGGAAAGACCGTACAGTTGTACAATATGTCTGAAAAAATTTGCTACTTCAGATGTAATGAAGGTACATGTTCGCACACATACAGGAGAACGACCTTATCGCTGTCAGCAATGTTCTAAAGGTTTTATAAATAGCTCTCAATTGACAGTTCACATGAAATCTCACGGTgccaaaaataatgaaacaaatctCACATGCAATGTTTGTTATCTGCATTTTGACAATAATCAAGCCTTCTTAGAACATTCTACAAATTGTAATAATGGTGAAAAAGAATCGCATCACACATTTTTCGCTAATGAAGCTGTAATTAGTGATTTAGATCTCAAGTGA
Protein Sequence: MYGDGLPNRVCCDCAKKVEIAYILKLKCQESDFTLRQYLKNKPLEVKHTQSAEQDGKLSHFIESNDDFNDNNSTTDILLDKSIYQYIHCEICEKSYESSADLEKHKADHNTKRKNFKPEEPHKQNSCEKDICSTTAFDKIIGKENNSNLQKDSAKKLICTVCNKIYLKASNLSAHMGMHTGNKPFECKICGKCFTQGRAHACHMRTHLKTLDKPYKCSVCNKEFAENSQLSVHTKKHTTDTFKCAVCGKSYSNSGNLKSHIRLHTGDKPYACHLCGKKFAQSNAHSYHMKTHLGEKPFACNSCPKTFTTNGQLVNHQRLHTGERPFACAVCPKKFTQKIAHKIHMMTHTGNKPHLCSICGKKYSQSSQLVQHMKSHTGETQQCNICGRSYSTMGNLSAHMKTHTGIKPHVCAVCHKGFYVANKLAKHMRTHTGERPYSCTICLKKFATSDVMKVHVRTHTGERPYRCQQCSKGFINSSQLTVHMKSHGAKNNETNLTCNVCYLHFDNNQAFLEHSTNCNNGEKESHHTFFANEAVISDLDLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -