Dalb012876.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dermolepida albohirtum
Gene Symbol
-
Assembly
GCA_031893035.1
Location
JAVIWB010002362.1:986128-1006111[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00068 0.12 13.9 0.7 1 23 163 185 163 185 0.98
2 16 6.9e-06 0.0013 20.2 4.0 1 23 190 212 190 212 0.98
3 16 0.00011 0.019 16.4 6.3 1 23 218 240 218 240 0.97
4 16 0.00033 0.059 14.9 0.6 1 21 246 266 246 267 0.95
5 16 8.2e-06 0.0015 19.9 0.5 1 23 274 296 274 296 0.97
6 16 6.9e-05 0.013 17.0 0.3 1 23 478 500 478 500 0.97
7 16 0.00032 0.057 14.9 7.2 1 23 506 528 506 528 0.97
8 16 7.6e-05 0.014 16.9 7.9 2 23 535 556 534 556 0.94
9 16 0.0054 0.98 11.1 3.1 1 23 562 585 562 585 0.92
10 16 0.00028 0.051 15.1 3.5 1 23 598 620 598 620 0.98
11 16 7.1e-06 0.0013 20.1 5.0 1 23 626 648 626 648 0.98
12 16 1.4e-06 0.00025 22.4 0.5 1 23 655 677 655 677 0.96
13 16 8.5e-06 0.0015 19.9 1.3 1 23 683 705 683 705 0.98
14 16 8.8e-07 0.00016 23.0 0.5 3 23 713 733 711 733 0.96
15 16 1.7e-05 0.0031 18.9 0.2 1 23 739 761 739 761 0.99
16 16 0.19 34 6.2 0.8 1 23 766 789 766 789 0.95

Sequence Information

Coding Sequence
ATGGAGTGCGAacaaatagatttaaataatgTCTGTCGAACCTGTAAAAATGAATCCCCCGAAATGAAGTCCCTCTACCATAGAGACTCCGAGAGCGGAAAGGAAAATCCCCGTTTAGACGAGATGCTAATGGCATGTACATCCGTACAGGTTAGTAACGACGACGGTTTACCGAAAATAATATGTCGATCATGTTTCGTGCAATTAAAAAATGCGTATTTCTTCAAAGAACAATGCGAAAAGACAGACgtgtttctaaaaaattatttggaaaactTAAGAAAAGAAGATATAAAGGAAGAAATGCATTTAAATGATGGAGAATTTGTAACAAATGTTGATGAAATTGAGTCATCACTGAATGATACCAATATTCGTGATAAcaatattacacaaaatattaaggCTGATCCTGAAGTTCAAGCAGAAGAATCGCAACAGAAGGATATGGACTATGTTCAGATGGTTGATGATAATCTTACAATTTTCGAATGCAGCACCtgctctaaaatattttttaccttAGAAGGCCTGAGGGGTCACAAACGAATTCATACTGGTAGGACATTCAAATGCAAACAGTGCGATAAATCTTATATTCGATTAAATCATCTTCAGAGGCATGAATTAACGCACAATAGTAACAAGGTACACATTtgcaaaatatgcaataaaacgCTAACCAGATTCCAACATTTAAAGCGGCATTTAATGACACACTTAAAGGAAAAGCCTTACAGTTGCCCGACTTGCAATCGGGGATTTAACCGCGTTGAACACTTTCAAAGTCATGTCAAAATCTGTAAAGGCGAAAAAGTTTTCATTTGTGATATTTGTAACAAAACTTTTAATCGCGAAATTAGTTTAGAAGTACACAAACGATTGCACGAAAATAAGTTACCTGTTCTACTGACCTTAGAAAATTTAGATAATGTCGAAGAACATTATGTACAAATAGATTTTGATGATAAGATGGACGAATTTCCGATTCAATCCGATGACGCTGATGAAGATGATGAAGATATTGAAGACTTAGATATGGGCGAAGATACTATGGAACCTGAAGTGCAGGTTTCCGAAAATAACGATcaggataaaattgatgaaatagcgcaaattacaaatgaaatttatgcCGAAGAAGATCCACCTGAAATGCTAGTAGAGAAGGCTATCATCGAAAAcgaaatatacaaagaaaacgagGAGGCGCAAGATGCGGAAAGTACTGCGGAAGCAGATAATGGAAATGATTATGAATCAGATGTAAGTACACATTCAGAATATTTACCAACGAAACCATCACCGCCAAAAATAAAGAAGGTTCGAGGAAGGCCTCGTAAATATCCGGTTTCATTTAAACATACGGGCAGACCTAGAGGACGACCGTCTTTAAAGTCAAAAATTAAAGCCGATTCGGAAAACGAAAACTACTCCTGTCCGCAATGCAAAGAAGTTTTCCCGAAGATGAGTTTGCTAGAGAAACACGTCGATAAACACGATGGCCTTAGAATACATGAGTGCGAGACCTGCCATAAAAAGTTCAACAGATTGAACAGCCTTAAGAGACATAAGATGTCGCATGTGGATGTTAAACCGTTCTTGTGCATGACTTGCAGGAAATGTTTCTCGAGAAGAGACCACCTGCAAAAACACATGAAGCTACATACGAGCACGGAAGTGCATACCTGTGATCTCTGCCAGGCTGTGTTCACTAAAGAGGAGAGTTTGACCAGACATAAAGCGCATAAGCATGATATAGgtGAAAAAATCGTGATGAGTGAGAAGAAATACAAGTGCCAGTACTGTCAAAAGAGCTTCACGACAGAAAAGTACCGAGATTCTCACATGAAAGCCCATTTCGGCGACAAGAAATTCCAATGCAGAACTTGCGAGAAAACATTTATATCTAAATCTCATCTAACGGAGCACATGAAATTTCACAACGACAGTTCTAAGAAGTTTTTGTGTTCTGAGTGTGGCCAGAGGTTCATTAGGAATGATTATCTGGTGATTCACATGAGAAGGCACCGGGGCGAAAAGCCTTTCAAGTGTAAATTTTGCGGTAAAGGTTTTCCACGGACAACAGATCTGACGGTACACGAACGGTATCACACCGGCGAGAAGACGCATCTCTGTGTTATTTGTGGAAGAGGTTTTGGAAGGGCGTACAACTTGACAGTTCACATGCGTACACATACGGGCGAAAAACCATATCGTTGCACGTATTGTGATGCAGCGTTCGCTCAAGGTAACGACTTAAAAGCACATGTCCGGAGGCATACCGGGGAAAGATTTCACTGTGATCTTTGTCCGGAGACTTTCCTTATGGGTTACCTACTGACCCAACACAAGAGGGTCGTACATGGTTTGAATATTGTTAGTAACATCAGAAGATTACAGCCCATCAATAAAATCAACTCTGACGATCCCCCACCAATAACCGTTCCATTGCCAGTACCCGTCGTCGTGTCGAGTGCTGTTATAAGTGATCCCCtacaaatacaagaaaatgaTATGCCTGAACTGAAGCAAGAataa
Protein Sequence
MECEQIDLNNVCRTCKNESPEMKSLYHRDSESGKENPRLDEMLMACTSVQVSNDDGLPKIICRSCFVQLKNAYFFKEQCEKTDVFLKNYLENLRKEDIKEEMHLNDGEFVTNVDEIESSLNDTNIRDNNITQNIKADPEVQAEESQQKDMDYVQMVDDNLTIFECSTCSKIFFTLEGLRGHKRIHTGRTFKCKQCDKSYIRLNHLQRHELTHNSNKVHICKICNKTLTRFQHLKRHLMTHLKEKPYSCPTCNRGFNRVEHFQSHVKICKGEKVFICDICNKTFNREISLEVHKRLHENKLPVLLTLENLDNVEEHYVQIDFDDKMDEFPIQSDDADEDDEDIEDLDMGEDTMEPEVQVSENNDQDKIDEIAQITNEIYAEEDPPEMLVEKAIIENEIYKENEEAQDAESTAEADNGNDYESDVSTHSEYLPTKPSPPKIKKVRGRPRKYPVSFKHTGRPRGRPSLKSKIKADSENENYSCPQCKEVFPKMSLLEKHVDKHDGLRIHECETCHKKFNRLNSLKRHKMSHVDVKPFLCMTCRKCFSRRDHLQKHMKLHTSTEVHTCDLCQAVFTKEESLTRHKAHKHDIGEKIVMSEKKYKCQYCQKSFTTEKYRDSHMKAHFGDKKFQCRTCEKTFISKSHLTEHMKFHNDSSKKFLCSECGQRFIRNDYLVIHMRRHRGEKPFKCKFCGKGFPRTTDLTVHERYHTGEKTHLCVICGRGFGRAYNLTVHMRTHTGEKPYRCTYCDAAFAQGNDLKAHVRRHTGERFHCDLCPETFLMGYLLTQHKRVVHGLNIVSNIRRLQPINKINSDDPPPITVPLPVPVVVSSAVISDPLQIQENDMPELKQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-