Basic Information

Gene Symbol
CAMTA1
Assembly
GCA_031893035.1
Location
JAVIWB010006495.1:45874-80687[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-35 6.7e-31 107.5 1.5 40 116 2 76 1 76 0.97
2 2 0.1 4e+03 -1.4 2.6 12 87 1213 1294 1207 1301 0.67

Sequence Information

Coding Sequence
ATGTTGCTTTACAGTCGAAAGAAAGTGAGATACCGCAGAGATGGCTATTGCTGGAAGAAACGAAAAGATGGAAAGACCACAAGAGAGGACCACATGAAATTAAAAGTTCAAGGCACAGAgTGCATATACGGCTGTTACGTTCATTCCGCTATATTACCGACCTTCCACAGAAGATGCTACTGGCTTCTTCAGAATCCGGATATAGTTTTAGTACATTACTTAAATGTGCCCTACCCAGACGATAACAAACTAGCGGTGATCACCCCTAGTTTAGCTTTGTGGGCGGATAAGAAAGAATGGACGAAGGACGAGCTAGTTTCGCAATTGAAACCCATGTTCTACAGCGAAGACGAGCCCGATTTAAACAACGAATTAGAAATATCGaattttaaattacaaactgCGGAAACAGTCGAAGCAATAGTGAGTCAATTAATGGAAAAGCAAAGAGTTGCCAGACAAGCAGCTCTTGTAAAACAACTCGAATGCGGTTGTCCAGATTCAACATGCGCCGATGGGAAAACGTGCTCACATCCTATGAGACGAATCAACGCCAAAATGGAAATATCGAATTCACCACTACCTTCCTCCAGTTCCAATTCGCGATTAAATGTCAGTTCAGAGAACAACAATCAGGTGTCTTCAACAACGGGCTCCAGTAATTCTATGGTACTCACAAACAACCATTCGCCGAGAGTATACTCACGTGAAAACAGGAATCAGCATAGTCATGTTAGCAGGGATTCAAATGCTGCAAACACACCACCCTTGGTGTTCAGTTTATCGCAAATTCAAGGTGGAGGAGGATTATTGATATTGAACAGTAACTCTTCCACATCATCGAATTCAAACACGCGCCAGTCATTAGTTGCTCCGGTTTCTGTAGCTAATTTCGTCTGCAATACGAATACCAGAAGCATGTCCAAGAATAGCGATAATCAAAAAAATCCACCGCTAGTTTTAAAGCAAGAAGCCATGGATACAAACCCAACATCTTGTTGCCGTCAAACCAACCAGATAGTTAACGGAAAGGTCCTCAACCAAAGAGATAACAAAATGGACGTGTCTAATGACAATCTTAGACAATCAGTTTTCGATTATCGACGATCAGAAAGTATCATAACACATCAAACAGAAATGGTAATGTCATCACCATCAACGCCTTCCAAACACATGGATACTACTACACAAGAGGACGTAAACGAAGATTTCAAACAGAATTACTGCAACGACACCGTCGTTCTGCTGGGCACGGACTCTAGAGGATCTCTGATCAGCAAAAGCGACTCGTCTTCCATCATAAACGGAGGTTTCTTCAACGAAACTCTGGATCTCTCGCAGGAAGACATCCAGAGGACCCTTTCCGCCAATATGCCACTGTGTTCAAGCGACTTGGAAACTCACCAGGCCAACGGCGCCGACGTGAACGCCACACAAGCTGCAACGATCAGCAAGCACGTCTCGCACCACCAAAACAACACCTTAGAGAACGACCTGAACCCCATGGATTTTATAAGTAACTGTGATGTGGTGGTGTCTCCCACGCATGTCGTCGACGATGATGTTTTTGTCAATTTGGATTGTTTTGATATGCTCGGAGAATTTCCAGATTTAGAAGTTTTAGAGTCCGGACATACTGGACTATTAGATGTTAATCCGTCCGATGGTAGCAGAAATGACAAAAGTCATTCAGATCAAATAAACAGCGGTAATCTTCAGATGGAGGGAAGCGCTAAAATTACTGATTATTCACCAGAGTGGGCTTATCCTGAAGGAGGCGTGAAAGTTTTAGTTACAGGACCTTGGCACACAAATGGACCCTACACTGTACTCTTTGACGCGTGCGCAGTTCCAACGACGTTAGTTCAAAGTGGAGTGCTGAGATGCTACTGCCCAGCTCATGAGGCAGGATTAGCAACACTTCAAGTCGCATGCGATGGATATGTTATATCAAATTCTGTGATATTTGAATACAAACTTCCACCGAGAGAAGACCAGCTTACAACCCAAGAACCAACAGTCGAGCGATCCAATGATAATTTACTGAAATTCACCCTTTTGCAGAGATTAGAGGCAATGGATGATCGACTGCAAATTAAGCAAGAACCACAAGATGGAGATGTGGTCGAAGATACTGCGTTATTTACTCAACAAAATTTCGAAGATCGGTTAGTTACTTACTGTCAAACAATGACCTCTAGACCCTGGAGACACGGAGAAGAATTGAGTGTATCCTGGTTCGCCAGCCATAGGGGAATGACTCTGCTGCATCTGGCCGCTTCTTTGGGTTATTCTAGACTAGTTTGCGCGATGCTACATTGGCGCGCTGAAAATTCTTCACTTCTCTTAGAAACCGAAGTGGATGCCTTGAGTCAAGACGAAGATGGTTATACACCGTTGaTGTGGACTTGCGCTCGAGGTCATACAGAAACGGCAGTTATGCTCTACAAATGGAATCACACagcattaaatattagaaataatttaaatcaaagcGCATTGGAATGTGCAAAAAGCAACAACCATCTAGATTTGGTCAAGGAATTGGAAAAATTGGAGCAACGACGTGACAAAGCAAATATGTTGCtccaatcaaataatttatcgGTAGACAACATTTCCTCACCTACTGTTATCTCACCAGCAAGTTCCGTTACCTCTTTGACGTCTATAGCTTCTAATAGTAAATCTCATGATGGTGTATTCTTAAGACCGGGAGCTGTTACCAGAAGCGAATCCcagaaatataaattgttaaacCTGGATTTGGAAACACTAACAACAGATAGCATCATCAACGGAAACGGCAAACTGTTAAGCCCATCACCAACTTCCTTGGTATCCGATGAAAATCAGAAAAATAACAACAACGGTCGTTTGACCAAAAGACCTTCTGTGGACAGTGGAATATACATGGCTTATGGTCAAACGATAGAAACGGGTTCCTCCAGCCAGAAAAACAAGAAGGCTAATAAAGACACTTCGAAATTGTCGAgGTTCGATAGGAGCATGTCACTGCCAATAAATTCGCCAAACACTTGCAGCACCGATACATCTTTGGACATCGAACAAGACATGACACCAAGTAGGAGAATGGACATGGCACTGTGCGAAGTGGGTAGTGCCCCCCGAAGCAGTAGCCCCCTGATTGATGTGGAAGCTGTTTCAGATGACGATTCAGATACCCACAACAGTCTTGTAGggGAACAAGACGCTAGAGTTTTAACATTGGCAGAACAAATAATAGCAGCAATGCCCGACAGAATTAAGAACGAAAGTGAAGAAATGCTATTGGATAATAGCCCAGGTCCACCCGAAACAAATGACAGCCTATCTGATGTTTTCATGGAACCTTTGTTAGACCAATCGGCTGCGTCCAGTTTCGAATCCACGGAgttcaattttgaattttctgatCATAATTATAgACACTACGATGTTGGAACGCCTGCATCCAGCTTGAGTCCAGCCTCATCAAGCTGCCTCCAATCACCGTGCTCCTTCACATTAGATTCTCCATCGCCTCCACCGACCACGGCCGACTTCTGTGAGTTCTTCCAAGCATCGGGAACGGTTTTCGAAAAAGATTTTTCGAACTTAACCTTATCCGATCGGGAACAAAGAGAACTTTACGAAGCGGCGAAGATCATCCAGAAAGCGTACAGATCGTACAAAGGCCGATTACAACAGGAACAAGATAAAGAAAGAGCTGCCGcagtaataatacaaaattattacagaagatacaaACAATACGCATATTTTAAGCAAATGACTCATGCCGCTATGGTGATACAGAACGGTTATAGATCGTATTGTGAACATAAACGGTTCAAGAAGAGTCAAGAAGCGGCCGTATGCATTCAGAACTATTACCGTAACTACAAGGAACAGGGGGGCAGAGGTAGCAGGGAAGGTACACCTGCCGCTGGTCTCAAGTAA
Protein Sequence
MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFYSEDEPDLNNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKTCSHPMRRINAKMEISNSPLPSSSSNSRLNVSSENNNQVSSTTGSSNSMVLTNNHSPRVYSRENRNQHSHVSRDSNAANTPPLVFSLSQIQGGGGLLILNSNSSTSSNSNTRQSLVAPVSVANFVCNTNTRSMSKNSDNQKNPPLVLKQEAMDTNPTSCCRQTNQIVNGKVLNQRDNKMDVSNDNLRQSVFDYRRSESIITHQTEMVMSSPSTPSKHMDTTTQEDVNEDFKQNYCNDTVVLLGTDSRGSLISKSDSSSIINGGFFNETLDLSQEDIQRTLSANMPLCSSDLETHQANGADVNATQAATISKHVSHHQNNTLENDLNPMDFISNCDVVVSPTHVVDDDVFVNLDCFDMLGEFPDLEVLESGHTGLLDVNPSDGSRNDKSHSDQINSGNLQMEGSAKITDYSPEWAYPEGGVKVLVTGPWHTNGPYTVLFDACAVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREDQLTTQEPTVERSNDNLLKFTLLQRLEAMDDRLQIKQEPQDGDVVEDTALFTQQNFEDRLVTYCQTMTSRPWRHGEELSVSWFASHRGMTLLHLAASLGYSRLVCAMLHWRAENSSLLLETEVDALSQDEDGYTPLMWTCARGHTETAVMLYKWNHTALNIRNNLNQSALECAKSNNHLDLVKELEKLEQRRDKANMLLQSNNLSVDNISSPTVISPASSVTSLTSIASNSKSHDGVFLRPGAVTRSESQKYKLLNLDLETLTTDSIINGNGKLLSPSPTSLVSDENQKNNNNGRLTKRPSVDSGIYMAYGQTIETGSSSQKNKKANKDTSKLSRFDRSMSLPINSPNTCSTDTSLDIEQDMTPSRRMDMALCEVGSAPRSSSPLIDVEAVSDDDSDTHNSLVGEQDARVLTLAEQIIAAMPDRIKNESEEMLLDNSPGPPETNDSLSDVFMEPLLDQSAASSFESTEFNFEFSDHNYRHYDVGTPASSLSPASSSCLQSPCSFTLDSPSPPPTTADFCEFFQASGTVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRLQQEQDKERAAAVIIQNYYRRYKQYAYFKQMTHAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGRGSREGTPAAGLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2