Basic Information

Gene Symbol
ncor1
Assembly
GCA_031893035.1
Location
JAVIWB010002705.1:304905-306907[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-08 4.8e-05 24.5 0.0 4 43 315 354 313 357 0.97

Sequence Information

Coding Sequence
ATGGAGTCGTCTATGTCGGCGATGGGACAGCAACCTTTCAAGAAGATCCGGTTGCAAGACCACAAGGAATTCCAGCCATTGCGCATAGATACTAGGGAACCAGGTGCCTACAACCCCCAAGTTGAAGCTATCTCTCCGACATTTCCTGATCACATCCAGCAGGAAGACCAGGCGTTTCGAACTACTAAGGATGAACTTCTTCAACAGATCGGGAAAGTCGACCGGGAAATCGCTAAAACGGAATCGCAAATtagtattttgcgaaagaaaaTGCAAGAGTTAGAGGAATCCGCTTCTAAACCTAGCACTAAGGCTGAAGTTGAAGAGGATTGCCAACCTAAACACCAAAGTTTAGCGCAGAAAATATACGCGGAAAACAGGAAAAAAGCGCAAAGTGCCCACGCAACCTTGGATTCCTTAGGTCCTAAAGTGGAATGGCCCATTTATAACCAGCCTTCTGATGCTCCGGGTTACCACGAAAATAAGAGAAAACACCTGGCGTATAAAAGAAGGTTGCtggaatattttaagaaaagacaCGTCGAAAAGGATAACAGAAATTCCCATCTTATCGAAACCTATAGCAAAATGATGCAAGAGTGGCATAGGAAGGTCGATAAAACCGAATCTAGTTCAAAGAGAAAGACGAAAGAGGCTAAAAACAGGGAATTCTTCGAGAGAGTTTTCCCTGAATTAAGAAAGCAAAGGGAGGATAAAGAAaggtTTAATAGGGTTGGGGCCCGTATCAAATCCGAAGCTGATATGGAAGAAATTATGGATAACCTCCAGGAGCAGGTTCTTGAAGATAAGAAAATGCGAAGTTATGCCGTTATACCCCCAGTAATGTTGGACGCCAAAGAAAGGAAGCATGTCTATCAAAATAACAACGGCCACATATTGGACATGGAAGCAGTCCATAAAAGTAGACAGTACCTTAACATCTGGACGGCGGCTGAAAAGGAGATCTTTAAGGAGAAATACCTGCAGCATCCAAAAAATTTCTATCTGATAGCTTCGTGTTTAGACAAAAAATCAGTGGCGGATTGTGTccaatattattacgtaagcaAGAAAACCGAGAATTACAAGCAGCTATTGAAGAGATCGCGGCAGAGGACGAGGCATAGGCCGCCGAAGAGCAATGCCGTCGTTGATAATCTACCACCGGGTGTCGTTACGAGGCATCAGAAAGAGCAACAGCAACAACAGCAACAGAAAATCCAACAGAATTATGACTCTGTCGACAATAATGTTAACACTTCTTCCAGTTCTGTAACGTTAGGAAGTTTAACGACTTCGACCACTGTCGTTTCTTCGAGTAACGCGAACAACAGCTCAACAGCGTTAACGCCCACCAGCAGTAGTATAACCTCGTCTTCGTCGTCGCCGGCTCCTGCTTCCACACCCAGCACGGTAATATCGAACAACGGTAACGGTAGTGCTACCAACGTTACGCCGGCGAATACTACTGCGGTCGTGGTAAAAACTGAGATTATAGAGAGTGGCGGTGAGGAAATCAAGTGTGAAACAAACATTAACGATAAGAAACTGTTAAACGATTCCGTGGTTAAAGTCGAGAACACGTCCAGTAATGAAGGTAGTAATAGTGATGTTGCCGTGGTCGTCAAGAAAGAGGATGTCAAGAAAGAAGACGTTCTGATGGTTAAAAAAGAGGATATTATCATCAAAAAAGAAGATGGTGTTATCGATAGCTATGGAAGGTATAAtgctaattattaa
Protein Sequence
MESSMSAMGQQPFKKIRLQDHKEFQPLRIDTREPGAYNPQVEAISPTFPDHIQQEDQAFRTTKDELLQQIGKVDREIAKTESQISILRKKMQELEESASKPSTKAEVEEDCQPKHQSLAQKIYAENRKKAQSAHATLDSLGPKVEWPIYNQPSDAPGYHENKRKHLAYKRRLLEYFKKRHVEKDNRNSHLIETYSKMMQEWHRKVDKTESSSKRKTKEAKNREFFERVFPELRKQREDKERFNRVGARIKSEADMEEIMDNLQEQVLEDKKMRSYAVIPPVMLDAKERKHVYQNNNGHILDMEAVHKSRQYLNIWTAAEKEIFKEKYLQHPKNFYLIASCLDKKSVADCVQYYYVSKKTENYKQLLKRSRQRTRHRPPKSNAVVDNLPPGVVTRHQKEQQQQQQQKIQQNYDSVDNNVNTSSSSVTLGSLTTSTTVVSSSNANNSSTALTPTSSSITSSSSSPAPASTPSTVISNNGNGSATNVTPANTTAVVVKTEIIESGGEEIKCETNINDKKLLNDSVVKVENTSSNEGSNSDVAVVVKKEDVKKEDVLMVKKEDIIIKKEDGVIDSYGRYNANY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00067983;
90% Identity
-
80% Identity
-