Dalb011977.1
Basic Information
- Insect
- Dermolepida albohirtum
- Gene Symbol
- -
- Assembly
- GCA_031893035.1
- Location
- JAVIWB010002220.1:259113-260225[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-11 2.1e-08 34.8 0.0 1 35 11 45 11 48 0.95 2 2 4.3 3.7e+03 -1.2 0.0 2 17 162 177 158 180 0.67
Sequence Information
- Coding Sequence
- atgCCAAATAAAGGAGCTATTAGAAAATGGGATCCAGAAAACATGAAGAAAGCAGTCGAACGAgtaagaaataatgaaatggGCATTAAATTAGCTGCAAAAACTTTCAATGTCCCTCGTACCACACTTCATAGAATGGAAATGGCCAATGTTACCGATCTATTGTCAACATCATTAGGACGGAAGCCAGTTTTTTCCACAGAACTGGAAAGCCAATTAGTGAAATATGCCATTGAAATGGAAACGCGTTATTGGGGTCTTATTCGCAGTGATATTGGatGGGCATTACAGTCATACAAGAAACATAGATTTGTTAGAGCTAGCACGTCAGAATGGGGTGGTAATAATTTCTCTCCCCCACACTCCAGTCACAAAATGCAGCTATTGGACAAAACATTTATGGGTCCTTTGAAAATTTACTACAGTCAAGAAATCAGGAGATTTACTCGAGAAAATGCGAGAAAAGTGACTCAGTATGATATACCTGAACTATTTGCTAGAGCTTACCTTAAAGTTCAAACGGGTGAAATTgctataaattga
- Protein Sequence
- MPNKGAIRKWDPENMKKAVERVRNNEMGIKLAAKTFNVPRTTLHRMEMANVTDLLSTSLGRKPVFSTELESQLVKYAIEMETRYWGLIRSDIGWALQSYKKHRFVRASTSEWGGNNFSPPHSSHKMQLLDKTFMGPLKIYYSQEIRRFTRENARKVTQYDIPELFARAYLKVQTGEIAIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433973;
- 90% Identity
- -
- 80% Identity
- -