Dalb032089.1
Basic Information
- Insect
- Dermolepida albohirtum
- Gene Symbol
- -
- Assembly
- GCA_031893035.1
- Location
- JAVIWB010006067.1:984336-1001065[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-14 2.6e-11 44.1 0.0 1 37 37 73 37 80 0.91 2 4 7.9e-10 6.8e-07 30.0 0.0 4 44 105 145 102 146 0.92 3 4 6.9e-08 6e-05 23.8 0.0 2 34 156 188 155 198 0.87 4 4 1.7e-08 1.5e-05 25.7 0.0 2 39 228 265 227 270 0.91
Sequence Information
- Coding Sequence
- ATGATCTTGTCGTATGTAACAGAAAGGATAACAAAACATTATGTAATAAGTTCAAATTCCGACCATAACGAAATGAAACCTACCAATGTTGGAAGCCGAAAATCATGGACTGAAAAGGATATGCAAAAAGCTATTGAACACGTTCGCGATAAGGTAATGAGTTTTAGAAAAGCCGCTCGTCATTTCAGTGTACCACGTACTACATTGCGAAGACTTTATGCTAAAGACGGCCCTCCCAGCGAAGTGGTTCGTACCAAATTTGttGTATTTGCACCTTGCAGAAGAAGCGTTCGAAGAATCTGGAACGAAAGTGACATGAAACAAGCCATAGCCAgcattaaaaacagaaaaatgggCTATAGAGAAGCTGCACGGTGGTATCATGTGCCGTTTTCTACCTTGTATGGTCGAATAAATCCACATGTTATGTTAAAAACTCCTCAGCGTCAGCGAAAAACTTGGAACGAGAATAACATGGAACAAGCCATAGATCAAGTAAGATCTCACAGGATGAGATACCTTCAGGCAGCAAATTACTACAACGTACCGTTTTCTACTTTATACGTTCTTTGTCAGAAAAACGGACCTGCAGGAGAACTTGCCAGAGCTAAATTAGGACGACCTAGAAAATCaaGTACCGAATTCGGCAAAAAGAATCGTTGCAAGCGAAAAGAATGGAAGCAAGAAAATATGGAGCAAGCCATAGACTgcgtaaaatataaacaaatgggATACAGAGAAGCTGCTCGTTGTTTTAAGGTCCCACGCACGACATTAACGAAATTCTGTCAGGTAGAAGAGAAATCCGAACTTAAGGAAATTGAAGACGGTGTTCCTGATCTGTTACAAATAAAACAGGAAGtagaaattgaataa
- Protein Sequence
- MILSYVTERITKHYVISSNSDHNEMKPTNVGSRKSWTEKDMQKAIEHVRDKVMSFRKAARHFSVPRTTLRRLYAKDGPPSEVVRTKFVVFAPCRRSVRRIWNESDMKQAIASIKNRKMGYREAARWYHVPFSTLYGRINPHVMLKTPQRQRKTWNENNMEQAIDQVRSHRMRYLQAANYYNVPFSTLYVLCQKNGPAGELARAKLGRPRKSSTEFGKKNRCKRKEWKQENMEQAIDCVKYKQMGYREAARCFKVPRTTLTKFCQVEEKSELKEIEDGVPDLLQIKQEVEIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -