Basic Information

Gene Symbol
ct
Assembly
GCA_031893035.1
Location
JAVIWB010005051.1:543897-612911[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.6e-27 4.7e-23 82.1 0.0 2 72 317 388 316 393 0.95
2 3 2.1e-32 2.7e-28 98.9 0.1 2 77 700 776 699 778 0.96
3 3 1.4e-30 1.9e-26 93.0 0.0 3 75 916 989 914 993 0.95

Sequence Information

Coding Sequence
ATGGAAAAGAAAGAATTATCTATAAACCAACTCGTAGAAGAAGTCCAAAGAAATCAAGTTACGATAGCCAAGTTGCATGCTAAAGTACCTGCTTTAGAAGACCAACTGGAACAAAAGAACCAGTACATAGCCAAATTAGAAGCTAAGTTAGAAAGTCAGAAGGATTACGATGACATAAAAAGAGAATTAAGCATATTAAAGTCAGTTAGTAGTGCCAACAATCCAGAAAACAAATCGATAGAACTGTTGCTGGAGAGAACGAAACAAGAAACACCAAAATCACCACAGCAAGACCAAGAAGGAAACGAACACGTCCCATCGCAGCAACAACAACAACAGCAGCCTCCACAACATCTTCACGAAATTTCCAGCCAACAGCAACAACGTACCTCCTCGAACTCACCCCCACAATCCACCGGACCACTACCTCCACCCTTCCAAAACGTGGAAACTTTCGGAACCCTCCTAGGCGAAGAAATAGTCGCCAATTGGAGGAGGAGCATCGAGCAGATGTCCTTGAACAATCGCATTATACCTTCGTCGCCATCTGCCGACGGTCCGATACTCGGCGTAGCCACTCCTATAGCGGCCGATTCCACCGAGAAAAGCACAGCTTCCACACCGCAACCTGCGGATTCCGTTACGGGTCCGCAATCATCGCCTGTCCTCAACGGAAATCCGAAAAGTCCGGAGGATAACAATAATCACCACGTGTCCAACAACAATATCCCCATCAGTGCCACGGTGTGCCCGGCTTTCCTAAAGGCGGACGATATCAAAAGTCCGTACCGGTACGAAGAACAACACCGACCTTTTAGATTCGCCGAAGACTTGGGCATGCCACCGGGATCGATGGTGGGTCGCCTGGGCGAGAGCCTCATTCCAAAAGGTGATCCCATGGAGGCTAGATTACAAGAAATGTTGCGATTCAACATGGATAAATACGCCTCCCAAAACCTGGACACACTTCACATATCTAGAAGAGTCAGAGAATTGCTGTCCATACATAATATTGGACAGAGATTGTTTGCGAAATATATTCTGGGTCTGTCCCAGGGTACAGTTTCAGAATTGTTGTCCAAACCGAAACCGTGGGacaaattaactgaaaaagGAAGAGATAGCTATAGGAAGATGCACGCGTGGAGCTGTGATGACAACGCTGTACTTTTACTGAAGTCATTAATACCAAAGAAAGACAATTTTTCCTCAGGCAAAGATACCGGGATACCGACATTCGGCAGACCGGAAAACGAATACCCCGACGATAGGATAGCGCACATCCTAAGCGAAGCCTCGCACATGCAGATGAAGACACCGGTGGAAGACAGCCATAGTAACGACGATTCGAAATCACCTCAAGGCTGTCCGAGTCCTTTCTCGAAGGATTCCTCGCAGAATAGGAAACTGAAGAAATACGAAAACGACGATATACCTCAAGAGAAGGTCGTCAGAATCTATCAGGAAGAATTCGCGAAACTCATGGGACGAAGGATAGAAGACATCAGGAGTTCTAGAGACGTAGTACATAGTATGTTTCTACCACAAATATTTACTGGAACGCCGATGGACAGGACTCAAGATGATATCAGGGCCGCCATCGACGCTTACCACAGAGAATTAGCAAAAATCAACCAATGCCAAACGCCGAATCAATTACCGAACTTGGGTCTGCTCGCCTTACAACAACAAGCGTTGGCGAATCAAAACCCAGCTATGAACGGCGGAGCTCAAGACTTATCTCTACCcaaagaaaaacttaaaatggTAAACGGCACCGAAGATAAGGATAAAGACGAGGAATCCTCGAAACACTCCGGAAGTGCTTTCAGTCTGGTGCGACCTAAAATCGAACCGGGAACGACCCCTCAAACGACCAGTTCAACGGCGTCGAGTCCCTTAGGAAATACAATCCTACCTCCGGCCATGACACCAACAGATGACTTTTCCGGTTCGGCAGCCGCGAGTCCGCTGCAAAGAATGGCTTCCATAACTAACTCATTGATATCGCAACCACCGACGCAACCCCATCCCACATCATCGCAAAGACCTTTAAAAGCTGTGCTACCACCGATAACGCAGCAGCAATTCGATATGTATAATAACTTAAACACTGAAGAAATTGTTAAGAAAGTTAAAGAACAATTGAGTCAATATTCCATAAGCCAAAGACTGTTCGGCGAGTCAGTTTTAGGGCTGTCACAGGGATCCGTCAGTGATTTATTAGCTAGACCTAAACCTTGGCACATGCTAACGCAAAAAGGAAGAGAACCTTTCATaagaatgaaaatgtttttggaAGACGATAACGCTGTCCATAAACTAGTCGCAAGTCAATACAAAATAGCCCCAGAAAAGTTGATGAGAACCGGAGGATACGGCGCCGTTCCTTACTACATTTCAGCTTGCACGTCAGTAGCCAAACCAATGCCTCCCACACCGAAAATGCTGAGCGACGCTGCTGGTCTCTTGAACAAGATGCAGGAATCTCAAAACCTACTGCCTCCGTCACTGCAAATGAGCCATCACAATCAAAACAATCCGCAACCTCCACCGCCGCCTATGCTACTAACGCCTCCAGGCGTACCACCTCACCACACCATCAATCTCCAAGCACAGGAACACATCAAGAAAAGCAATCACAGTCCTCACGGTATTCCCCCGTCGCCGATGAACCAACAAGGAGCGATGCGTACGATGCATCAGCATATATCACCGAGTGTCTACGAAATGGCAGCGTTGACGCAAGATCTAGACACGCAAGTTATAACAACAAAGATCAAGGAGGCCCTATTAGCGAATAACATAGGCCAAAAGatCTTTGGTGAAGCGGTACTGGGCTTGAGTCAAGGATCCGTTTCAGAATTACTGTCCAAACCCAAACCATGGCATATGCTCAGCATTAAAGGTCGAGAGCCGTTCATTAGAATGCAGTTGTGGTTGAACGATGCTCACAATGTCGACAGACTGCAAGCTCTCAAAAACGAAAGAAGAGAAGCCAACAAACGTAGACGCTCTTCGGGCCCCGGCGCGCACGATAACAGTTCGGACACATCATCGAACGATACGTCGGAATTTTACCATTCGAACTCTCCGGGTCCAGGACCGCCGTCATCGAAAAAACAAAGAGTTTTGTTCAGCGAAGAACAAAAGGAAGCGTTGAGATTGGCTTTCGCGATGGATCCGTACCCGAACATGTCGATAATGGAATTTCTAGCAGGGGAATTAGGCTTATCGAGTCGAACCATAACGAACTGGTTTCACAATCATCGGATGAGGTTAAAACAACAGGTCCCTCACGGTATGGCCACAGATATCCCGCCTAGAGACCAGACAAGTAATCAGACACCTTTCGATCCAACCCAtttcaaattgttattaaacCAAAGATTATTAGAACTGAACAAAGAAAGAATAGGACTCAGTAATTTGCCCTTAGGCTACCCCTATATAGCAGCCAATCCGAATTTGGCAGCTTTAATAGGTCGAGGGTTATTGCCGACAGGAGAAATGGATTTATCGGCGTTAAATAACGCCGTTAAGGAACAAATGAGCGGGTTAGATCTCTCCATGACGTCCTTGAAAAGGGAACCCGGTGACTTTGACGACGAAGACGACGTTGAAAGCAACGTTGGTTCGGAAGATTCAAACATGTCGGGGAGTTTACACAGAGGTGAAGTGAAAATAGAACAGAAAGAGACTCCAGTGTCGTCGCAAGGTCGATCCTCGAGAAGGAAACCTGCGGCACCCCAATGGGTAAATCCCGAGTGGCAAGACGAAAAGGAAAAATCGCAACTTCAGCAGCAAAGTGGTGATGAAGTGATTATAAACGGTGTTTGTGTTATGCAGACTGAAGATTACGGTAGGAGGAATTCTGAAGAGACAGTCCGAGTGGAACCTACTCCGGTTATGGACAGGTTCGAGGACGATCAAAGTGACGCTTCCTCTGTTAGTCAGGGTGACGAACATAATCAAGAACAGAGACATCACCACCTGCACCATCAAGAAGATAAAGAAGAGTTGGAAAGAAACAACGAAGAAACGGAAACGGAGAAACAAGTGAAACAAGAAGTGGTGGAAGAGGAAAGATGGGACTATTAG
Protein Sequence
MEKKELSINQLVEEVQRNQVTIAKLHAKVPALEDQLEQKNQYIAKLEAKLESQKDYDDIKRELSILKSVSSANNPENKSIELLLERTKQETPKSPQQDQEGNEHVPSQQQQQQQPPQHLHEISSQQQQRTSSNSPPQSTGPLPPPFQNVETFGTLLGEEIVANWRRSIEQMSLNNRIIPSSPSADGPILGVATPIAADSTEKSTASTPQPADSVTGPQSSPVLNGNPKSPEDNNNHHVSNNNIPISATVCPAFLKADDIKSPYRYEEQHRPFRFAEDLGMPPGSMVGRLGESLIPKGDPMEARLQEMLRFNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDDNAVLLLKSLIPKKDNFSSGKDTGIPTFGRPENEYPDDRIAHILSEASHMQMKTPVEDSHSNDDSKSPQGCPSPFSKDSSQNRKLKKYENDDIPQEKVVRIYQEEFAKLMGRRIEDIRSSRDVVHSMFLPQIFTGTPMDRTQDDIRAAIDAYHRELAKINQCQTPNQLPNLGLLALQQQALANQNPAMNGGAQDLSLPKEKLKMVNGTEDKDKDEESSKHSGSAFSLVRPKIEPGTTPQTTSSTASSPLGNTILPPAMTPTDDFSGSAAASPLQRMASITNSLISQPPTQPHPTSSQRPLKAVLPPITQQQFDMYNNLNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGAVPYYISACTSVAKPMPPTPKMLSDAAGLLNKMQESQNLLPPSLQMSHHNQNNPQPPPPPMLLTPPGVPPHHTINLQAQEHIKKSNHSPHGIPPSPMNQQGAMRTMHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALRLAFAMDPYPNMSIMEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMATDIPPRDQTSNQTPFDPTHFKLLLNQRLLELNKERIGLSNLPLGYPYIAANPNLAALIGRGLLPTGEMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVESNVGSEDSNMSGSLHRGEVKIEQKETPVSSQGRSSRRKPAAPQWVNPEWQDEKEKSQLQQQSGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFEDDQSDASSVSQGDEHNQEQRHHHLHHQEDKEELERNNEETETEKQVKQEVVEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01498765;
90% Identity
iTF_01498765;
80% Identity
iTF_00433924;