Basic Information

Gene Symbol
ARID5B
Assembly
GCA_031893035.1
Location
JAVIWB010003702.1:269012-291637[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-25 6e-22 78.9 0.0 2 89 125 210 124 210 0.95
2 2 1.4 7.8e+03 -1.6 0.1 10 37 315 344 308 346 0.75

Sequence Information

Coding Sequence
ATGAAAAGGCTAGAAGGTGTAGAGGATCAATATTTAAGGCATAAACTTGTTAATGCCTTAGGAGGTTTCGGAGTTCCAAACTGCAATACTAGAATATTATTCTGTAGAGATACGTTCGATTATCCAGAACTCGAAGGACACGAACTCCTATGCAATCATCTCGCTCCCAAGCTTAAAGGAAGGCCTCGAGGGAAACGGAAAAAGCGCAGCTTATCTCCGGGATCAGAGAGCAATGAGTCAGAATGTTCTATATCTAATATAGCTAGTACGTCAACGAGTAAAGTTACAAATGAAAATTGCGTCAACGGATTTAGAAAAGATATCAGTACAATATCTACTAGAAGAAGCACACGTTTTTCAGATAGCAGTGAAAgtaaaatgtttcttaaaaaactCACGTCATTTATGAAAACTAACCATACTCCAATCGGAAGAATTCCTTCGTTGGGATACAGAGAActcgATCTGTATACATTTTACACAAAAGTTCAAAAATGTGGTGGCTACGATGTGGTAACTGCGAATCGTCTTTGGAAATCTATCTTTGACGATTTAGGAGGAAATCATGGAAGTACAAGCGCAGCTACCGTCATTAGAAGGCACTATGAAAGATTTCTGCTGGCATACGAACGCCATGTTAAGGGTGAAGAATATAAACCTTTACCAATTTCTGAAAGGCGAAGattaaaaagcaaaacaaaCAGAAATAGCGTGAGCGATGCCGAGACCAGTGAAGGAACATCGAGTAGTGATAATAGCACCCCAATGCCTCAAACAATGATCCCTACAACCTCTCAATCTGTATTCGCCACTGGAAGTGGGACGACTAAATGTAAGgaCAATcctgataaaataaaaacgtctTCATTACGGAGTGTGAGAGTAAAACCTGAACGATTAAGGGAAgcaggaaaattaaaaaccgaATCTATACAGAAACAACAAGAAACAACGAAGGAAAACAATGTGCCATTAAAAACGGAACCAGTAgaggaaataaatgaaaaacctaaaaatttgtttcttcttGAAAAGAAAGATAATGAACCCACAACAACCGCCCTTACTCCAATTCAAAAAGTATCAACAGAAGAAATACTTAGTCCTTTAGAAAGCAAAGAGATACccataatagaaataaaagaagaaatacaaaaagaagTGGAAATTATAGAAATACCTCCTAAAGATAAAGATGAAATGTCGTTTAAAGATGTGATACAGTTAGATTCAACAGACGTGTATAAGACAATAAATTCaactaataagaaaaacattGCCGGCGATACTGTTATAACGgaagttaaaaaacaaaaattggatATATTAAAACAAGGTGGCTTGGAGGTGACTCCTGTTCGAAATATCTCAATTAGTGTTAAGAAAGAATCACGGCCTTCCGTAATACAAACGGCAGTAACACATCGTGTAGACATATTTCCTAACGATGTTAAAATAGatgataaaaaacaaatgccACCGCCACAACTGGCGACACTAACAAAACGGCCCGTACAAATACATCCTGTAATACCTTCAGTACCGACCCCAATTACATCGAAGACTCCAATTCGCacgaataataaaacattttcttataataatcaGTCCCCTCCTAAAGTTCTGCAGTCTAAATCAATATACACTCCATCAGAGGAGACAATATATGGTGATCCGAAAGATATTTTTCAACCTACGATTCAGAATATCCAATCACCGAAGTTTATGGATAATATGCGACATCCGCCGACGGGCGGTGGTATATTAGATTTAACTGTGAGGAGTCCTCAAAAGCCAGGTGTTCAAATTGCACAAATGCCACCATACAATGTCCGACATACAAATTTAGTAATACCATCACCTTTATCATTTTTGGAGAATAAAAAGGTTGGATCGAATTTAGAAATTACTCTTGTTGGAACCAATAACGTAAAAAACCACAACAATAATATGAACCACCACAGAGTTAACAACATTAGTAAGTACATGCCGAAACAACGCGTAACCTACAACAACTCGTCATTGGATTTTCAAGAATATAAGATTCCTCAAAAGCGATCTTCCACAGAAAACTACGTGAGTACGAAACTACCAAAAGTAGAAGACAAGATACGCAATACAATATATTCCACGCAAATGTATCCACCTCGCGAAGTGAAAAAGAACGATTTCGAAACATCAATTAATAAACACTATAGATTAGAAAATCAAGTCACGAAAACCCAAGTCCCTAATTCCGCTGCCAAGCAGCCGTTTATAGCGCCTCCTACGATGTTTAACATGCCCAGTTACATAAATTCGGTTGCGAAAAATGTACATCCTTTCATGCATGTAGATCCATCATTATACTATTTACAGAGTATGTATCCACCGTTAAACATCCCACCTATGTCACTGATGCCCAGTCCGGATTCGTTACAATTTTACACGGAAATATTAGCCCAAAATTCAAGGTCTCGTGTGCAATTTCCATTCGCTCAAGACAGTTCATCTATGGCATCTACtgataatattaagaaataa
Protein Sequence
MKRLEGVEDQYLRHKLVNALGGFGVPNCNTRILFCRDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSLSPGSESNESECSISNIASTSTSKVTNENCVNGFRKDISTISTRRSTRFSDSSESKMFLKKLTSFMKTNHTPIGRIPSLGYRELDLYTFYTKVQKCGGYDVVTANRLWKSIFDDLGGNHGSTSAATVIRRHYERFLLAYERHVKGEEYKPLPISERRRLKSKTNRNSVSDAETSEGTSSSDNSTPMPQTMIPTTSQSVFATGSGTTKCKDNPDKIKTSSLRSVRVKPERLREAGKLKTESIQKQQETTKENNVPLKTEPVEEINEKPKNLFLLEKKDNEPTTTALTPIQKVSTEEILSPLESKEIPIIEIKEEIQKEVEIIEIPPKDKDEMSFKDVIQLDSTDVYKTINSTNKKNIAGDTVITEVKKQKLDILKQGGLEVTPVRNISISVKKESRPSVIQTAVTHRVDIFPNDVKIDDKKQMPPPQLATLTKRPVQIHPVIPSVPTPITSKTPIRTNNKTFSYNNQSPPKVLQSKSIYTPSEETIYGDPKDIFQPTIQNIQSPKFMDNMRHPPTGGGILDLTVRSPQKPGVQIAQMPPYNVRHTNLVIPSPLSFLENKKVGSNLEITLVGTNNVKNHNNNMNHHRVNNISKYMPKQRVTYNNSSLDFQEYKIPQKRSSTENYVSTKLPKVEDKIRNTIYSTQMYPPREVKKNDFETSINKHYRLENQVTKTQVPNSAAKQPFIAPPTMFNMPSYINSVAKNVHPFMHVDPSLYYLQSMYPPLNIPPMSLMPSPDSLQFYTEILAQNSRSRVQFPFAQDSSSMASTDNIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-