Basic Information

Gene Symbol
Kdm5
Assembly
GCA_031893035.1
Location
JAVIWB010006544.1:58534-74770[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-27 3.4e-23 82.9 0.1 2 89 105 188 104 188 0.95
2 2 2.3 1.2e+04 -2.2 0.0 33 81 1229 1279 1226 1282 0.59

Sequence Information

Coding Sequence
ATGGCTTCTAAGGAAGATAAACGATCAAGCAATGGAAGTATAAGCAATGGTGATTATGCACCAACCAGTCTCAAGCATGAACCCTTTGAATTTATTGTACCACCTGAGGCACCCGTATTTACTCCTACAGCTGAAGAATTTGGTGATCCACTAGGTTACATTGACAAAATTAGGAATATTGCTGAACAATGTggaatttgcaaaattaaacCACCACctaactgGCAGCCACCATTTGCTGTTGATGTAGATAAACTGAAATTCACACCAAGAATACAAAGATTAAATGAATTAGagGCGAAAACGAGAATAAAACTCAACTTCTTAGACCAAATAGCAAAATTCTGGGAGCTCCAGGGTTCCTCCTTGAAGATTCCTATGGTAGAGAAAAGGGCCTTAGATCTTTATACACTGCATAGATTAGTTCATAACGAAGGTGGATTCAATAACGTGACGAAAGATAGAAAGTGGTCGAAAATAGCAACATGTATGGGTTATCCGCAAGGTAAAAGCATAGGAACAATGTTAAAAACTCACTATGAGCGACTGTTGTATCCATACGAAGTATTTTCCGAAGGGAAGTCATTAAAATCTTTGAAGAAGGATTTATCGGACGAAATTAAGACGGAAAATGACGATGAAGAATACAAACCTCATCGCATCGAAAGTAGGATGTTAGCTAATAAGAAGGGCGGTTGTAAGCGTAGGAAACTAGCGAATGAGCCACAGTTTCACATTAACAATGAGACCAAAGTGAAGGAGGAACCGGAAGAACCTGCGGATAGTGAATATAATAAGGAACTCAAACGACTACAATTTTACGGTGCTGGACCTAAAATGGCCGGTTACAATGTTGATAAGAAGGAAGATAAGACACGGGGGAAAATTGTTAATTACGATTTAGACTATGATCCTCTGGCCAAATACGTCTGCCATAATTGTAATCGTGGAGATTCCGAAGAATATATGTTATTATGCGATGGTTGTGACGATAGTTACCACACGTTCTGCCTTATGCCGCCACTAATCGAAATACCAAAAGGTGACTGGTGTTGTCCGAAATGCGTGGCCGAAGAAGTCTCAAAACCAACGGAAGCTTTCGGTTTCGAGCAGGCTCAACGCGAATATAACTTGCAACAATTTGGCGAAATGGCGGATCAATTTAAATCCGAATACTTCAACATGCCTGTGCACCTTGTACCAACTAGCGTTGTTGAAAAAGAATTTTGGAGAATAGTTTCGTCAATAGATGAAGATGTAACCGTAGAATATGGCGCCGATTTACATACTATGGATCACGGATCTGGTTTTCCAACGAAGAATTCTTTAAACCTTTTGCCCGGTGATCAAGAATACGCTTATTCTGGATGGAATTTAAACAATCTACCTGTTTTAGAAGGCTCTGTTTTAGGTTATATTAATGCTGACATATCGGGAATGAAAGTACCTTGGATGTATGTTGGAATGTGTTTTGCTACCTTTTGTTGGCATAATGAGGATCACTGgagttattcaataaattatttgcattgGGGTGAACCAAAGACATGGTATGGAGTTCCTGGTTCTAAAGCCGAAATGTTTGAAGAAACAATGAAGTCTGCCGCACCTGAACTTTTCCAATCGCAGCCAGATCTTTTGCATCAACTGGTCACTATCATGAACCCAAACATACTGATGAATGCTGGAGTTCCTGTATATAGAACTGATCAACATGCTGGCGAATTTGTCGTGACATTCCCAAGAGCTTACCATGCAGGTTTTAATCAAGGTTACAATTTTGCTGAAGCTGTTAATTTTGCTCCTGCGGATTGGGTTTCCATGGGTCGTGAGTGCGTGCAACATTATTCTCAATTAAGAAGATTCTGTGTATTCTCTCACGATGAACTCGTTTGCAAAATGGCCGCAAATCCCGAGAAACTTGATATAACAGTAGCTGCAGCAACATACCAAGATATGCTGAGAATGGTAGAAACTGAGAAGAAATTGAGGAAGGGCCTCCTGGACTGGGGTGTAACGAATGCGGAAAGAGAAGCATTTGAACTACTTCCAGATGATGAACGTCAATGTGATATTTGTAAAACCACTTGCTTCATGTCAGCAATATCATGTTCTTGCATGAGCAATGTGTTGGTCTGTCTAAGGCATTATACAGATCTTTGTAAATGTCCATCGCAAAAGCGGACACTACGTTATCGGTACACATTAGATGAACTGCTTCCATTATTAAGAAACCTAAAGACTAAAGCCGAATCATTCGACCGGTGGGCGGATAGGGTTAAAGATGCCTTAGACAGAAATACTCCAAAAAGTGTGGATCTAGCAGAATTGAAGTCTTTATTAAATGAAGCACACGGAAAGAGCTTCCCGAAATCTGATCTGATACAGACCCTAGCCAATGCCATCGAAGACGCAGAAAAATGTGCCAGCGTCATAAGACAGttagatttaaacaaaataCGTACCAGAAACTCCCAAGACAACAAAAGTAAATTAACGTTTGAAGAATTAACATTGTTTTGTGAAGAAATAGATAGTTTAGCTTGTGTTTTGGAGGAGGAGAAAATTATAAAGGAACTTAAAGTGAAGTCTCATGAATTTGAAGAGAAAAGTCAACATCTTTTAGAGCTTCCACTAAAAAACTGCCCTATACTGGAGGTTGAGGAATGTGTCAAATCCAGTAATGATCTGTGCATAGAGCTTCCATCCTTACCGGGTTTGTTTGTGAGACTTAAACAATTGAAATGGTTGCGAGAAACGCAAACGACGAGATCTTCTTCTTCTGATGTTGCAGACATTGAAACTTTAAAAGGTCTTCTTAAAGTAGGTTTGGAGTTACCTGCTGACTCGGCAATAAATAGCGTTATTTCagaaatacaaacattaattcAAGATGCAGAAAAATGGGAAGAAAAAGCTCAGGACTTGTTGAAAAAGAATGGCTCTAGTATAATCAGTCAGGCCGAGCAGTTGATCAAAGACGCGGCTGAAATCGACGTTTATTTACCGACGGAGAATCTACTTATCGATAGTTTGAATAACGCCAACGAATGGTTCAAGCAATTACAAGATATCAATTCGTTAGAATTCTATCCTTATTTAAGTTCAATAGAAGaactaataaagaaaagtaagaaCTTCTCTTTTCAGCTGGACGAAGTTGATAAGTTAAAGTCTTATGTTACTGCTGCGAATTCTTGGAAAGAAAAAACCGGAAGGATATTTTTGCGTAAAAACTCCTCATGTACTTTGATGGAAGCCTTATCACCTAGAACACAATTCCTGATAACTAAGGGAAGACGAAAAGTTCAAGACGAAGACAGTATAAAATTGCTAGATAATATGGATCCAGCTGCAGTTGTAGCTACATTTAAAGATGCCGAAGATCGGGAGATaaagaatataagaaatttaagaGTAATAAATAACAGTAAATCCATCGAAGattctatattttgtatatgcCAGAAGGCCGCATCCGGGATAATGATGCAGTGTGATTTGTGTAAAGACTGGTTTCACGCAACATGCGTTCAATTGCCCAAAATAGCAAGTATGAAGCCAAAATTTAGTTATTCTAGTGCAGCTATACGTATGGGCACCAAAGATTGTAGATATCTCTGTCCGCTGTGCGTCCGAACAcgtcgaccaaagctcgaatCTATATTGAGTTTGCTTATgtctttacaaaaattacatacGCGGTTACCTGAAGGAGAGGCCTTACAATGTTTAACGGAAAGAGCAATGAACTGGCAAGACCGTGCCAGACAACTCTTGCAAACCAGCGAATTAGAATCAGCCATGAGTAAGATAAATACGCTGGCACAGAAGTATTCTGAAGCCGCTGCGCGTTTGAAAACTGAGAAAATTATCAGTATGGAACTGAAAAAGGCTGCGAATAATCCAGAATTACAACAGCGCGTACAAGAGATCACACCATTCAGCGGTTTGAACAGTGAAGAACAAGATGAATGTATGAGTGTACACGATAGCGGATCTTCGGACGACGAAACGCCAAAAGACGAGACGAGTGATGAAAACTGTAGAGATGAGCACGCCTATTCGATGCATGTTTCCAGAATGGACGAATCGGAATGGCCCGTACAAGTAAACCCATATACAAGGCAACAACTGGAGGATCTTATTATGGAGGGCGATTTATTAGAAGTAACCTTGGACGAGAATCAGCAATTATGGCAAATTTTTCAGGCATCCAAAGATCCCGGAAgagatgtttttattttagattatgaCACGCCAGGCAAGGGAACCCcattgaaaaaaaatcgaaagcgtCGTTCTGACGATGGCAGTGAAATCCTAAAGTCAAATTGTAAGCAAAAAATCGATCTCAGCAAAAAGTTTAAGTCAAGGAAACCGAATACTAAAGAGGGTAATCCCAGGAGACAGGACACAGTTAAGTCGCGCAAAAGTAGGGGTCGCAATAGTCAAAATTCCGACGAAGAGGAGTTAGAGGAACGATGCGCTTTCGAAACGTGCCTTCAACCTTCCGGGGAAGAGGTCGTCCAATGGGTACAGTGCGACGGCGGTTGTGAGTTGTGGTTCCACATGCTTTGTGTAGGCTTAACGGCCAAAGATATAAACGAAGACGAGGATTACATATGTATGGCCTGTTCGCAGGAGACTGTTAAAAATAGTTTGGAAAGTAAAGAACAATCATCCTCGTTAGTATGCGGCATCAATACGACAAGTGTATCTAAAATGACCACTTTAACTAAAACTAGTTAA
Protein Sequence
MASKEDKRSSNGSISNGDYAPTSLKHEPFEFIVPPEAPVFTPTAEEFGDPLGYIDKIRNIAEQCGICKIKPPPNWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVHNEGGFNNVTKDRKWSKIATCMGYPQGKSIGTMLKTHYERLLYPYEVFSEGKSLKSLKKDLSDEIKTENDDEEYKPHRIESRMLANKKGGCKRRKLANEPQFHINNETKVKEEPEEPADSEYNKELKRLQFYGAGPKMAGYNVDKKEDKTRGKIVNYDLDYDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLIEIPKGDWCCPKCVAEEVSKPTEAFGFEQAQREYNLQQFGEMADQFKSEYFNMPVHLVPTSVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSLNLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEMFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWVSMGRECVQHYSQLRRFCVFSHDELVCKMAANPEKLDITVAAATYQDMLRMVETEKKLRKGLLDWGVTNAEREAFELLPDDERQCDICKTTCFMSAISCSCMSNVLVCLRHYTDLCKCPSQKRTLRYRYTLDELLPLLRNLKTKAESFDRWADRVKDALDRNTPKSVDLAELKSLLNEAHGKSFPKSDLIQTLANAIEDAEKCASVIRQLDLNKIRTRNSQDNKSKLTFEELTLFCEEIDSLACVLEEEKIIKELKVKSHEFEEKSQHLLELPLKNCPILEVEECVKSSNDLCIELPSLPGLFVRLKQLKWLRETQTTRSSSSDVADIETLKGLLKVGLELPADSAINSVISEIQTLIQDAEKWEEKAQDLLKKNGSSIISQAEQLIKDAAEIDVYLPTENLLIDSLNNANEWFKQLQDINSLEFYPYLSSIEELIKKSKNFSFQLDEVDKLKSYVTAANSWKEKTGRIFLRKNSSCTLMEALSPRTQFLITKGRRKVQDEDSIKLLDNMDPAAVVATFKDAEDREIKNIRNLRVINNSKSIEDSIFCICQKAASGIMMQCDLCKDWFHATCVQLPKIASMKPKFSYSSAAIRMGTKDCRYLCPLCVRTRRPKLESILSLLMSLQKLHTRLPEGEALQCLTERAMNWQDRARQLLQTSELESAMSKINTLAQKYSEAAARLKTEKIISMELKKAANNPELQQRVQEITPFSGLNSEEQDECMSVHDSGSSDDETPKDETSDENCRDEHAYSMHVSRMDESEWPVQVNPYTRQQLEDLIMEGDLLEVTLDENQQLWQIFQASKDPGRDVFILDYDTPGKGTPLKKNRKRRSDDGSEILKSNCKQKIDLSKKFKSRKPNTKEGNPRRQDTVKSRKSRGRNSQNSDEEELEERCAFETCLQPSGEEVVQWVQCDGGCELWFHMLCVGLTAKDINEDEDYICMACSQETVKNSLESKEQSSSLVCGINTTSVSKMTTLTKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01252517;
90% Identity
-
80% Identity
-