Basic Information

Gene Symbol
grh
Assembly
GCA_031893035.1
Location
JAVIWB010005267.1:3481-22521[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-64 2.5e-60 204.6 0.3 26 221 452 642 437 644 0.94

Sequence Information

Coding Sequence
ATGGCCGAATTGCCTGAGGGGAATGCCCCTCCCGAAGAACAGACTTGGCGAGCGTACTACGAACATCCTTTAACCGCGGCCACCACAGCCATGCTAAACATTGGTGGTGGCCCCGAAGACCAAACTGCCACCATGGGCCTCATCTACGAATACTACAAGCTGCCACCCTTAACGGCTGATTCTAAGGATAAGTTAGCTGACATATGGCCGACAAGTTCTCAAGCGAGCAGTATCCTTACGTCTCAACTGAAGgcgaccaatggtttggtgagTGGGGCGGGATTAGATTTGACCCCACCTCTACCGAACCAGCTAAGTACGCAAGATATACAAGGTTTATTTATAAACCAGCACGTAGGATACACACAGCCGGGATCATCAGGTActcaaaatttacaaatagtgaAACGGGAACCAGAAGACTTGAGTCACCACCGTAAACTGGAAAATACCTCCCCCAGTATAGATGGCTCGATAATAGTTAGCAAACAGTCGAGGCACAAGGTGGTGTTGATTCCGTCAGGCGCCCAGCCTGGAGACCTGGTGGTGGATGTTAATTCCATCAAGGATGAAAATCATCGTGGACTGAAATCGCCGCAGCACGAATCACGTTCCGTGAACGGAACACCGACGTCTACACACAGCAGTTTACTAACAGATGGTCCAAACTCTGGACCGATTGAGTTCGTTCCATCGGATGGCCTCAAACCAGCGATGTATAGCACACAAATATTCGCGTCAATGAGCAACACTCACAGTGGAAGCGGTACACCCTCGCCGAACCCCTATAGTGATCATGTCACTCAATACACGCAGAGCGGTATTGGAAGTAATTATACGACATCGACGGCCAGGCCCGGTAATCCTGCGACGTTTTCCGTCGCTGATCCCTATTACAGGGAATATTTCACCACTGTGGCCTCCGGTGCTGGTACACCTGAGCCCGCATATTCTAGCCAGTTGCGCCAAACGCAATTAGCCTATGGTGAGGAAGCGGCTGGGGGCGGCACCACCGCCAGCTTTGTCGAAAGATATGTAAGGCAAAACTCTTATCACACCAAAGGCGTTATTGCAGCTGCAACAGCCGCTGGACTCACTGTAGATCTGCCAAGTCCAGACAGTGGTATAGGTGCAGATGCCATTACACCACGCGATCAAAACACCATGCAACAGTCGTTTGATTACACAGAACTGTGCCAAAACAATACTGGACTGTTAGATCCTCTGTCGCTTAGTCAACGCAGTAATCCGAGTTCGCAATCGCCCGGATCGCAAACGAGCAACAGAAGCAGACCCTGGCACGATTTCGGACGGCAAAATGACGCCGACAAAATACAGATACCCAAACTTATATCCAATGTCGGCTTCAAGTATTTTCTGGAGACCCCGATATCGACGTCGCAACGACGGGAAGACGATCGCATAACGTACATAAATAAAGGACAATTTTACGGAATCACGTTGGAGTACATAGATGACCCAAATAAACAGTTGCAATCGCAAACAGTCAAGAGCATTGTTATGTTAATGTTTCGAGAGGAGAAAAGTCCAGAAGACGAGATAAAGGCTTGGCAATTTTGGCACGGCAGGCAACATTCAGTTAAACAACGCATTTTAGACGCAGATACCAAAAATAGTGTCGGTTTAGTTGGATGTATAGAGGAAGTTGCTCACAATGCCATAGCTGTATATTGGAATCCCCTAGAGAGTGCGGCAAAGATTAATATAGCAGTTCAATGTTTAAGCACCGATTTTAGTAGCCAAAAAGGTGTGAAGGGACTTCCCCTACACCTACAAATCGATACGTACGAAGATCCACGCGATTCAAATGTCTACCACCGGGGATATTGCCAAATCAAAGTATTTTGTGATAAGGGCGCCGAAAGAAAGACGAGAGACGAGGAAAGGCGAGCCGCCAAACGTAAAATGACTGCAACTGGACGCAAGAAATTGGACGAGCTTTATCATCCCATGTGCGAAAGGTCCGAATTTTATTCCATGAGTGACCTCCTAAAACCGCCAGTCTTATTTTCACCGGCAGAAGACATCGATAAGCTCACGACAATGGAGCTCCAAGGATTCTACAGTCACGATCCTGACGGTTCGCTGAACGGGCCCGTCGAGCACGTCAAATCTGGATCTCCATTTTTGCTACATACAGCGGCAAAAACACCCACTACGCCCACattaaaatttcacaatcaTTTCCCACCGGACGCCGATAAAAAAGACAACATCTTGGAAAGCAATCTCAGCACTGACGGGAGTGTTTTCTCGCCGCCACTGAAAAGAGCCAAGCTCCTCGGGGCAAATATAGGAATGGGTAGCGCAGGACCACCCCCGCTAAATGAGAGGGTCATGCTGTACGTAAGGCAGGAATCGGAAGAGGTCTACACCCCGTTACATGTTGTGCCGCCGACTACAACAGGATTAATAAATGCGATTAAGAACAAGTACAATATTTCTGCTTCcagcataaataatttgtatcgCAAAAACAAAAAAGGCATTTTAGCCAAGATGGACGATGATATGGTCGCGTACTATTGTAACGAAGACTTGTTCCTCCTAGAATTGAAAACGGTGGACGAAGATTTACTGGACATAACATTCGTAGAATTGTTGGATCACTGA
Protein Sequence
MAELPEGNAPPEEQTWRAYYEHPLTAATTAMLNIGGGPEDQTATMGLIYEYYKLPPLTADSKDKLADIWPTSSQASSILTSQLKATNGLVSGAGLDLTPPLPNQLSTQDIQGLFINQHVGYTQPGSSGTQNLQIVKREPEDLSHHRKLENTSPSIDGSIIVSKQSRHKVVLIPSGAQPGDLVVDVNSIKDENHRGLKSPQHESRSVNGTPTSTHSSLLTDGPNSGPIEFVPSDGLKPAMYSTQIFASMSNTHSGSGTPSPNPYSDHVTQYTQSGIGSNYTTSTARPGNPATFSVADPYYREYFTTVASGAGTPEPAYSSQLRQTQLAYGEEAAGGGTTASFVERYVRQNSYHTKGVIAAATAAGLTVDLPSPDSGIGADAITPRDQNTMQQSFDYTELCQNNTGLLDPLSLSQRSNPSSQSPGSQTSNRSRPWHDFGRQNDADKIQIPKLISNVGFKYFLETPISTSQRREDDRITYINKGQFYGITLEYIDDPNKQLQSQTVKSIVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESAAKINIAVQCLSTDFSSQKGVKGLPLHLQIDTYEDPRDSNVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPMCERSEFYSMSDLLKPPVLFSPAEDIDKLTTMELQGFYSHDPDGSLNGPVEHVKSGSPFLLHTAAKTPTTPTLKFHNHFPPDADKKDNILESNLSTDGSVFSPPLKRAKLLGANIGMGSAGPPPLNERVMLYVRQESEEVYTPLHVVPPTTTGLINAIKNKYNISASSINNLYRKNKKGILAKMDDDMVAYYCNEDLFLLELKTVDEDLLDITFVELLDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00395018;
90% Identity
iTF_01498644;
80% Identity
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