Basic Information

Gene Symbol
cnc
Assembly
GCA_031893035.1
Location
JAVIWB010003632.1:5865-14440[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8 6.1e+03 -1.6 0.3 19 31 207 219 206 225 0.83
2 2 3.3e-16 5.3e-13 49.8 5.7 3 65 265 327 263 327 0.97

Sequence Information

Coding Sequence
ATGCGTATGTTGGATAGCAATAATGCTATCAGTAATCTTAGCATGACAGCCGGTACCAATGCCACAACAATATCGCGCGCAGATGCTGAGCGCATGGACACATCCAGCGACAGTGCAGTTAGCTCCATGGGATCCGAACGTGTGCCATCTTTATCCGACGGAGAATGGTGTGATGCTGGATCAGATTCTGGACACAATACCGGCGATCACTACGTTACTGATTACCACGGAAGTAAATTTAGACCATACGACTATAGCTACACTAGTAGGCAGCATTCAGCCACCATGAGCACATCAGATGCTAATAGATTACCTCCAGTTGCTCAAAAGAAGCATCAGATGTTCGGCAAACGTAGTTTCCAAGAACAAGCTGGTGCTGTGGCTCATCCCCAACCAACaccaataaaatatgaataccgCGACCCGTCAACAGCTTCTTCATTTACAAGTCCCAGTCAGGCCGAAGGTGCTGTGTCAAATAAAATCCCCGAAATGAAGTACTCTTGCTCAGTAGAATTCGGCAGGCAGAACATAGGTAGAACCGCAATCGACCACATACAACACAACCATACGTATCATCTTCCGGTCGAAAGTACAGGTGCCATGCAAAGACCAGTGTCACGTGACAAACTAAAATGTCGAAAATCTGAATCCGAGCACTTAACACGCGATGAAAAACGTGCCCGTGCTTTGAATGTTCCAATATCGGTCGACGATATAATCAACTTACCCATGGATGAGTTCAATGAGAGATTGTCAAAATACGATCTCAGTGAACCACAATTGAGTTTGATTCGTGATATCCGTAGAAGAGGAAAGAATAAGGTCGCCGCCCAGaattgcagaaaaagaaaattggatCAGATTCTGAGCTTGGCAGACGAAGTCAGGTCAATGCGGGACCGTAAAATGAGATTGGTGGAAGAGTTTGAGTACATGTCATCAGAAAACAAACGGGTTCGCGATAAATATCAACAACTTTATAGACATGTTTTCCAGaaTTTACGAGACCCCGACGGCAACCAATACTCCCCGTTCCATTACAGTTTGCAGATAACAGCTGATGGATCAATTTTGGTTGTTCCGAAAGCGAATTCCAGTATATCAAATCCAGAGCAACGCAAAGATCCTTCACCTCCAGCCCATAAAGAATAA
Protein Sequence
MRMLDSNNAISNLSMTAGTNATTISRADAERMDTSSDSAVSSMGSERVPSLSDGEWCDAGSDSGHNTGDHYVTDYHGSKFRPYDYSYTSRQHSATMSTSDANRLPPVAQKKHQMFGKRSFQEQAGAVAHPQPTPIKYEYRDPSTASSFTSPSQAEGAVSNKIPEMKYSCSVEFGRQNIGRTAIDHIQHNHTYHLPVESTGAMQRPVSRDKLKCRKSESEHLTRDEKRARALNVPISVDDIINLPMDEFNERLSKYDLSEPQLSLIRDIRRRGKNKVAAQNCRKRKLDQILSLADEVRSMRDRKMRLVEEFEYMSSENKRVRDKYQQLYRHVFQNLRDPDGNQYSPFHYSLQITADGSILVVPKANSSISNPEQRKDPSPPAHKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-