Dpun011778.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendrolimus punctatus
Gene Symbol
thap5
Assembly
GCA_012273795.1
Location
CM022556.1:5480206-5509643[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.16 11 7.1 3.5 1 23 477 499 477 499 0.96
2 11 0.0073 0.48 11.4 3.3 1 23 506 528 506 528 0.98
3 11 0.14 9.4 7.3 1.2 1 23 532 554 532 554 0.93
4 11 0.0032 0.21 12.5 5.7 1 23 560 583 560 583 0.98
5 11 0.24 16 6.6 1.9 2 23 588 610 587 610 0.93
6 11 0.25 16 6.5 0.5 3 23 624 645 623 645 0.93
7 11 0.25 16 6.5 0.3 2 23 698 720 697 720 0.96
8 11 0.0035 0.23 12.4 0.2 1 23 735 757 735 757 0.97
9 11 1.9e-06 0.00013 22.6 0.9 1 23 763 785 763 785 0.99
10 11 3.5e-05 0.0023 18.6 0.5 1 23 792 814 792 814 0.93
11 11 0.00064 0.042 14.7 2.3 1 23 820 843 820 843 0.92

Sequence Information

Coding Sequence
atggttAATTGTGCTGTTATTACGTGCAAAAGACGTTCACTCACGTCTAATTTGAAAGATCATGGGGTTTCCTACCACACATTCCCAAAAAACTCACCAATAAGAGAGCAATGGATAAAGTTCTGTGGGCAGAGCAAGAGTTGGCAGCCAACAAAGACTAGTGTTATATGCTCAGAACATTTTACGTCAGAAAGCTTTGAAAATACATCTGACAGACGAAAGTTGGTGGATAATGCTGTGCCAACTGTGAAGTTTTTCCTTTGcaagGGAGGTCTCAGGAACAAGGCATTCATTACTATTACAAGCTCGCCATTTAATGTGTCTAATCAGGCAGCAGCTAAGCTGAAGGATGGCGATGTGAGTGATTTGGACGCTATGTTGGAATCATCTCCTATGCCCCAGATATGCAGAATATGCTTGGCGACAGGTCAGAAACTATACGACATGCAAATGTCCGATTTGTCACAGTATTATAACCAACTCACTGGATTTAATTTGATGAACGACGAAGACTACCCTCAAATGCTCTGTTGGGAATGTGTGTACCGCTTAAAGAACTATATGAAGTTTAGAAAAAAGGCAGTATGTAGTCATGACCTGATGACCGAGGTATTACAGACTTTTGAAAGGCTAACAACCCAAAATCTATCAACAATAGATAGACATAAACACGACTTAATATCAAAATTAGAGATACagaatatagatatacatatgaTAGAAAGTCAAGAAACAGAATTGCCTATAATACATAAACCTGTAATAGACCCTCTCTCAGATTTCGTCTACGAAGAGGACGACGCTATCTCTCTAACAGATTCAGACGAAGAGGAATTCCTTAACGAATATAAAGACCTATTGAAATTAGAAAATGATAATTTAGTCACTAAAAATAAGGAAACTAATTTGATTAATGACAAGGGTGAACTTAAAACTGAGATTAAAGTGGAAGTGGTTAAATGCGAAAAGGCTGATGTCGCATTGACAGGTGATCACAACTTTGACAGCGAGAGAAACTTTGACAGTGATTACAACTTTGACAGCAACAGACACTTTGACAACGATTTGGATGAAGTCAACGACTTTGCTGTCAAGAATGAGGATGTGATGAATTTTGATAATTCTTCCAATGGTAGTATGGATGCGGCGTTGTCGGAGTTGAAGTCTGAGAAGGCTTCGAGCGTTGGTAAAATTAAGAAAGTGGTGAAGGCAGCTGCGAAGAAATTGAAAAGTCCTAAAAAAGTTCAAAAGAAGCATGtaaagaaagagagaaagatAAACCTGAAAAGAGTTCCCAAGATGTCTAGGAAGGAAAGGAGCGAGTTATATTTCGACAAAAATTTGATAGAAATAGTGAACATTAAAGTGGAGGATGCGATTGCTTTGGTTCTGAAGAGAAAGGACTCTGAGCATTTCAAAGATTCAGATTTCAAATGTTTCGAGTGTTTCAAGGGATTCTGTGATAAGGGAGTGTACGACACACATCTGGAGTACCATAGTCTGAAACGTGGGGAGTTCCAATGCCACGTGTGCAAAGTGAGGTTTCCCAAGAAACTTAGCGTAAGGAAGCATCTGAACAACCACCTGTTGAACTATAGTTGTAAGCTGTGCGGGTTCACGACCAAGTCGAGGATCGGTGCCAAAAGACACTCCGAGTATCACAAGAAGGGCACTCTGTATAAATGTCCGCACTGCGATCAAAAGTTTGAGAAACACACGTCGTATTTGGGTCACATAAGAAAGAAACACCCGTCGGACATTGTGTGTGTGCTTTGCGGTTGTTCTTTCGTCAGTATCAAGGGTCTCGATCACCATAAGAAGTTGAAACATCGCTTCGACGACAGGGAGGTTAAAGACGACGGGCCCTTATGTGTGGAGTGCAACGTCAGATTCGTATCCGAGGATGCTCTCATAATGCACAATCATAAGAGGCACAATGATAATgatgtAAGTGATAAAAGTGATAACGAAGTGCCAGAGAAAAGTAATATAGTATCAGATAAGCAAGAGAAGAGTAAATTAGAGAAAGAGAAGAAGAGAGAGAAGAGACTGCCGCCTGGTAAGGCCAAGAGGAAGATCAAGAGGCCACTGAAATGTGAACAGTGTGGCTTAGAACTGACAACGATTAGGGCGTACTATTGGCATTTCCGAAAAGAACACCCGGACAAGACTCGAACCCAGTACTTTTTGGGCAACAATAAGTACATGTGCGAGATTTGTGGCAGATTTTTTCAAAAAGCCGATATACTGGAAGACCACATATTCACGCACACCGGTGTGAAAATATACAAGTGTGACAGATGCGGGAAGGAATTCAACACTAATTTGTCGCTAACAATACATATGAAGATTCACGACACGAAGCGGAAACGGTACGCGTGCCCCGTCTGCGGGAAGACGTTCTTGAGGAGCAACAACCTGAAGCGGCACGAGTATCTTCACACCGGTCTAAGGCCGTTCGCGTGCGATCTCTGTGGAAAATGTTTCCCGACCAACAGCGAGAGGAAAACCCACGTAGAGCATGCCCACTTCAAGAAACCCTGGCCCAAGAGGAACAGGGCGAAAGACAACGTCGAGGGGAGACGGCGGCAGATGGTGTCGAGCGCTTCAACGGAAGTGATGCAACCCCAATGGGGCACCGGAAGCGAGTCGAACGGCGACGACGACGAAAGCCAGGTGCCGAAGATGTATATGTACAtgtag
Protein Sequence
MVNCAVITCKRRSLTSNLKDHGVSYHTFPKNSPIREQWIKFCGQSKSWQPTKTSVICSEHFTSESFENTSDRRKLVDNAVPTVKFFLCKGGLRNKAFITITSSPFNVSNQAAAKLKDGDVSDLDAMLESSPMPQICRICLATGQKLYDMQMSDLSQYYNQLTGFNLMNDEDYPQMLCWECVYRLKNYMKFRKKAVCSHDLMTEVLQTFERLTTQNLSTIDRHKHDLISKLEIQNIDIHMIESQETELPIIHKPVIDPLSDFVYEEDDAISLTDSDEEEFLNEYKDLLKLENDNLVTKNKETNLINDKGELKTEIKVEVVKCEKADVALTGDHNFDSERNFDSDYNFDSNRHFDNDLDEVNDFAVKNEDVMNFDNSSNGSMDAALSELKSEKASSVGKIKKVVKAAAKKLKSPKKVQKKHVKKERKINLKRVPKMSRKERSELYFDKNLIEIVNIKVEDAIALVLKRKDSEHFKDSDFKCFECFKGFCDKGVYDTHLEYHSLKRGEFQCHVCKVRFPKKLSVRKHLNNHLLNYSCKLCGFTTKSRIGAKRHSEYHKKGTLYKCPHCDQKFEKHTSYLGHIRKKHPSDIVCVLCGCSFVSIKGLDHHKKLKHRFDDREVKDDGPLCVECNVRFVSEDALIMHNHKRHNDNDVSDKSDNEVPEKSNIVSDKQEKSKLEKEKKREKRLPPGKAKRKIKRPLKCEQCGLELTTIRAYYWHFRKEHPDKTRTQYFLGNNKYMCEICGRFFQKADILEDHIFTHTGVKIYKCDRCGKEFNTNLSLTIHMKIHDTKRKRYACPVCGKTFLRSNNLKRHEYLHTGLRPFACDLCGKCFPTNSERKTHVEHAHFKKPWPKRNRAKDNVEGRRRQMVSSASTEVMQPQWGTGSESNGDDDESQVPKMYMYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00433211;
90% Identity
iTF_00432664;
80% Identity
iTF_00433211;