Dpun005279.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- ZFY
- Assembly
- GCA_012273795.1
- Location
- CM022535.1:20375555-20396712[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.78 51 5.0 0.9 3 23 34 54 33 54 0.97 2 13 2.7 1.8e+02 3.3 0.9 1 10 63 72 63 75 0.92 3 13 0.00011 0.007 17.1 1.4 1 23 92 115 92 115 0.98 4 13 0.11 7.3 7.6 1.4 2 23 118 139 117 139 0.90 5 13 1.5 98 4.1 0.0 1 23 175 197 175 197 0.80 6 13 0.11 7 7.7 0.2 3 22 230 249 229 251 0.87 7 13 0.8 53 4.9 0.4 1 11 258 268 258 273 0.85 8 13 1.1e-05 0.0007 20.3 0.9 1 23 288 311 288 311 0.92 9 13 0.0033 0.22 12.4 0.1 3 23 358 380 357 380 0.95 10 13 0.00019 0.013 16.3 2.8 1 23 413 435 413 435 0.97 11 13 0.0014 0.091 13.6 1.9 1 23 441 463 441 463 0.96 12 13 3.2e-09 2.1e-07 31.4 0.5 1 23 469 491 469 491 0.98 13 13 0.00073 0.048 14.5 0.3 1 23 497 520 497 520 0.96
Sequence Information
- Coding Sequence
- ATGGCTTTGTCAAGACTTTTGCAACCGGAGTTTCCGGCAATCGAATTAGATCATTCTTTATCTAAAATGACCACAATTGATTTGGTCGGCGGGATACTCTGCCATATCTGTCAACTGATTCTGCCTAATAAGAAAGATTACGACAGCCACTACTTGAACCATAACACAGACCCAAAGAATATAGTATACACCTGTGTTGTGTGCCATAAACAGTTTATTGGCTATGCGATTTTCCGTGGACATTGCTACAACTTGCATGTTACAAAAGATAAATTTAAATGCACACAATGTGAAAAGCGTTTTTCGAAACAATCTATACTTTTGAGCCATATTCAAACAGGACATAATTTGGAATGTAAAGTTTGCCATGAAAGATTTACTGCAAAGGAAACACTACAATTTCACGAGAATTTGCATAAGAAAAAGCTGGTTAAACATACAAACACATGTAACTCTTGCGGCCAAAAAATTCTATCAGCAGAAATGTGCGAAATGCACATTGATGAAATGTCAACCATAACCTTTCCGTGTCCAATATGTGATGAGATAATGCAATCAAAACCTGACGCAATAAAACATGTAGACcaacatttcaataaaataatcaatgaaaATGACTGTAATACAGACCAAGTTGAAGAAAGTAATTTTCCTGATCACAGTTCGATTGATATTTTGGGCATTCTGTGTTTCTATTGTGATTTAACATTCAAGAATCGGCCAGACATTGAGCTCCATTTCATCGAGGAGCACAGCGATAAACCTGTTGTATTCACCTGTAACATTTGCCAGAAAATTTACGACTCTGACAAGTACATTAATTTCCTCAACCACTGCTATGGACATTTGACGaagaataaatttaaATGCACAGAATGCGACAAAACTTTCTCACGGCTCTCGCTCTATATCGTGCACACGGAGGCCTTCCACTCGGTGCCCGGCAGCACGGAATGCGGGAATCGCGATGAGCACAAACCCTTCATATGCTGGTGTTGCAATCACGGGTTCAAGAGCCACAGTCGCTTAGTCACCCATCTCCATCGTGAACATGGGGTTTATAGCGTTCTCTGTCCAGAAGACGGATGCACGCAGAGCTTCGAATCATTAAAAGATTTAATACTGCACCAACGAGAGCATAATCGTATATCAAAGAACGCGTGCCGCTTTTGCAAATTGCAGTTTGCATCTCTCACGTCTTGCGTTAACCATATCGATGTTCATCGTATTAGAAATTACTGCTGTCCGTTATGCAATAAAGACTACAAAGAGAAATACCAGCTTGTAAAACATATTACATCGCACTTTGAATGCGTTTTGCATGTTTGCAAGGTCTGTGGCAAGACATACAACGCGAAATACCGTTTGCAAGAACATAATAAAGTTCACAACGATGTTAAAAAGTATGCGTGCACTCAGTGCGGTAAAACATTCTCGACGCCCTCGAACTTACAACAACACATGAACATCCATACTGGTATGAGACAATATAGATGTATGGTTTGTCTAAAAACATTTGTTTCCGCACCAAACTGGAGGAAACATGTTAGTCGAATACATaatattgatttgaaaaaaGAGAAAATTGATGTAAAAGATCATCAAGTTGAGATAACGCCTGAGAAGCAAAAAATTGAGAATGTAACACCGGCAAAAACGATTTCCAAAATTGCAATGGAAATTACTAGCGCTATGGAATCAGATGAGAGTACAATGGACAGCGTTGCCTCGAGCACTTTGGAAAAGGAAATCGAGattattcaaaacaatattCATACTATAGATGGGGATTTGAGTGATCTACTTTTGCCAATCGGTGCCACATTCATAGAGTCCGAAGAACCAACAGAGCTCCAAACCCTGAAGCCGGAAACGTATCCAACCGAATTAGGCCCAGATTTCGTGACCATGGATGCCGATAACCCAAACGGTGAGTTTATCAATTTAGATGAGAACATATTGCCCTACATTGATCCATTGCTAACGATTAAATACGATAAAAGCCAAAACGACGGCGCGAATTGTAACTACACGAATATCGATAATAATATCGATCTTTCGAATAACTTTCGTATCGACAACGAAGTGAATTGGGAGCCGCCTGTCTTTACTTGTCCATACCCGAATTTGTATCGAGACGAAATGACAGAAGCAAATTTACTTACTTTGATGAAAActgaaactttttaa
- Protein Sequence
- MALSRLLQPEFPAIELDHSLSKMTTIDLVGGILCHICQLILPNKKDYDSHYLNHNTDPKNIVYTCVVCHKQFIGYAIFRGHCYNLHVTKDKFKCTQCEKRFSKQSILLSHIQTGHNLECKVCHERFTAKETLQFHENLHKKKLVKHTNTCNSCGQKILSAEMCEMHIDEMSTITFPCPICDEIMQSKPDAIKHVDQHFNKIINENDCNTDQVEESNFPDHSSIDILGILCFYCDLTFKNRPDIELHFIEEHSDKPVVFTCNICQKIYDSDKYINFLNHCYGHLTKNKFKCTECDKTFSRLSLYIVHTEAFHSVPGSTECGNRDEHKPFICWCCNHGFKSHSRLVTHLHREHGVYSVLCPEDGCTQSFESLKDLILHQREHNRISKNACRFCKLQFASLTSCVNHIDVHRIRNYCCPLCNKDYKEKYQLVKHITSHFECVLHVCKVCGKTYNAKYRLQEHNKVHNDVKKYACTQCGKTFSTPSNLQQHMNIHTGMRQYRCMVCLKTFVSAPNWRKHVSRIHNIDLKKEKIDVKDHQVEITPEKQKIENVTPAKTISKIAMEITSAMESDESTMDSVASSTLEKEIEIIQNNIHTIDGDLSDLLLPIGATFIESEEPTELQTLKPETYPTELGPDFVTMDADNPNGEFINLDENILPYIDPLLTIKYDKSQNDGANCNYTNIDNNIDLSNNFRIDNEVNWEPPVFTCPYPNLYRDEMTEANLLTLMKTETF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -