Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: -
Assembly: GCA_012273795.1
Location: CM022555.1:3948325-3960783[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.013 0.86 10.6 0.1 2 20 240 258 239 260 0.93

2 9 0.0002 0.013 16.3 0.3 3 23 286 306 284 306 0.96

3 9 6.8e-07 4.4e-05 24.0 0.2 1 23 310 332 310 332 0.98

4 9 0.19 12 6.9 0.4 1 23 337 360 337 360 0.94

5 9 0.17 11 7.1 0.4 1 23 366 389 366 389 0.92

6 9 7e-05 0.0046 17.7 0.7 1 23 396 419 396 419 0.98

7 9 2.5e-05 0.0016 19.1 2.3 1 23 425 447 425 447 0.98

8 9 0.00012 0.0079 17.0 6.4 1 23 453 475 453 475 0.98

9 9 4.6e-07 3e-05 24.6 1.1 1 23 481 503 481 503 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.013	0.86	10.6	0.1	2	20	240	258	239	260	0.93
2	9	0.0002	0.013	16.3	0.3	3	23	286	306	284	306	0.96
3	9	6.8e-07	4.4e-05	24.0	0.2	1	23	310	332	310	332	0.98
4	9	0.19	12	6.9	0.4	1	23	337	360	337	360	0.94
5	9	0.17	11	7.1	0.4	1	23	366	389	366	389	0.92
6	9	7e-05	0.0046	17.7	0.7	1	23	396	419	396	419	0.98
7	9	2.5e-05	0.0016	19.1	2.3	1	23	425	447	425	447	0.98
8	9	0.00012	0.0079	17.0	6.4	1	23	453	475	453	475	0.98
9	9	4.6e-07	3e-05	24.6	1.1	1	23	481	503	481	503	0.98

Sequence Information

Coding Sequence: atgatggaTTCAGAAATAATGGTGGAGACGCTACCAATCCTGGGTGTGTGCAATTTGTGTTTTAATGAAGGTGCTGTGAAAAGTATGTTAGTCCCATATACACATTTGGGAAAATCGGAGATATACTCAAAAATGCTCATAAATTGCTTCTCAATCGATATATCACAAATAGATCTAGGAGATACAAAGAGGTTAATTTGTATGCCATGTATTGAAAAACTGAGGGACTGTGAAGCATTCAAATCTTTAGTTGAACAATCACTTAGTATGTTAAAAGAGAGTGCCAGGTTACAAAGAGAAGAGAAAGTGTTAGATGTGAAAGAGGAGATTGGCAATATAGAAGCGGATGACAATGTATTTGATGATGACATACACAAGGATGACGATTTTCATGAGACTGTTTCAGCGCCAAAATTGCCAATAAAGCAAGAACCATCAGAAACTACCCGCAAACGTAAAATCACAAAGAAAGTCTTGAAACTTTCAAAAAAATCACCCGAAACCCAAGACACTGATGCGATGCTCTCCCTCGGGCTGTTCCCATTCAAAATACGCAAAAATAAAACGTACGCTTGTTGTATATGCCACGAGAAAAACACGAATCTAGATGACATGAAGTGTCATATACTGGAACATAGCAAACATCTATTGCATATAGCGTTCAGGAAGATGATCTTTTCGAAGTCACAACGGTTTTACAAGGTCTCGAATCTGTTACGATGCAAGATATGTACCAAGGATGTCTCGAACTATGAGGAATTGAAGGAGCATGTTGATAATTGCACCAGATTGAAGTATGGCCAGAGTAAAAAGTGGAACAATCTGCCGTTCAAGCTGGAGAAGGATCAGCTCGACTGTCCGGTGTGCAAGAAGACGTTTCTGAACTATGTCAGCTTGAATACTCATATGAATGTGCATTATCCAGATTATATATGCGAGAATTGTGGAAAGGCGTTCGCTTCAAAGGCGAGGCTCCGTGGCCATATGAGGACTCACGAAGTGGGCTCCTTCCCTTGCAGGTACTGCGAGGCGGTCTTCGATAGAGTCACCAAGCGGGAAAACCATGTCTCCAAGGAGCACAAAGCGgGCGTCCGTTACGCGTGCAAACGTTGCAACATAACGCTGTCCTCGTTCTACGCCAGACAGAAACACCTCGCCGAAGTGCACAATGAAGAACTCAAAAGGTATAAGTGCAAAGCTTGCCCACAAAGTTACATAACTCCAGGTCATTTATCGAGTCACGTGAGACGAGATCATCTGAACGAGAGAAATCACAAGTGCGACAAATGTGACCTAGCATTTTACACTAAAAACGCCTTAAAAATGCACATGATAAAACATGACGGGGAGCGTATACACACCTGTCACGTTTGTCAGAAGTCCTATCAAAGGAAGAAGACGTTAAGAGAACATCTCAGGATTCATGATAACGATAAAAGATTTGTTTGTCCGGTCTGCGGGAGAGCTTTCACTCAGAAATGTACGTTGAAAGGACATATGAAGGTGCATGACAGGAAAGTGGATGTCGATGTGAAAAGGAAGGTCGAGGATGTTGTACATTACGATATGGTACGTCTCTAG
Protein Sequence: MMDSEIMVETLPILGVCNLCFNEGAVKSMLVPYTHLGKSEIYSKMLINCFSIDISQIDLGDTKRLICMPCIEKLRDCEAFKSLVEQSLSMLKESARLQREEKVLDVKEEIGNIEADDNVFDDDIHKDDDFHETVSAPKLPIKQEPSETTRKRKITKKVLKLSKKSPETQDTDAMLSLGLFPFKIRKNKTYACCICHEKNTNLDDMKCHILEHSKHLLHIAFRKMIFSKSQRFYKVSNLLRCKICTKDVSNYEELKEHVDNCTRLKYGQSKKWNNLPFKLEKDQLDCPVCKKTFLNYVSLNTHMNVHYPDYICENCGKAFASKARLRGHMRTHEVGSFPCRYCEAVFDRVTKRENHVSKEHKAGVRYACKRCNITLSSFYARQKHLAEVHNEELKRYKCKACPQSYITPGHLSSHVRRDHLNERNHKCDKCDLAFYTKNALKMHMIKHDGERIHTCHVCQKSYQRKKTLREHLRIHDNDKRFVCPVCGRAFTQKCTLKGHMKVHDRKVDVDVKRKVEDVVHYDMVRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00432529;
90% Identity: iTF_00432529;
80% Identity: -