Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: -
Assembly: GCA_012273795.1
Location: CM022555.1:1402937-1411844[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0033 0.22 12.4 0.4 1 23 326 348 326 348 0.98

2 10 5 3.3e+02 2.4 0.8 2 23 375 397 374 397 0.93

3 10 0.00011 0.0075 17.0 0.1 1 23 420 442 420 442 0.98

4 10 0.00025 0.017 16.0 0.2 1 23 446 469 446 469 0.97

5 10 0.00041 0.027 15.3 1.4 1 23 474 497 474 497 0.95

6 10 0.21 14 6.8 1.3 2 23 504 526 504 526 0.90

7 10 2.1e-05 0.0014 19.3 4.4 1 23 533 556 533 556 0.98

8 10 0.00063 0.041 14.7 2.3 2 23 563 584 562 584 0.97

9 10 3.8e-06 0.00025 21.7 2.5 1 23 590 612 590 612 0.98

10 10 8e-06 0.00052 20.7 3.4 1 23 618 640 618 641 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0033	0.22	12.4	0.4	1	23	326	348	326	348	0.98
2	10	5	3.3e+02	2.4	0.8	2	23	375	397	374	397	0.93
3	10	0.00011	0.0075	17.0	0.1	1	23	420	442	420	442	0.98
4	10	0.00025	0.017	16.0	0.2	1	23	446	469	446	469	0.97
5	10	0.00041	0.027	15.3	1.4	1	23	474	497	474	497	0.95
6	10	0.21	14	6.8	1.3	2	23	504	526	504	526	0.90
7	10	2.1e-05	0.0014	19.3	4.4	1	23	533	556	533	556	0.98
8	10	0.00063	0.041	14.7	2.3	2	23	563	584	562	584	0.97
9	10	3.8e-06	0.00025	21.7	2.5	1	23	590	612	590	612	0.98
10	10	8e-06	0.00052	20.7	3.4	1	23	618	640	618	641	0.96

Sequence Information

Coding Sequence: atgaaatctaACCAATCCTTAAAACTGGTATTGAAGCCATAcggtaaaaaagtattttccttTTTTGAATATAGAAAATCAGTGACAGACGACAGTTATTATGTCAAGTTGACTGTTGACATTTCCATAGCAAAATTTggcaaaaaaattgttttacaaaTTGTGGTAATTacacaaacaaaaacaatatacctaattaattatataatggaAGATTTAAACGAATACACAATATACGGCAAATGCCGGTGCTGCTTAACCATCGGTAATCACAGAGGTTTGAACGAGGAATACTTCCGAAATGGGTCTCGAGAAGTATATTTCGAAACTTTTAtcaactgttttaatttaatcCTTTCAATCAATCCAAACATAACACCATTGATATGTTCAACCTGTGTATATCGATTGCAAGAGGCAAACAATTTTAAAACCCTAGTAATAAACAATGAAAAAGCTCTGCTTAATGTATTAAGTGGTGAAACACCAAGCCTTGGACTCCAGTGTGATCCTTTGAGTTCTTTTGTCACTGTGCCCATAGAAACTCTAGACAGCAGTAAGACTATAAAATCAGAATTTGGTAGTGATCTCAAATTGGAAGCAGAACCTTATGAGGATAATGATACAGAGGAGAATGTTGAGGCGCCAGTAAAATTCGAAGCATGCAAAGATTTTGATATTATTGAAGGCGAAAAGGAGTTGTTGGGGAGATTTCCAAAGAGTACTCTAAAATGTTTACCGAACAGGGcaaatatgtacaaaatatgTCCTCAATTTGTTTGGCATTTAGACCAAATTAAagataaAGCAATAACAGCACAGACGATAGAAAAAAAGTTTTACCATAAACAAGAGAGCCCTAGATTAACAAAGAACTGTGTTTATATAACAGAGAAACTTGCACATGCTATAAATGCTTGCACGATCCTGGAACACTCCAACGCCGTTGCGTTCAAGTCAAAGATGCGTTCGGGATATCCCTGTTTTTACTGTCGGGAGATATATGAAAATATGGATTTGTTAAGAGAGCATCAACTCAAACATCCGAAGgagaatttattcaaattattaaaaaaatatcggtcGCATTGCTTAGTGGTGTACGCGGATGTGACGaatttaaaatgtgtgatatgtgACAGTGACATTAAGAATTTGAAAGAGCTCAAGTGTCATCTTAAAGTGGTTCATGGGAAGAGAATATATGAACAGTTCACGGACAGGGTGATACCTTTCAAGTTGGTTGGTAATAGTGATTATGAGTGTCAAGTGTGTGGATTTAATTTCGAAACGTTTGGGGCTGTTGAGAGGCATATGAATGTACAttatagGAACTTTGTATGCGAGAAGTGCGGTGCGGGGTTCATCACAAACCAACGTCTTAAAGTACATATTTATACACAGCACAAGGAAGGCACGTACCCATGCGAGAAATGCAAGAAAACATATCCCACATACTCTAAATACAAAGTGCATTATGACGTGATGcacaacaataaaaaaccaaacaCTTGCGGTAAATGTTCAGAGAAATTCGTCGATTACTTTACAAAACAGAAACATATGGTCGATAAACACGGTATAAAACCAATTTTGTATAAGTGTAACGTATGCGAGAAAGCGTTCACTCGACGCTACACCCTGTCATTGCATTTGAAACGTTGTCATTTAGACGAGAAAGATATAAAATGTGATTTCTGTCCATATATGTGTTTTACGAAGACTGAATTGAGAGCGCATATGCTGAAACACGGTGCTGAGAAGGCGCATGAATGTGTCATATGCAAGAAGTCGTATGCGAGAAAGAAAACCTTGAAAGAGCATATGCGCATACATACTAATGATAGGCGGTATGTGTGTTCGGTGTGCGGACAGGCGTTTATTCAAAATTGCAGCTTGAAGCAGCATTTGAAAACGCATCATGGTAAACAAGATTTCTTATTAAATGTGggtgtataa
Protein Sequence: MKSNQSLKLVLKPYGKKVFSFFEYRKSVTDDSYYVKLTVDISIAKFGKKIVLQIVVITQTKTIYLINYIMEDLNEYTIYGKCRCCLTIGNHRGLNEEYFRNGSREVYFETFINCFNLILSINPNITPLICSTCVYRLQEANNFKTLVINNEKALLNVLSGETPSLGLQCDPLSSFVTVPIETLDSSKTIKSEFGSDLKLEAEPYEDNDTEENVEAPVKFEACKDFDIIEGEKELLGRFPKSTLKCLPNRANMYKICPQFVWHLDQIKDKAITAQTIEKKFYHKQESPRLTKNCVYITEKLAHAINACTILEHSNAVAFKSKMRSGYPCFYCREIYENMDLLREHQLKHPKENLFKLLKKYRSHCLVVYADVTNLKCVICDSDIKNLKELKCHLKVVHGKRIYEQFTDRVIPFKLVGNSDYECQVCGFNFETFGAVERHMNVHYRNFVCEKCGAGFITNQRLKVHIYTQHKEGTYPCEKCKKTYPTYSKYKVHYDVMHNNKKPNTCGKCSEKFVDYFTKQKHMVDKHGIKPILYKCNVCEKAFTRRYTLSLHLKRCHLDEKDIKCDFCPYMCFTKTELRAHMLKHGAEKAHECVICKKSYARKKTLKEHMRIHTNDRRYVCSVCGQAFIQNCSLKQHLKTHHGKQDFLLNVGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433409; iTF_00432541;
90% Identity: iTF_00432541;
80% Identity: -