Dpun012019.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- ZNF831
- Assembly
- GCA_012273795.1
- Location
- CM022556.1:3397547-3413274[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 5.4e-05 0.0035 18.1 0.8 2 23 141 162 140 162 0.97 2 11 9.3e-05 0.0061 17.3 0.7 1 23 168 191 168 191 0.97 3 11 7.7e-05 0.005 17.6 2.7 1 23 200 222 200 222 0.98 4 11 8.1e-05 0.0053 17.5 3.3 1 23 228 250 228 250 0.96 5 11 0.00012 0.0075 17.0 1.5 1 23 256 278 256 278 0.96 6 11 2.1e-05 0.0014 19.4 0.9 1 23 284 307 284 307 0.95 7 11 1.7e-05 0.0011 19.7 2.3 1 23 313 335 313 336 0.94 8 11 2.6 1.7e+02 3.3 0.1 5 23 342 360 340 360 0.88 9 11 0.014 0.89 10.5 5.7 2 23 367 389 366 389 0.94 10 11 0.76 50 5.0 1.0 1 19 395 415 395 420 0.82 11 11 0.00018 0.012 16.4 0.9 1 23 426 449 426 449 0.92
Sequence Information
- Coding Sequence
- ATGAATCTGAAAGTTTGCCGGCTGTGCTGCGTTAACTACGGAACTGCAAATATATTCCAAAACGATAcacaaatatatgaaaaaatattacattgctGTGTAAATATTAAGGTTCATGAATGGGACGAACTGCCCGGAGGTATATGCGATAGCTGTCAGCAGGATTTGGATAGCTGTTACCAATTCATACTGAAATGCGAAGCTTCTGATAAGAAACTCCGGTCAAATGTTTGTCCAACAGTAAACCAAATACCTAAGTTTGAACCCAAAGTAGAAGTGAAAGTCGAATTTGAAAATTCAGACGAACCAACCGACTTTGACGACGTCTTACCCAATGATAATAAAGCAACTGATTTGATTAAAGAACATCGTACTAAGCGGAAATATACAAagcgtaaaaaatataaaaattcagatAGTGTCTGCTTAACTTGTGGTAAGAAGTGTAGTTCACCATCAGTTTTGGTAATACACATGCGGTCTCATACAAATGAGAAACCGTACCAATGTGCGTCTTGTGTCAAAAGGTACAAAGATAGAGGTTCCCTAAACAGGCATATCGAGAGAAATCATGTTACAACGAAGAGAGAAAACAAGTTTATTTGCGAAACATGCGGGAATAAGTTCTCATCAAAACATTCTATAAAGATTCATCTACGTACTCATACCGGAGAAACACCTCACGCATGTACGTTTTGTCCGAAACGTTTCACACAAATTAGTTCCTTGCTACGACATAAAATGAGGCATACAGGTGTACGTCCACATAAATGTGTCATATGTTCTAAAAAGTTTTACACCAAAGTCGAACTGAAGAGCCATGCCGCAGTACATACATCAGAAAAGAACTTTTCCTGTCCGATCTGTAATGTTACTTTCAAATACCTTAGTAATGTAAAGAAACATGTAAACTTAAAACATAATCATCCGCGCTCTTTTATATGTAATCAATGTGGTCGTACTTTTAATACGAAGGGGGCATTGAAATCGCACAGTGATAGACATCATTCAGAAAAGTCTGGCTATTGCGATGTTTGTAGTAAAAATGTGGCCAATATTGAAGTACATACCTTGAGGCATACTGGTGAAAGACCTTTAAAATGCGAGCACTGCTCTAGCAGTTTCTTCCAGTTGAGAGATTTAAATCATCATATGAATTTCAAACATACTCAAACGGATAAGTATAAGTGCTCCGTAGAAGGATGCACAATGTGTTTCCCTTCTAAACCAATGCTCGATTTTCATACGGCAAAAGTCCATAGCACTGAAATACCCTTTCCGTGTGATAAATGTTCTAGAggattttatagaaaaaatgatTTGGCTAGGCATAAACTTGGTACACACAAGGAAAGACTTCTTTAA
- Protein Sequence
- MNLKVCRLCCVNYGTANIFQNDTQIYEKILHCCVNIKVHEWDELPGGICDSCQQDLDSCYQFILKCEASDKKLRSNVCPTVNQIPKFEPKVEVKVEFENSDEPTDFDDVLPNDNKATDLIKEHRTKRKYTKRKKYKNSDSVCLTCGKKCSSPSVLVIHMRSHTNEKPYQCASCVKRYKDRGSLNRHIERNHVTTKRENKFICETCGNKFSSKHSIKIHLRTHTGETPHACTFCPKRFTQISSLLRHKMRHTGVRPHKCVICSKKFYTKVELKSHAAVHTSEKNFSCPICNVTFKYLSNVKKHVNLKHNHPRSFICNQCGRTFNTKGALKSHSDRHHSEKSGYCDVCSKNVANIEVHTLRHTGERPLKCEHCSSSFFQLRDLNHHMNFKHTQTDKYKCSVEGCTMCFPSKPMLDFHTAKVHSTEIPFPCDKCSRGFYRKNDLARHKLGTHKERLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00432505;
- 90% Identity
- iTF_00432505;
- 80% Identity
- -