Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: -
Assembly: GCA_012273795.1
Location: CM022555.1:1165480-1175706[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00021 0.014 16.2 1.8 1 23 244 266 244 266 0.98

2 10 0.51 33 5.6 0.4 3 23 290 311 288 311 0.93

3 10 1e-05 0.00066 20.3 0.6 2 23 333 354 332 354 0.96

4 10 0.0001 0.0065 17.2 0.4 1 23 358 380 358 380 0.99

5 10 0.0013 0.087 13.7 0.3 1 23 387 410 387 410 0.96

6 10 5.2 3.4e+02 2.4 0.2 3 23 418 439 416 439 0.89

7 10 6.5e-05 0.0042 17.8 1.7 1 23 445 468 445 468 0.97

8 10 0.00017 0.011 16.5 1.5 1 23 474 496 474 496 0.98

9 10 2.7e-06 0.00018 22.2 1.0 1 23 502 524 502 524 0.99

10 10 3e-07 1.9e-05 25.2 3.6 1 23 530 552 530 553 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00021	0.014	16.2	1.8	1	23	244	266	244	266	0.98
2	10	0.51	33	5.6	0.4	3	23	290	311	288	311	0.93
3	10	1e-05	0.00066	20.3	0.6	2	23	333	354	332	354	0.96
4	10	0.0001	0.0065	17.2	0.4	1	23	358	380	358	380	0.99
5	10	0.0013	0.087	13.7	0.3	1	23	387	410	387	410	0.96
6	10	5.2	3.4e+02	2.4	0.2	3	23	418	439	416	439	0.89
7	10	6.5e-05	0.0042	17.8	1.7	1	23	445	468	445	468	0.97
8	10	0.00017	0.011	16.5	1.5	1	23	474	496	474	496	0.98
9	10	2.7e-06	0.00018	22.2	1.0	1	23	502	524	502	524	0.99
10	10	3e-07	1.9e-05	25.2	3.6	1	23	530	552	530	553	0.96

Sequence Information

Coding Sequence: ATGAATGACATGGCGACTTCTACGGCTCCAGTGAAGGGTAAAGGCCCTACAGTAGATCCAGCATTGTGTCGATGTTGTCGTTCTATTAAGAAATGTCGGCTTTTAACAGTCGAATACGAGTGGATGGGCCAGAAGGAAATTTATTCCGATATGTTTATGGATTGTTTTGGACTTGTGCTTTCTCAACTAGATGGTGACAGCAAGGATAAATGTGTGTGTGCGACATGTGTGGTCCGGCTGAGAGAGGCTTGTGCGTTCAGGCAACAGGTGCTGCAATCCGAAGACGCCTTCCTCAGCGCACTTGTACAACGGAAAGAAGAAAGTCCGAGCaagtttgaaattgaaattaaaacggAGCCCGTCACAGATGATTTGGATGTTCAAATGGATGACAGAGATGATTTATCAATGAACGATGAAGATGAGGAAGACATAAAACTGGCGACGATAAAAGAGCTGCAGAAGGCGAAGTTAGCGGCCTGCAAGAGCGAGGGGCGCAGAAGAGAGCTGCGCAGCAAAACCAAGTCGTACAAGAAGAAGAACCTCTTCATACAGATGAAGAGGCTGCAAGAGAAGCTCGATCAGATGGTGGACAAGCCTCTGAAATCAGAACCAAAGCAAAAGAAGCCAAAACGCTCAGAAAGCGATAGTGTTAATATGGCGTACGATAATACAGTTGCCATTGTCAAAAACTCATACGTTTGTCCATTTCAGAACAGAATCAGCTTCTATTATTGCTATTATTGCAAAGATCAGTTCACAAATCCATCTGAGCTTCGAGAACATACTAACACCCACGATCCGAACACATTCGAATCCGTAATGGAGAACAAAAAGATACCAAAAGTCGATATAACCCGAATCGATTGTCGATTATGCGACGAGAAAATCGATACAATCGAATCTCTAAAAAGTCACTTGTGTCTCGTGCACAAAAAGTCTTTACACTCAGTATCGAATGAATTTGTCAAATTCAAATTGACAATGAACAACCTTAAATGTACTGAGTGCAACGAAACGTTTCCCTATTTTGACAGTTTGACGAAGCACATGAACGGCCATTTTGGAACGTACGTCTGTGACATGTGCGGCGCGTGTTTCATGGAAATTGCGTCCTTAAGAACGCACATTAGGAGTCATAATAAAGTGGAGCTGAACTTCCCGTGTGAGATATGCGGgaagaatttaaaaagtaaatacagCAGATATTTGCATATAGCAACGGTTCATGAGAAAACGCCGACGGTGAACTGTTACAAGTGCGAAGCTAGCTTTCTCTCTTACGCACAAAGGAATAGGCATTTGATAGAAGCGCACGGCGATAAAAGAACGTTTCCGTGCaaattatgtgataaagtttATAACAGACGTAAAACGTTAATGGAACACAACCGAAGGAATCATTTGAAAGTGTACAACCATCAGTGCGATCTGTGTGACCAGAAGTTTTATTTGCCGTCGCGATTAAAGGAGCATATGGCAACACATACGGGGGAGAGGAATTTCAGATGTGAATTCTGTGATAAGAGTTATCCGAGATTGCAGTCGTTGCAAGAACATATTAGATCTCATAACAACGAAAGAAGATATAAGTGTGATGTGTGCAATACGACGTTTACCCAAAATGGAAGTTTGAAGAACCATATGAAGAGTCATCACCAATTTGATTTGGACGCAAGTTTTAGTTAA
Protein Sequence: MNDMATSTAPVKGKGPTVDPALCRCCRSIKKCRLLTVEYEWMGQKEIYSDMFMDCFGLVLSQLDGDSKDKCVCATCVVRLREACAFRQQVLQSEDAFLSALVQRKEESPSKFEIEIKTEPVTDDLDVQMDDRDDLSMNDEDEEDIKLATIKELQKAKLAACKSEGRRRELRSKTKSYKKKNLFIQMKRLQEKLDQMVDKPLKSEPKQKKPKRSESDSVNMAYDNTVAIVKNSYVCPFQNRISFYYCYYCKDQFTNPSELREHTNTHDPNTFESVMENKKIPKVDITRIDCRLCDEKIDTIESLKSHLCLVHKKSLHSVSNEFVKFKLTMNNLKCTECNETFPYFDSLTKHMNGHFGTYVCDMCGACFMEIASLRTHIRSHNKVELNFPCEICGKNLKSKYSRYLHIATVHEKTPTVNCYKCEASFLSYAQRNRHLIEAHGDKRTFPCKLCDKVYNRRKTLMEHNRRNHLKVYNHQCDLCDQKFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHIRSHNNERRYKCDVCNTTFTQNGSLKNHMKSHHQFDLDASFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433391; iTF_00432498;
90% Identity: iTF_00432498;
80% Identity: -