Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: -
Assembly: GCA_012273795.1
Location: CM022537.1:14897292-14898944[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0011 0.071 14.0 1.9 1 23 74 97 74 97 0.96

2 11 0.00025 0.017 15.9 2.2 2 23 121 143 120 143 0.95

3 11 0.022 1.4 9.9 0.1 2 23 149 171 148 171 0.93

4 11 0.021 1.3 9.9 0.1 1 21 215 235 215 236 0.94

5 11 0.00031 0.02 15.7 0.6 1 23 246 268 246 268 0.93

6 11 2.8e-05 0.0018 19.0 0.3 2 23 355 377 355 377 0.93

7 11 3.4e-07 2.2e-05 25.0 1.4 3 23 384 404 383 404 0.98

8 11 0.0021 0.14 13.1 1.1 1 23 423 445 423 446 0.95

9 11 0.047 3.1 8.8 0.0 1 23 468 490 468 490 0.97

10 11 0.00082 0.054 14.3 0.3 1 23 496 519 496 519 0.96

11 11 7.8e-05 0.0051 17.6 0.7 1 23 527 550 527 550 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0011	0.071	14.0	1.9	1	23	74	97	74	97	0.96
2	11	0.00025	0.017	15.9	2.2	2	23	121	143	120	143	0.95
3	11	0.022	1.4	9.9	0.1	2	23	149	171	148	171	0.93
4	11	0.021	1.3	9.9	0.1	1	21	215	235	215	236	0.94
5	11	0.00031	0.02	15.7	0.6	1	23	246	268	246	268	0.93
6	11	2.8e-05	0.0018	19.0	0.3	2	23	355	377	355	377	0.93
7	11	3.4e-07	2.2e-05	25.0	1.4	3	23	384	404	383	404	0.98
8	11	0.0021	0.14	13.1	1.1	1	23	423	445	423	446	0.95
9	11	0.047	3.1	8.8	0.0	1	23	468	490	468	490	0.97
10	11	0.00082	0.054	14.3	0.3	1	23	496	519	496	519	0.96
11	11	7.8e-05	0.0051	17.6	0.7	1	23	527	550	527	550	0.96

Sequence Information

Coding Sequence: ATGCACAAGAAGAATATTTGGAAACACAAAAAAGTACTTCACGCCGATATACTGAATGATAGGAATGATAGTGAAGAAAACACCATGCAAGCATCAACCGAGGAGGAAGAGTATAACGTTGACGAAAATGGTGTGATGCTGTCGACACCGCAATTTAATAGCTTTAACTTTACTAACTTTACCAATAGTACTCCTCAGAGTCAACCAGAACAAATGTCTTTCTCATGTGAATTATGCTTTAAACGATTTCCCCTTAAAACAAGTCTATGGAAACACAAACGCGCCAAACATGGTATTTCCGGTTCTGATGCTGGGGGTAGTTCCGAACATCAAGCTCCAAGTGAAGGAAGTAGCAGATCTAGCTGTACTATTTGCAAAATATCATTTACAGACAAGAAATCATATTACCGACACAGGAAGAATGTTCACAAATCATCTGtacaaatgtgtaaaatatGTGGCAAACCTCTAAACTCTACATTAGAACTTTATGAGCATTTGAAGGCCGCCCATGCTCGTGAGCTTTTGGGCTATAATTCCAATCAAGGATCCAGTAAGTCTCAAGACATGGTACCAGAAACTGAACCTGAATATGAAAATGATCAAGAATCCAATGATCCAAGTGTGGATTACCAAGCTCGCTATCCCTGTGATGCTTGTGGCAAACAATTTGTCGGTTTGCTTGCATTGCAGAATCATCAATGTATTAATCAACTTTCCTCAACGCCTCAAACATTTGACTGCGAAATTTGTCATAAGAGTTACACTTCAATCGCAGCTTTGAAGAGTCATCGCGGATGGCATTTACGGTCGCCCGATGGTAAAGCCGCAGCAAACAACAGTGGTCTCTGGATGCCGCAACACAAAGTAACTAACAAAGTGAGTAAATATGAGGTGGTCGATGCGGTTCAGCTAGCTCGCGTACAGCACACAACACCTACAACAATCGTCAAGAGGAAGCTTCCAGCGGAAGTTGAGGTGACCGTCGTCAATCCCAATAAGAAGTTGCGTTCGGATGATTCCTCGGAGTTGGATCCCAGTTTGGGACCGCTCGAGGATAGATATTGCACGATATGCGACAAGGAGTTTACGAAGCGTGCTGCCTACCAAAGACACATGGATGAAGTTCACCAACCTAATTCGGTGTTCTGCCCAGTGTGCGAGAAGAGTTTCACGCGGAAGTCCACATTGCTGATTCACATGAAGAAACATTACGACGGTGGAGAGGGGAGTAGTTCTGGCGCTGTCGCCCAGACCGAGGACGAGTACTCTTGCGATTTCTgtgggattcaatttgatagTGAGCAGGCGTATAGAGCTCATCGAGCTAAGCATCATGGTGAAGAGTCTGGAGGTGAAAGTGAGGACGAGGGCCTCGTGCCGGTGGCGCAGCCTGGCGAGTTCACCTGTGCACAATGCGGCGATGGGGTGGCAACACCTCGCGATTTAATCGCCCACCGAGCCATGCACGCGACGCCCACCAAATTCTACTGCAACATTTGTAACGTTTACTTCGCTAGGGCCATAGACCTCTCCTCGCACACTCGGGCGAGACACGCGGACAacgaaaaagtattttttccaTGTGCCATGTGTGACAGGTTTTATATGAACAAGAAGAGTTTACAGAGACACATTGAGATGTCCCACTGA
Protein Sequence: MHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEEEYNVDENGVMLSTPQFNSFNFTNFTNSTPQSQPEQMSFSCELCFKRFPLKTSLWKHKRAKHGISGSDAGGSSEHQAPSEGSSRSSCTICKISFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQGSSKSQDMVPETEPEYENDQESNDPSVDYQARYPCDACGKQFVGLLALQNHQCINQLSSTPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKYEVVDAVQLARVQHTTPTTIVKRKLPAEVEVTVVNPNKKLRSDDSSELDPSLGPLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCEKSFTRKSTLLIHMKKHYDGGEGSSSGAVAQTEDEYSCDFCGIQFDSEQAYRAHRAKHHGEESGGESEDEGLVPVAQPGEFTCAQCGDGVATPRDLIAHRAMHATPTKFYCNICNVYFARAIDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -