Basic Information

Insect: Dendrolimus punctatus
Gene Symbol: -
Assembly: GCA_012273795.1
Location: CM022542.1:14389806-14398887[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0047 0.31 12.0 0.7 1 23 205 227 205 227 0.98

2 10 0.0001 0.0068 17.2 2.1 2 23 235 256 234 256 0.95

3 10 0.00014 0.009 16.8 1.4 1 23 262 284 262 284 0.99

4 10 0.016 1 10.3 2.4 2 23 291 312 290 312 0.96

5 10 5.4e-06 0.00035 21.2 2.7 3 23 320 340 318 340 0.95

6 10 4.7e-07 3.1e-05 24.6 0.1 1 23 346 368 346 368 0.98

7 10 0.00026 0.017 15.9 2.5 1 23 374 396 374 396 0.95

8 10 0.00029 0.019 15.7 4.5 1 23 402 424 402 424 0.96

9 10 1.5e-06 9.9e-05 22.9 0.7 1 23 430 452 430 452 0.95

10 10 0.0034 0.22 12.4 0.4 1 23 458 480 458 480 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0047	0.31	12.0	0.7	1	23	205	227	205	227	0.98
2	10	0.0001	0.0068	17.2	2.1	2	23	235	256	234	256	0.95
3	10	0.00014	0.009	16.8	1.4	1	23	262	284	262	284	0.99
4	10	0.016	1	10.3	2.4	2	23	291	312	290	312	0.96
5	10	5.4e-06	0.00035	21.2	2.7	3	23	320	340	318	340	0.95
6	10	4.7e-07	3.1e-05	24.6	0.1	1	23	346	368	346	368	0.98
7	10	0.00026	0.017	15.9	2.5	1	23	374	396	374	396	0.95
8	10	0.00029	0.019	15.7	4.5	1	23	402	424	402	424	0.96
9	10	1.5e-06	9.9e-05	22.9	0.7	1	23	430	452	430	452	0.95
10	10	0.0034	0.22	12.4	0.4	1	23	458	480	458	480	0.95

Sequence Information

Coding Sequence: ATGGAGGAAcctaaatatataattcaatatAGGAACATAGGAAACTGTTGCCGAACTTGTTTAGAAGATTtatcaaataaagaaatatttgatcTATTCTCAGATATCAGTGATTCTGTAAACGTTGCCGAAATGCTTAAAACATGCATTTCTGTAAAGATTTCACCACATGACAAGTTACCAAAGAATCTGTGTAAAACTTGTTATAATAGTTTAGTTAGTTTTCATGCTTTTAAAATTCAAGCACAAAACATTGACCAAAAATTAAATGAGCATTTCTGTATGAATGTAGTATGTAATGAAAACAACATTGAAATTAAAGATGAAACTGTGCTTGATGCCAAATGTGAGGATTTTATGAATGAAATGGATGATTACGATAATTTTGCACATAGAAATACTGAAAATACAGACATATTCTCTGTGCCACTTCCTTCAACAGTAGATAATGTGttagattataataatcattGTGAATCTAATAACAGTGTGCCATTAGAAACTTCTATAGTTAAATCAAAGAGAATTGGTAAGCACAAAAATTTACAGGAAGCAGAAACTAAAGCATTTGTTAATAAAAGCCAAAGTACTGAAAAAGAAACACATGAAAGTTTTGAATGTGATATTTGTGCAGCAAAATTCAAAACAATGAATTCACTCTCGGGTcataaaagaaaacatacaaCCAAAGGCCGAGTTTTGTCATGTGTTTCATGTGGTAAAATCTTTAAGAAAATAAGCCATTTGAAAAGGCATGAATTGACTCATGACACTAAAAAGCCTTACAAATGTATGTTATGTAAGAAATCTTATAAGAGAATGGTGCTTTTGGAGGAACATTTGAATAGACATAAAGATGGTACCGCCTGCAGGTGTCCATTCTGTCCAAAATCATTTTGGCACATGGCAACACTGGCAGAACATGTGAAGAGGCACACCAATAGCATGCAACACTTGTGTTCAGTCTGCGGTAAAAAATTTAGCTCGACTGGAAACTTGAAACAGCATCAGTTGAGGCATGCTGGAGAAAAGAGTTATGCTTGTGAAATGTGTCCTAAAACATTTGTTAGTAAAGGTGAACTGAAGACGCATATAATCACACACACTGGCGAAAGGGTGTTCAGTTGCGAAAAATGTCCTGCAAAATTTACTAGGCGCAGTACATTGCTGAAACATAACTTTAGGCATCTGGGGATAAAGCCATATAATTGTGATACATGCCCTATGAAGTTTATTACCAAGAGTCATTTAATTCGCCATTGTCGAGTCCACACTGGTGAGAGACCGTACCTTTGTGAGATCTGCGACCGTACATTTACGCAGAGCAATGATCTCGAAAAACACAAAAGAGCACATTTCGGCAACGAAATATATGAgTGCCCCTTATGCTTTCAACGCTTCCGCCTGAAGATGGAACTAATTCAGCACGAATCGGAGCACTTTATATCATCAAAACTACAACAAATGCGTGTTAATACAGAAAATGTCATAGCAACACCACTGGGACTTGGTAACATTGAAAACTTGGCCGAAACAAATAGTGGGATCTTGATTGAACATTGA
Protein Sequence: MEEPKYIIQYRNIGNCCRTCLEDLSNKEIFDLFSDISDSVNVAEMLKTCISVKISPHDKLPKNLCKTCYNSLVSFHAFKIQAQNIDQKLNEHFCMNVVCNENNIEIKDETVLDAKCEDFMNEMDDYDNFAHRNTENTDIFSVPLPSTVDNVLDYNNHCESNNSVPLETSIVKSKRIGKHKNLQEAETKAFVNKSQSTEKETHESFECDICAAKFKTMNSLSGHKRKHTTKGRVLSCVSCGKIFKKISHLKRHELTHDTKKPYKCMLCKKSYKRMVLLEEHLNRHKDGTACRCPFCPKSFWHMATLAEHVKRHTNSMQHLCSVCGKKFSSTGNLKQHQLRHAGEKSYACEMCPKTFVSKGELKTHIITHTGERVFSCEKCPAKFTRRSTLLKHNFRHLGIKPYNCDTCPMKFITKSHLIRHCRVHTGERPYLCEICDRTFTQSNDLEKHKRAHFGNEIYECPLCFQRFRLKMELIQHESEHFISSKLQQMRVNTENVIATPLGLGNIENLAETNSGILIEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433381;
90% Identity: iTF_00433381;
80% Identity: -