Dpun020382.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendrolimus punctatus
Gene Symbol
-
Assembly
GCA_012273795.1
Location
CM022553.1:11345055-11373432[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 4.3 2.8e+02 2.6 0.6 3 17 59 73 57 74 0.86
2 12 0.062 4.1 8.4 0.1 1 23 458 480 458 480 0.96
3 12 2.6e-05 0.0017 19.1 2.0 1 23 495 517 495 517 0.97
4 12 0.00083 0.054 14.3 5.4 1 23 523 545 523 545 0.99
5 12 0.00017 0.011 16.5 1.1 1 23 552 574 552 574 0.99
6 12 1.4e-06 9.5e-05 23.0 0.4 1 23 580 602 580 602 0.95
7 12 0.00012 0.0077 17.0 1.1 1 23 608 630 608 630 0.98
8 12 4.9e-06 0.00032 21.4 1.4 1 23 636 659 636 659 0.96
9 12 0.00031 0.02 15.7 8.0 1 23 665 688 665 688 0.96
10 12 5e-05 0.0033 18.2 0.7 2 23 695 716 694 716 0.97
11 12 3.4e-06 0.00022 21.8 0.7 1 23 722 744 722 744 0.98
12 12 0.0016 0.1 13.4 0.4 1 23 750 774 750 774 0.94

Sequence Information

Coding Sequence
ATGAACCAATGTTGCTTAATATGCAATGCCAAAACTGGTGCGACATTAAGGAGCTCTGCTATCATACTATTTGGAGAACATACGAACCTCCCATCAGGCAGGAAGCTGCCGGAAGTAGTAAGCGAGATAATTGATAAGCCCGTTGTGAAGGACAATGTGCACTCCGATATAATATGCAAGAAATGCTCTAAGATGTGCAATGAGTATGATTCCTTGCAATTAAAATTGTACGAGATGAGAAATTATATGCAGGAACAGTTCAAAACGTCAATACAGGGTTATGAACTAACATACAACAATTACACTACCGATGTTAAGAAATCATCGAAGAAATCGCAACAGAGTGTGATCAAAAGTGCACCCAAGAAAGTGGTGGTGCCAGCGTCGAAATTACAGCCCATACCGCCAGACATGTATCTAAAAGTTGGGAAGTTGCCTGTGGCAACACACACCATCAACAGTGCGGGGAAAGTGGTACCAACATCGTTTTCACAGTTCAAAAGTATAGGAAATTCAATAATCACTACTACAAGCgcaggaacaaacaaacaaacagccaAACAAGTGggaaacatatatacaatagaaGGCGATATAGATACTGTAGTCGCTAACAGAAGTGATATATCTGTCTCTCCACTCAAAAATAATGTTCTAAGTTTCAACATCAACAATTTACCTAAGGACCTCCTATCGTCGATGCTGATATCGAAAATCGAAACTATCGCACAAGGCTCTAATGAAGAGAATTCAAAGGATGACGAAGAAACAAATAATGAAAGTAATAACGAACAAAACGACATGGAGATTGATGAAGtattcGCTTTATCTGTTGTGCCGGTGACGACGGACGACGGAGATTTGGTGTTGGAAGTAGAAGGGCTTAAGAAAGAGAAAGGGAAGGACGACGACGAGTACATAGACGTGAGCATGCTGGAAAGTGTCGCCACATCCGGCGACGATAACTTCATATTGGGCAAGTTGAGGATACTGAACGAGGATGAGGTCCAAAATGTCAACGCGGACGACGATGACGATGCGCATTCTAACGACGGGTCCCAAATCGAGTTGCAAGTTTCCGGTGACGAGGAGACCGCCAACGCTATCATAATGGCGGCCCAGGAAACGGGTGGCGCTTTCATAAAAGTGGAGAGCGGCGAGATGTATCGCGTGCAGTCGGTCGAGAGCAAAAGCCAGGAGGAGAGTGATACGATCACCTCGCAGTCGGTGCAGATGGTCGCGCAGGAGGGGGACAAGTTCAGGTGTCTTCTCTGCGAGAGGCCCAGGGAGGACGGACAGAAGCAGAAGAGGTTTGTGAGCGACGCGGAGACGACGATGCGCCACCTGAAGAGCGCGCATGACGCGAGGACCTACATCTGCCAGCTGTGCGGGGTCGTCATGAGGAAACGGAGCGAGTACACGCTGCATATCGCGGAACACGCCCAGAGCGTGAAGAGCGAGTCGTCGAGCAAGTATCGCATGCACGAGTGCTCCGTGTGCCGCAAGTCGTACAGCTCGCGCACCCTGTTGACGGAGCACATGAACGTGCACAGCGGCGACAGGCCCTACGTGTGCCACCTGTGCAACAAGTCGTTCGCGAGCAAGTACACGCACCAGGCACATCTCAAGACCCACGCGGTCCGTCCGCGTCCGTTCCAGTGCAAGCAATGCGGGAAGGCGTTCCTCACGACGCAGAATTTGGCCCAACACGAGAAGACGCACTCCGGCGTCAAAGACTTCGTTTGCAACATTTGTAataAAGCTTTTAGCACCCAACACAATCTGGAGGTCCACGCCGTGGTCCACAGCGGGGAGAAGCCCTACGTGTGTTCCGTGTGCAACAAGGGCTTCGCCAGGAGGGCCGAGTGCAAGGACCACATGCGGATTCATACGGgCGAGCGTCCGTTCGAGTGCGACATATGCGGCGCGCGTTTCACGCAGAACTCGAACCTGCACTCGCACAAGCGCGCCACGCACCTCGACGACCGCCGCTACCACTGCCACCACTGCCCCAAGAAGTTCAAGAGGAAGAGATTATTGGAGTACCATATAAAGGCGACGCATACTGGCGAGCGCCCCCTGGTGTGCAAAGTGTGTGGCTCCACGTTCGTGTATCCCGAGCACTACAAGAAGCATGTTAGGATACACAGCGGGGAGAGGCCTTATGTGTGCGAGATCTGTGGCAAATCATTCAATTCTCCGGACAACCGTAACACACATCGATTTACACATAGCGACAAGAAACTTTACGAGTGTTTCACATGCGGTGCTGGTTTTATGAGGAAACAACTATTGTACATGCACATGAACACTAGTGGCCATCTGGCGGAGTCGATAGTAGTTAACCAGCCTCGCGTCACAAAAGCTATTGAAAATACGACGGCAACACACTATATAGAAGACAACGGCACTGAGTATAAGTTAACAACCGAGGCTGAATCTGCAAcgATATTTGAAAGTGCTCAAGAATTAGTATTAGAAGGCCaagATAAGAATGAGGACGATGATATACCAAAGTATTTTGTGACTACAGCTAAATCGGGTTTGAACGTTTTACAAGAAGGCGAagacgttttattgaatttgaATAATCTCGGAGAGCAGACTGGGATAATGTCGAACGATGAGAATGGTTCCACGGTGCGACTGATACAGATTAAACTCCCCGACGGCCATGACGGTTGGGTTGccatcaataattaa
Protein Sequence
MNQCCLICNAKTGATLRSSAIILFGEHTNLPSGRKLPEVVSEIIDKPVVKDNVHSDIICKKCSKMCNEYDSLQLKLYEMRNYMQEQFKTSIQGYELTYNNYTTDVKKSSKKSQQSVIKSAPKKVVVPASKLQPIPPDMYLKVGKLPVATHTINSAGKVVPTSFSQFKSIGNSIITTTSAGTNKQTAKQVGNIYTIEGDIDTVVANRSDISVSPLKNNVLSFNINNLPKDLLSSMLISKIETIAQGSNEENSKDDEETNNESNNEQNDMEIDEVFALSVVPVTTDDGDLVLEVEGLKKEKGKDDDEYIDVSMLESVATSGDDNFILGKLRILNEDEVQNVNADDDDDAHSNDGSQIELQVSGDEETANAIIMAAQETGGAFIKVESGEMYRVQSVESKSQEESDTITSQSVQMVAQEGDKFRCLLCERPREDGQKQKRFVSDAETTMRHLKSAHDARTYICQLCGVVMRKRSEYTLHIAEHAQSVKSESSSKYRMHECSVCRKSYSSRTLLTEHMNVHSGDRPYVCHLCNKSFASKYTHQAHLKTHAVRPRPFQCKQCGKAFLTTQNLAQHEKTHSGVKDFVCNICNKAFSTQHNLEVHAVVHSGEKPYVCSVCNKGFARRAECKDHMRIHTGERPFECDICGARFTQNSNLHSHKRATHLDDRRYHCHHCPKKFKRKRLLEYHIKATHTGERPLVCKVCGSTFVYPEHYKKHVRIHSGERPYVCEICGKSFNSPDNRNTHRFTHSDKKLYECFTCGAGFMRKQLLYMHMNTSGHLAESIVVNQPRVTKAIENTTATHYIEDNGTEYKLTTEAESATIFESAQELVLEGQDKNEDDDIPKYFVTTAKSGLNVLQEGEDVLLNLNNLGEQTGIMSNDENGSTVRLIQIKLPDGHDGWVAINN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00433364;
90% Identity
iTF_00433364;
80% Identity
-