Basic Information

Gene Symbol
Znf131
Assembly
GCA_012273795.1
Location
CM022542.1:18612069-18615130[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.13 8.4 7.4 0.6 2 23 135 156 135 156 0.95
2 13 0.18 12 6.9 5.7 1 23 162 185 162 185 0.94
3 13 0.0001 0.0066 17.2 0.2 2 23 211 232 210 232 0.98
4 13 1.4e-05 0.00089 19.9 0.6 1 23 238 260 238 260 0.96
5 13 3.4e-05 0.0022 18.7 0.4 1 23 268 290 268 290 0.99
6 13 5.9e-06 0.00038 21.1 1.8 1 23 296 318 296 318 0.99
7 13 7.4e-05 0.0049 17.6 0.2 1 23 324 346 324 346 0.96
8 13 7.3e-05 0.0047 17.7 4.2 1 23 352 374 352 374 0.98
9 13 4.5e-05 0.0029 18.3 3.7 1 23 380 403 380 403 0.96
10 13 0.0013 0.087 13.7 0.1 5 23 409 427 408 427 0.95
11 13 0.11 7.4 7.6 0.9 1 20 433 452 433 456 0.84
12 13 0.00057 0.038 14.8 0.1 1 23 462 487 462 487 0.97
13 13 0.094 6.2 7.9 7.4 1 21 493 513 493 516 0.95

Sequence Information

Coding Sequence
ATGAAAGACGAATGTCGCATCTGTTTAACAAATCCCGGTACAGTATCTGTTTTTGAAGTTCAAGACAATGTACAGTATAGCGCAAAGATATTACTTTGCACCAATATTGTTATTGCAGAAGACGATGGCTTTCCAGACAAATTATGTAGCGAGTGTACCAGCGAATTgaatatttcttatttgttcACTCAGAAGTGTTTAGCTTCAGATAAAAAGCTACGTGCTTTGGGCACACTGATAATAAATGATAATCAAATGAAAGAACTTAAAGAAGAGGACATAAAAAAAGAGGTTGACGACGTTTCGCCTGTTGAATTTTCTTTGGACGACTATTTAAATGAAGATTATGAAATCAAACCCCTAAAGAGAATCAAGAGAAGTAAAAAGAGTAAGTCGGAGCCAGTATGCAATGTGTGTGGTTATAAAGCAGCTTGTAAATCAGCTCTAAATAGACATGTTGTGAAGCATACAAAGGTTAAAGATTTCTCATGTTCATCATGTGATAAGCAATACTCTTGTAAGGAATCGTTACAACACCATCAAGAATTACGTCATGGCCaagtatttaagaaaaacagaAAATGGAAAAAGATTGATAAACGGTCCCAAAGACATAAAGCATACCCTATGCAGTGCACTGAATGTGGCAGACTAGTTGCGAGTAGATCTGCAATGGAGAGCCACATGAGGACACATACCGGTGAGCGCCCTTTTGAGTGCAACCAATGTGATGCTAAATTTGTTACCAAAGGCTCATTGAAGAAACACTTAGATCTACATGCAGTAGAGCGGGAGAGGAAGTATACATGCGAGATGTGCGGCAGTAGCTTTTATcgtaaaaatgaaattataacgcACATACGTATACACACTGATGAAAGACCATACAAATGCACTTTTTGTCCAAGAGCATTTAAGCAGGTGTCATCATACATTCGCCACAGACGCATCCACACTGGAGAGAAGCCATATGCATGTCCGATATGCCAGAAACGGTTTGCTGAGAAAACCCAAGTTAATAAGCACCTTGTTGTGCATAGTGATGAAAAGAAGTTCCGTTGTCACTTGTGTAATAAATGCCTTAAAAGTAAAGGGGCCTTGAAAATACACATAAACTTACATACAAATGATAAACAGCATATATGCAGTTTCTGTGGTagacaattttcttttaaaggCAACCTGAAGTTgcatattaaaagaaaacattcaGAACGTTCTGGTCAGTGTTCTGTTTGCTTTAAGACTTGGCCAGACTTGGAGGAGCATATGAGGCAGCACACAGGTGAAAAGCCATATTTGTGCAAGATCTGTGATCAAGGGTTTATGACTAAAAGGAGTTTATCATTTCATATTGGCTTCAAACATAAGAACGCTGATAAATTCAAGTGCTCCGTGGGTGAATGTACGAAATCATTTCCGAATGGAGGCTTATTGGAGTGGCATCTATTGAAACAACATTCAAACCAGCCCACATTTATCTGTACACATTGTTCCCGAGGTTTCTTCAGGGTTTGTGATCTGTCAAGGCACATGAGATGCACCCACAATGATGTATCAAGAGCACATGTCAAAAAACAAGATACTGAACAAACATAg
Protein Sequence
MKDECRICLTNPGTVSVFEVQDNVQYSAKILLCTNIVIAEDDGFPDKLCSECTSELNISYLFTQKCLASDKKLRALGTLIINDNQMKELKEEDIKKEVDDVSPVEFSLDDYLNEDYEIKPLKRIKRSKKSKSEPVCNVCGYKAACKSALNRHVVKHTKVKDFSCSSCDKQYSCKESLQHHQELRHGQVFKKNRKWKKIDKRSQRHKAYPMQCTECGRLVASRSAMESHMRTHTGERPFECNQCDAKFVTKGSLKKHLDLHAVERERKYTCEMCGSSFYRKNEIITHIRIHTDERPYKCTFCPRAFKQVSSYIRHRRIHTGEKPYACPICQKRFAEKTQVNKHLVVHSDEKKFRCHLCNKCLKSKGALKIHINLHTNDKQHICSFCGRQFSFKGNLKLHIKRKHSERSGQCSVCFKTWPDLEEHMRQHTGEKPYLCKICDQGFMTKRSLSFHIGFKHKNADKFKCSVGECTKSFPNGGLLEWHLLKQHSNQPTFICTHCSRGFFRVCDLSRHMRCTHNDVSRAHVKKQDTEQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00432475;
90% Identity
iTF_00432475;
80% Identity
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