Basic Information

Gene Symbol
-
Assembly
GCA_012273795.1
Location
CM022549.1:1489365-1517600[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00012 0.16 12.5 0.2 15 45 101 132 93 133 0.76
2 4 0.0011 1.5 9.4 0.2 7 46 175 227 173 227 0.71
3 4 0.18 2.5e+02 2.2 0.1 22 46 293 318 284 318 0.81
4 4 0.16 2.2e+02 2.4 0.0 21 46 394 418 374 418 0.86

Sequence Information

Coding Sequence
ATGGAAATGAATACTCCACACAATCAAAGCTACTGGTTCGTTGTGAGAGAAGACCAAAGTAACGTTATCTTCAGTAGCAACTTTCCTCTGCAAAATCAAAtTTCAGTGGCAGGACAAGATGCAAGATATGTTATAGACACCCACACAGTAGAAAAGCAATACATCCAAATAAATGAAGCACCTGTTATGGTACAAGAAGCAGTTCAAGAGCATTGTGAAAAAGAAACTCCCAAAAAAGATACAGATAACTTCTGGGATCgaagcaaaataaaatatcttctaGCATTATGcttgaaaaataaactaaaaaaccaAAAGGATAAGAATTTCTGGAATGAAATTTCTGCTCAGCTTGGTACTACTCCTGATGAATGTATTAAAAAGTATAGAAACTTAAGAAGAACTTACATACggcttttaaaaaagaaaaaaattggtaaAGATATCAAGTGGGTACATTACAATGTTTGCGAGGAGGTCTTCAATGAATGCAAGTCTTTGCCAGCCGCAGTACTAGAGCCTTGGGAGGACCACAAAGTCCGAAGGTTACTAAGCCTCTACATTGAAAATTCACACAGGTTTAAAAATCCAGATGGTTTGCAGAAAGATGTTTGGAAAGACATAGCTGCACAACTAGGAACCACACATTACAACTGTTATCACAAGTTCAAAAACTTGAAAAGGGCCTATTTTAATTGGCTGGAGAGAAGTCACACAACAGGAAAACCTATAAAATGGCAGTATTATCAATtttttgaaagaatttttaccAATCACCAACCTATTGTGGGTCCTTGGAACAGGACCAAAACTAAGATGCTTATAGATTCTTATCTTCAAATAGCTGATAAGTTTAAAAACCCTAAATATCAAAAGAAAGAACTTTGGAAAGAAATATCAATGATAGTCGGAGAAAGTCCAAGTGACTGTGATAAAAAATTCAGAAATTTAAAGCAAACTTATATCAGATTAAAAATGAAAGCAGATATGGGTAGATCTATAACAAAGTGGAGGTATTATCaagattttgaaattatttatggcACACAGAGGAATTACGAAACTAGAGAAGACATTGTTAATAACTGTAGGATGACAGAAGATAACTATGTTAGAAAACTGCTTGAATTTTACATAGAGAATAAAGGGAAATTTAGGGATCCGTTGGTAAAAAAGAAGAATGTATGGAAACTGCTAGCACCAAAAATTGGTCTATACCCTGAAGAGTGTGATAGGAAATTTCGCAATCTAAAACAAACCTACATAAGGTTGGCAGAGAAAAAGAGGGAAACTGGCAAAAATAGTAATTGGCCTTACTTTTCTTACTTTGAGAAAATATTTGATGAACCAACAAGTGTGTACCACAACAATCATATTAATGTAGATGACATGACCTATTCTGAAATAAAGAGGATAATTATGCAAGAGATGCAAAGTAGAAATGATAGTGATAAGTTTGAAAGCTTAGTAAGTGCAGTTGAAGAGTCTAATAATATTCAGAGAGAAAGGAATAGAATTTTACAAGCTTTGTTAgataagagataa
Protein Sequence
MEMNTPHNQSYWFVVREDQSNVIFSSNFPLQNQISVAGQDARYVIDTHTVEKQYIQINEAPVMVQEAVQEHCEKETPKKDTDNFWDRSKIKYLLALCLKNKLKNQKDKNFWNEISAQLGTTPDECIKKYRNLRRTYIRLLKKKKIGKDIKWVHYNVCEEVFNECKSLPAAVLEPWEDHKVRRLLSLYIENSHRFKNPDGLQKDVWKDIAAQLGTTHYNCYHKFKNLKRAYFNWLERSHTTGKPIKWQYYQFFERIFTNHQPIVGPWNRTKTKMLIDSYLQIADKFKNPKYQKKELWKEISMIVGESPSDCDKKFRNLKQTYIRLKMKADMGRSITKWRYYQDFEIIYGTQRNYETREDIVNNCRMTEDNYVRKLLEFYIENKGKFRDPLVKKKNVWKLLAPKIGLYPEECDRKFRNLKQTYIRLAEKKRETGKNSNWPYFSYFEKIFDEPTSVYHNNHINVDDMTYSEIKRIIMQEMQSRNDSDKFESLVSAVEESNNIQRERNRILQALLDKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00432115;
90% Identity
iTF_00432115;
80% Identity
-