Basic Information

Gene Symbol
CDC5L
Assembly
GCA_012273795.1
Location
CM022530.1:8408310-8428649[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-10 2.3e-07 31.2 2.4 18 46 2 31 1 31 0.96
2 2 4e-12 5.4e-09 36.4 0.1 1 45 37 80 37 81 0.93

Sequence Information

Coding Sequence
ATGAAATATGGAAAAAATCAATGGTCCCGTATAGCATCATTGCTGCATAGAAAATCTGCAAAACAATGCAAAGCGCGTTGGTACGAATGGTTGGATCCAAGCATAAAAAAGACGGAATGGTCTCGGGAAGAGGACGAGAAGCTTTTGCACTTGGCCAAGCTTATGCCCACTCAGTGGAGAACTATTGCTCCAATCATTGGTCGTACTGCTGCACAATGCTTAGAAAGATACGAATATTTGCTGGATCAGGCACAGAAAAAAGAGGAGGGGGAGGATATGGGTGATGATCCAAGGAAACTGAAGCCAGGAGAAATTGATCCAAATCCTGAAACTAAGCCAGCGCGGCCTGATCCCAAGGATATGGATGAAGATGAATTGGAAATGCTGTCAGAAGCTCGAGCTCGTCTTGCCAACACACAAGGCAAGAAGGCAAAGAGGAAGGCCAGAGAAAAGCAGCTTGAGGAAGCCAGAAGATTGGCTGCATTGCAAAAGAGAAGGGAGCTTAGTGCTGCAGGTATTGCAGTGCCAATCAGgCGTAAGAAGAAGCGTGGCGTCGATTATAATTCGGAGATTCCATTTGAGAAGAAACCTACCGCAGGTTTCTATGATACATCCACAGAAGTGGTTGATCCAATGGCTCCAGATTTCTCCAGACTGAGGCAGCAACATTTGGATGGTGAATTGCATTCTGAGAAAGAAGAGCGTGACCGACGTAAAGATAAACAGAAGTTGAAGCAGCGCAAGGAGAACGATGTGCCCCAGGCGATGCTGCAGGGTGACCAACCTGCAAGAAAAAGGAGCAAGCTGGTGCTGCCAGAACCTCAAGTGTCTGATCAGGAGTTGCAGCAGGTGGTGAAGGTGGGGCGCGCGTCGGAGGCGGCGCGCGAGTCCGCAGGCGGCGCGGGCGCGGCCACCGACGCGCTGCTCGCGGAGTACGCGCTCACGCCCGCGCCCGCCACCGCGCTGCGCACGCCCGCGCAGCACCAGGACAGGATTCTTATGGAAGCTCAAAATGTAATGGCCCTAACACATGTGGACACACCATTAAAGGGTGGTCTGAACACACCACTGCATCAGAGCGACTTCTCTGGGGCGTTGCCACAGTCACAGGTTGTGGCCACACCAAATACAGTACTGGCAACACCATATAGgTCATCACGTACTGAAGTATCTACACCGGGCAGCTTTAACACTCCGAGCCATGGAGCAGGACAACCAGGATTGACTACACCTGGTTTGCGCGATAAATTGAGTATCAACCCTGAAGACAGACTGGGCGGTGGTGACACACCTCAACTTGCtaatcaaatacaaaaacaaCTGAAGGCGTCGGTGCGCAGCGCCCTGTCTGCGCTGCCACAGCCGCGCAACGACTACGAGATCGTGGTGCCGGAGCAGCCGGGCGACGACGGCGCCGACGCGGCGGCGGCCGCGAGCCGCATAGAGGACCAGGCCGACGCCGACGCGAGGCTGAACAAGGAGCGCGAGGAGAAGCGGCTGGCGGAGCTGGCGCTGCGCTCGCAGGCGGTGCAGCGCGGGCTGGCGCGGCCGTGCGAGGTGAACGCGGCGGTGgtgcgcggcggcggcggcggcgcgccgCTCTCCGCGCTGCAGCAGGCCGAGGAGCTGCTCAAGGCCGAGATGGTCACCATGCTGCACTACGACTCGCTCAGGGACCCACCCACAGGAGTGGATAAGAAGCGGCAAGTGCAACTCCAAGCGTCACACCTCGCGTATCTAGAACACCACCCATACGAGGAGTTCTCCAAGGAGGAGCTGAAGGCCGCTGAGGCGGAGCTCAGGAAGGAAATGGAGGTGGTGAAGGCTGGCATGAGCCACGGGGACTTGAGTATAGATGCATACACTCAAGTCTGGGAGGAGTGTCTTGCTCAGgtGCTCTTTCTACCGGGACAAAATAGGTATACTCGTGCGAATTTAGCCAGCAAAAAGGATAGGCTTGAATCAGCTGAAAAAAGACTGGAACAAAATCGGCATCACATGGCCAAAGAAGCCAAAAAATGCTCAAAAATGGAGAAGAAACTTAGGGTCATCACagGTGGTTACCAAAGCAGGGCGGCGTCGTTGGTAAAGCAGTTCCAAGAGCTTCAGGATCAAATAGAGCAAGCGAACCTGGAACTGTCTACATTTAAATTCTTGGCTGAACAAGAGAAGGCTGCCATTCCACGTAGGATAGAGTCTCTGACAGAGGATGTCAATCGTCAAACAGACCGTGAAAAGCAACTGCAAAAGAAATACGCCGAACTTCAAGGAGAGCTAGAAGAGATCAGCAAAGGGAAGCCAGGAAAAGTTATTACTAAGGGAGGTGAATAA
Protein Sequence
MKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDMGDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPIRRKKKRGVDYNSEIPFEKKPTAGFYDTSTEVVDPMAPDFSRLRQQHLDGELHSEKEERDRRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVSDQELQQVVKVGRASEAARESAGGAGAATDALLAEYALTPAPATALRTPAQHQDRILMEAQNVMALTHVDTPLKGGLNTPLHQSDFSGALPQSQVVATPNTVLATPYRSSRTEVSTPGSFNTPSHGAGQPGLTTPGLRDKLSINPEDRLGGGDTPQLANQIQKQLKASVRSALSALPQPRNDYEIVVPEQPGDDGADAAAAASRIEDQADADARLNKEREEKRLAELALRSQAVQRGLARPCEVNAAVVRGGGGGAPLSALQQAEELLKAEMVTMLHYDSLRDPPTGVDKKRQVQLQASHLAYLEHHPYEEFSKEELKAAEAELRKEMEVVKAGMSHGDLSIDAYTQVWEECLAQVLFLPGQNRYTRANLASKKDRLESAEKRLEQNRHHMAKEAKKCSKMEKKLRVITGGYQSRAASLVKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVNRQTDREKQLQKKYAELQGELEEISKGKPGKVITKGGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00275212;
90% Identity
iTF_00012971;
80% Identity
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