Dpun010229.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- clz9
- Assembly
- GCA_012273795.1
- Location
- CM022540.1:20121448-20123179[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-08 4.3e-05 23.5 0.0 6 38 20 52 18 57 0.88 2 2 2.1 1.5e+03 -0.6 0.0 21 30 357 366 357 368 0.82
Sequence Information
- Coding Sequence
- ATGGTTAGAACATTCAAACGCAAAACGGAGAGAACTTTCATCGATGAAATTTCTGTGGCTTCTGCGATATCTGATGTGTTGAAAGGAGAATTATCAATAAGAAAAGCAGccgataaatataatttaaaacctgCAACTCTACAGCATAGaattgaaaaaaagaagaataaagaCTGCGAAGGCATGAGTTTTTCGTCTAAGTATACCTCCAAGCAAGTATTTACAACCGAACAAGAAGACCAACTAAatgcttatataataaaatgcagTAAAATGCATCATGGGCTTACATTAACTAATGTGCGGCAGCTTGCTTACGAATAcgctaaaaaattaaattgcagCTATCCACCAATTTGGAATGTCAATAAAAGTGCTGGCTTGGATTGGACATATGGTTTTcgtaagagaaataaaaatattagtttaaggAAACCCGAGAACACAAGTGTTGCCCgatcattttcatttaataagaCTGCcgttgaaaccttttttaataatttagaagatGTTCTCGCAAGATTTAAGTTTACAGCTAACCGTATTATTAATTTCGATGAAACCGGCATTACAACGGTTATGAATACTCCAAAGATATTGGCAGAAAAAACTCAACGTCAAATCGGCCAAATTGTTTCTGCAGAGAGAGGCGAGTTGGTGACATTTGGAGGAATCATTACTGGAACTGACAATAGTATTCCACCTATATATGTGTTTCCCAGGGTTCATTACAAAAGCCATTTTTTAAATGGTGCTCCTGAAGGGTCTTTGGGCTTATCGTCTAGATCTGGTTGGATAAATAGTGAATTATTTACAGAGGTCCTTAAACATATCCAAAAACACACAACTAGCACAAAGGAAAGACCGATTCTTCTAATTTGTGACAATCATGAGTCCCATATTTCAGTCGAAGCAATTAATTATTCACGTGAAAATGGAATTGTTTATTTATCGTTTCCTCCACACACATCTCACAAACTCCAACCTCTTGATGTCGGTGTTTTCAGCCCGTTTAAAGCAAAACTCAAAGTAGCCTTCAATGACTGGCACATTAATCACCCTGGGAAAGCGTTAACTATTTATGATATTCCAAATCTTTCTGAGTTGGCCTTTTTTGAATCTTTCAACGCGAAAAATATTACGAGCGCGTTTGCTAAGCCTGGAATCGTGCCATTTAATAGATTGGCATTTTCTGAAGAAGATTTTTATCCTTGTGATGTTTATAGCAACCAAGAATCCCAAAATGATCCTACAAATGATTCTAGTGCCAATCCTATTGATCCCGAATTAACAATAGAGAGCGAGCAATGTATAACACCACCTTCCACTAGAGAGCCACCAAATATCATGAATGATTTTgagttacataataaatatgccTTCAACGTCAAGAGCTTCTGA
- Protein Sequence
- MVRTFKRKTERTFIDEISVASAISDVLKGELSIRKAADKYNLKPATLQHRIEKKKNKDCEGMSFSSKYTSKQVFTTEQEDQLNAYIIKCSKMHHGLTLTNVRQLAYEYAKKLNCSYPPIWNVNKSAGLDWTYGFRKRNKNISLRKPENTSVARSFSFNKTAVETFFNNLEDVLARFKFTANRIINFDETGITTVMNTPKILAEKTQRQIGQIVSAERGELVTFGGIITGTDNSIPPIYVFPRVHYKSHFLNGAPEGSLGLSSRSGWINSELFTEVLKHIQKHTTSTKERPILLICDNHESHISVEAINYSRENGIVYLSFPPHTSHKLQPLDVGVFSPFKAKLKVAFNDWHINHPGKALTIYDIPNLSELAFFESFNAKNITSAFAKPGIVPFNRLAFSEEDFYPCDVYSNQESQNDPTNDSSANPIDPELTIESEQCITPPSTREPPNIMNDFELHNKYAFNVKSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433084;
- 90% Identity
- -
- 80% Identity
- -