Dpun012073.1
Basic Information
- Insect
- Dendrolimus punctatus
- Gene Symbol
- -
- Assembly
- GCA_012273795.1
- Location
- CM022534.1:10607360-10611673[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-12 5.9e-09 35.9 0.0 3 39 12 48 10 54 0.86
Sequence Information
- Coding Sequence
- ATGAAACCTCATGCTCGTGGAAACTGGTCTTTGGAACAATTAAAAAACGCAATGGAAGCTGTAAAAGGAGGACTTATGTCTCAACGGAAAGCATCCATAACATATGATATTCCGAGAAGAACTTTAGTCAACCACTTAAAATCAGGAAAAGTTGAAAAACAAATCGGTCGTCGTACGATTTTGACCGCGGAACTAGAAAATGACCTAGCGGAAAGAATCAAGAGACTTGCATCTATAGGCTTTCCTTTGACGCCAAAAATCATACGTCATcaagcatttattttttgtgagaAACACAACCTAGGAAATAAGTTTAATCAATCTACAAAACGTGCAGGGAAGGATTGGTTAAAACTCTTTCTTAAAAGACATCCTGACATAACAAAACGAAAAGTCCAAATTTTAAATCCAGGTAGAgcccaaaaattaaataagactATTGTAAGACAACATTTTGAcgagtacaaaaaaatatatgaagaaCTAAAAATTGGAGATTACCCACAGCGCTTGTTCAACATGGATGAAAAAGGTTGCAGACTAACTATACACAAGCAACCACTAGTTTTAGCAAAAAAAGGATCCAAAAGAGTTCATATGGTTGCACCTGAACATGCAGAAAACGTGACAGTGGCTGCTTGTGTGAATGCATTGGGTAATCCGATACCCCCAATGATAATATTTAAGGGCAAAAGGATGAAACCCGAATTTAGTGACAATTTACCTGCAGGGTCGCTTATAAAAATGTCTCCAAAAGGAAGTATGACTTCGTCATTATTCGTGGACTTCATAAATcacttaggaaaatataaacCCGAAGGTAAATGTCTCTTAGTTTTTGATGGTGCTTCATGTCACCTGgattataatattgttgatGCAGCAGATGATGagaacattgttttatactgcttACCATCTAATACAACGCATGAACTTCAGCCATTGGACAAAAGTGTAAACAAATCATTTGAACACCATTGGGACCAAGAAACATTATCATTTTTGTATCAAAACCctgaaaaaaaactaacaaaagctcgatttaattcaatttttagtAAGGTATGGTCAAAATGTATGACTCATGAAAATATAGTCAGTGGATTCAAAGCTACTGGGCTTTACCCATACAATCCAGAAGCAATACCAGATGAAGCATATGCTCCCTCTGTATTGACTGAGAGACCACCAGAACAAGAATATGTTTCCACAGGACATATATCTCCAACTCCTGGCCCTTCCAATATACATATACGACATGCAATTTATAGTCCTACAACTGATAGTTCTGATTCCAATCGGACATATATTAACCGGTGTCCTAGTTCACCATCTTTGCTCCAACAAACTGAGGCTATGCCATTAGTCCTAGAAGCTTACAGtcacagtaataaaaaaataatcgacTACAGTTCATCTGACAGAGATTCTGAAATACTATCACTTCAAGTAAAAAAACCAATCACCGTCTCCAGACCAATAATTTACAGTTCTGACTCCGATACTTTTTATGATGAAGCAATGATTTCATGTCAAAGACCTCGACTGAGTTTCGAATCTATGCTTAATAAATATCATTCCTTTGATGATGAAAACAAAAACCCAGGTTTGAAGCAACATACTCCTATCAAACAGATGAATATTTCGTGTGCTTCTGTTGACGTAATAAGCGGTAATCAAAACTGTTTGTCAAGCGACGACGATTCGGAAAATAATATTCCATTAGCTAGGTCGAAAGTCAGTTCCTCTACAAAATCTCCATTTCAACTACTAATACCTACGCCAAACTATGCTGTAGTTAAACGGAATCCAAGACGAAAAGCAATCAATTACAAAGCCTGTATAGTAACAAAGGATTTATTTACAgatatagaaaagaaaaaagatactcgtaaaaagaaaatgaaagaaaacGATTCTCAAAGAAttgataataaaagtaaaaaaccaAAGTCAGAAACTAAGAAGAAAACatcttgtaaaaataataaaagaagaagTAAAACTGTTTTCAGAAAGGAAGATACAATGCAGAAGACTGCAAAAGAAAGAAGCAATACAAGTGATGAAGGAAATGATATTGATAAATGGTATTGCTACGCATGTCATACAGAACGTTGTGAAGACATGCGACAGTGCCCATTGTGCCAAAAATGGTTTCATGAACAATGTCTGGGTTTAACCAAAGAAGATTTAGACTTTGATTGCCCAATTTGCAactag
- Protein Sequence
- MKPHARGNWSLEQLKNAMEAVKGGLMSQRKASITYDIPRRTLVNHLKSGKVEKQIGRRTILTAELENDLAERIKRLASIGFPLTPKIIRHQAFIFCEKHNLGNKFNQSTKRAGKDWLKLFLKRHPDITKRKVQILNPGRAQKLNKTIVRQHFDEYKKIYEELKIGDYPQRLFNMDEKGCRLTIHKQPLVLAKKGSKRVHMVAPEHAENVTVAACVNALGNPIPPMIIFKGKRMKPEFSDNLPAGSLIKMSPKGSMTSSLFVDFINHLGKYKPEGKCLLVFDGASCHLDYNIVDAADDENIVLYCLPSNTTHELQPLDKSVNKSFEHHWDQETLSFLYQNPEKKLTKARFNSIFSKVWSKCMTHENIVSGFKATGLYPYNPEAIPDEAYAPSVLTERPPEQEYVSTGHISPTPGPSNIHIRHAIYSPTTDSSDSNRTYINRCPSSPSLLQQTEAMPLVLEAYSHSNKKIIDYSSSDRDSEILSLQVKKPITVSRPIIYSSDSDTFYDEAMISCQRPRLSFESMLNKYHSFDDENKNPGLKQHTPIKQMNISCASVDVISGNQNCLSSDDDSENNIPLARSKVSSSTKSPFQLLIPTPNYAVVKRNPRRKAINYKACIVTKDLFTDIEKKKDTRKKKMKENDSQRIDNKSKKPKSETKKKTSCKNNKRRSKTVFRKEDTMQKTAKERSNTSDEGNDIDKWYCYACHTERCEDMRQCPLCQKWFHEQCLGLTKEDLDFDCPICN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01430677;
- 90% Identity
- iTF_00432057;
- 80% Identity
- -