Basic Information

Gene Symbol
ct
Assembly
GCA_012273795.1
Location
CM022548.1:1095395-1160984[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.7e-27 3.2e-23 81.9 0.0 3 70 222 290 220 297 0.94
2 3 3.6e-32 4.2e-28 97.5 0.0 4 77 622 696 620 698 0.96
3 3 5.2e-31 6e-27 93.8 0.0 3 75 825 898 823 902 0.95

Sequence Information

Coding Sequence
ATGTTAATACTTGATTTACCTATTCAGTCCTCACTCGGTGTTGAACAAAAATATCGCCTTGAAAGATTGATCGCTCAACTAGTAGAAGATGTAAGAAGACTGCAAGCGTCGCTTTCAGCGCTGCAAGAGGCCCACGCACAGCAGCTGCAGCGGCTGGAAGAGAGGTTGGACGAGAAGAAACAGCATATAGCAAGACTGGAAGCTAGGCTCGATAACCAACGGGACTACGATGATATCAAACGAGAAATCAACATGCTCCGTGCCCTCGACCTAGGAGGTGGTGAGAGGTCACTGGATCGCAAACCGGACCCGCTGCGCTCGCCCTCAACCGCTCCGGTGATAAGAGAGGAGAGGAGCTCAGCGGAGCGGGAACGGAGCACCGAGCGGCGCGACGCAGGTGCTGACGACTGGCCGAGCTCGCCGCCGCCACTGAACAACAACACGACGCACCACAACAACAACGGACCGACCCCCCTCCCTCTGCCGCCGCCGAGCCCCTTTCGCTTCGAGGAGCACAGGCCGTACCGCTTCGCCGAGGACATGGGGCCACTGCCACCAGGAGCCTTAGTCGGCAGGCTCGGAGACTCGCTGATCCCCAAAGGTGACCCGATGGAAGCGAGATTACAAGAGATGCTCCGTTACAACATGGACAAATATGCAAACACGAATTTGGATACGTTGCATATCAGCCGGAGAGTGAGGGAACTGCTCTCCGTCCACAATATCGGTCAAAGGCTGTTCGCGAAATACGTTCTTGGGCTGTCGCAAGGGACTGTCTCCGAGTTGCTATCGAAACCCAAACCATGGGACAAGCTGACGGAGAAGGGCAGGGATTCGTATAGGAAGATGCACGCGTGGGCTTGCGACGAAGCCGCTGTCATGCTACTGAAGTCACTGATCCCAAAGAAAGTGGGCACAAAAGACGGCACAATAGGGCCTGGATTCGGCAGGCCGGACGGCGAGGGTGACGACCGTCTAGCCCACATGCTGAACGAGGCCCATATGATGAAGACACCAACAGGACAGACCAACAACGACGATTCGAGAAGCAACGAAGACTCCAGCTCACCGAGAACGCAGTGCCAGTCACCGTTTTCAAAGGACTCGAGTCAAAACAGAAGGCTAAAGAAGTATGAGAACGACGACATTCCTCAAGAGAAGGTGGTCCGTATATACCAAGAGGAGCTTGCCAAAATCATGACCAGGAGAGTAGAAGATATGCGTCACAGTCGCGATGGCTTTCCTGgCAATTTCCCTCCTTTTTTCAGTGGAGGCATGCCCCCGCACATGGAGAGGCCGCCAGAAGACATCCGGATGGCACTCGAAGCATACCATCGAGAGCTCGCCAAGATTCAACCCGGAGGCAACATTCCCAACATACACAACCTGCCAGCGATGCCccccttcccgaaccttctagcCTTACAACAGCAGGCGATGCATCAGGCCCAGAACCAACATATGAATGGTTCTGGGGCAATTCAGGACCTTTCCCTTCCAAAAGACAAGAACGCCAAATTAAATGGAATGACTGATAGCGATAAGGATAGAAGTATGGACGCTGAGGAGGCAATAAGACACGCTGGTAGTGCATTCTCATTAGTCAGGCCGAAGTTAGAGCCAGGCCAGCAATCGACAGGGTCATCAGCTTCGAGTCCCTTAGGGAATGCGATCTTACCTCCAGCAATCACTCCAAATGAAGACTTCAGCAGTTCGGCCGCAGCCAGTCCTCTACAAAGGATGGCGTCGATTACAAACAGCTTAATATCACAGCCATCGAATCCACCACATCATCCACAGCCCCAAAGATCAATGAAAGCGGTGTTACCACCAATCACTCAACAACAGTTCGACTTGTTCAATAACTTGAACACTGAAGACATTGTGAGGAGGGTGAAAGAAGCTTTAAGCCAGTATTCGATAAGTCAGAGGCTGTTTGGAGAATCCGTCCTGGGGCTATCGCAGGGGTCTGTGAGTGACTTGTTAGCGAGACCGAAGCCCTGGCACATGTTAACGCAGAAGGGTAGAGAGCCCTTCATACGGATGAAGATGTTCTTGGAGGACGACAATGCTGTACATAAACTAGTTGCATCGCAATACAAAATCGCGCCGGAGAAACTGATGAGAACGGGAAACTATAGCGGAGCACCTCCATGTCCGCCGAATATGACGAAACCAATGCCGCCAACGCAAAAAATGATCTCCGACGCGACTTCTCTACTCAGCAAGATGCAGCACGAACAACTGTTGGGCCCCGGCCACTTGGCCCATCTGGGTCAACCGACACCGCTGCTTCTAACACCTCCAGGATTCCCGCCTCATCACGCGGTAACGTTACCGCCCCAGCACAACGATAATAacaacaaagaaagaaaacctCCACCTCCACCACAGCCACATCATCAACCTCCAGTTATGAGAAATCTGCACCAACACATATCGCCTAGCGTCTATGAGATGGCAGCCTTAACCCAAGACTTAGATACTCAAACGATCACAACGAAAATTAAGGAAGCACTCTTAGCTAATAATATAGGGCAGAAAATCTTTGGCGAAGCTGTATTAGGATTATCTCAAGGCTCAGTTAGCGAGTTGTTATCTAAACCAAAACCTTGGCATATGCTAAGCATCAAAGGCCGAGAACCGTTCATCAGAATGCAGTTGTGGCTGAGCGACGCTCACAACATTGATCGTCTTCAGGCGTTAAAAAATGAAAGACGAGAAGCGAACAAAAGACGAAGGTCGAGTGGACCAGGTCAAGACAATTCTTCTGACACGTCATCGAATGACACGTCGGAATTCTACCACTCTAGCTCACCTGGACCAACTTCGGGTGCGCCTTGCGCAAAAAAACAGCGGGTTCTCTTCTCTGAAGAACAGAAAGAGGCTTTGAGGCTAGCCTTTGCATTAGACCCTTACCCTAATATGCCAACGATAGAATTTTTAGCGGCAGAATTAGGGCTATCAACGCGGACCATAACGAACTGGTTCCACAATCATCGAATGAGGCTAAAACAACAGGCGCCTCATGGTCTTCCAGCAGAACCGCCGGCGAGAGATCAATCTTCGGCACCTTTCGATCCTGTTCAATTCCGTTTACTTCTTAACCAGAGATTACTCGATCTGCAAAAGGAGAGAATGGGTTTGGCAGGAGTACCGCTGCCGTACCCTCCATACTTCGCCGCGAATAGTAATCTAGCAGCTTTAATCGGCCGAGGTCTATTACCTCCCGATGATCAAGTGAAAGACAGCAGCGGAGGACTAGACTTGTCGATGCCGTTGAAGCGAGAGCCCGACGGCGATGACTTCGAGGACGACGACGTAGAGAGTAACCTCGGTTCCGAGGATTCCATGGATGAAGAGTCAAAGACTGAGCCGAAAGCGGCCTCGACGCCAGCGGGCAGGTCGAGTAGACGTAAGCCCGCCGCTCCGCAGTGGGTGAACCCCGACTGGCAGGATGAAAAGCCCCGAAATCCCGACGAGGTGATAATTAACGGTGTGTGTGTGATGAGGAGCGACGATTACAGGAGAGAAGCGGAAGAGACTGTGAGGGTGGAGCCTTCGCCGGTGCCTCGGGACGTGTCCCCCCCTCCGCGCACGCCGCACACCCCCCACACGCCGCGGCCGCCGCACACGCCCGATGACGTCATTCCAGAAGACAAAATCAAATCGGAGACGGAAGACGACCGGTGGGAGTATTAG
Protein Sequence
MLILDLPIQSSLGVEQKYRLERLIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDNQRDYDDIKREINMLRALDLGGGERSLDRKPDPLRSPSTAPVIREERSSAERERSTERRDAGADDWPSSPPPLNNNTTHHNNNGPTPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAVMLLKSLIPKKVGTKDGTIGPGFGRPDGEGDDRLAHMLNEAHMMKTPTGQTNNDDSRSNEDSSSPRTQCQSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSRDGFPGNFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNIHNLPAMPPFPNLLALQQQAMHQAQNQHMNGSGAIQDLSLPKDKNAKLNGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFSSSAAASPLQRMASITNSLISQPSNPPHHPQPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMTKPMPPTQKMISDATSLLSKMQHEQLLGPGHLAHLGQPTPLLLTPPGFPPHHAVTLPPQHNDNNNKERKPPPPPQPHHQPPVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLDLQKERMGLAGVPLPYPPYFAANSNLAALIGRGLLPPDDQVKDSSGGLDLSMPLKREPDGDDFEDDDVESNLGSEDSMDEESKTEPKAASTPAGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDYRREAEETVRVEPSPVPRDVSPPPRTPHTPHTPRPPHTPDDVIPEDKIKSETEDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01443621;
80% Identity
iTF_00433035;