Basic Information

Gene Symbol
osa
Assembly
GCA_012273795.1
Location
CM022547.1:14710858-14759436[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.1e-26 1.2e-22 80.4 0.0 2 89 286 370 285 370 0.94

Sequence Information

Coding Sequence
ATGCCTCATAAATTGTTTCAGGATCTGACCGGACAAAACAGCAATGACTCTGGCGGCAGCGGAGGCGCAGGGCGCGCTACCACGCCGCACCTGAGGCCTACGCCCAGCCCAACTGGCTCCACTGGCTCACGCTCAATGTCACCAGCTGTCGGTGCTCAAAACGTAACGATGCCGCCGCGAACGTCGTCGTCGCTGCCGGATGGCAGCGGTCCGACCGCGCGGCCTGGGGCGGGCGGTGCCGCTCCCGGGCCCGCACCTAGCGCCGTACCTCCGCCCGGAGCCATGGTGGCGCAGCCCTATGTCCACCACCCCGGGTATAAGTCACCGCACTACCCGCCACCGCAACCGCCCTACGGCTACCCACCACGGAATCACCATCCGTACCCGTATGGGTACCGTCCGCCGCCCCCTCCACAACACTATCCGCCGATGAAGCAGCAGCAGGGTCGGCACATGGGCCCGCCCGGGGGTGGCGGGGCGCCCGGCGGCGAGGGCGCCATGCCGCCGCCGACGGCGCCCGGCGAGGCGCACGACAACGGGCCCGCGGCGCCCGCCACGGCACTCGTCACCACCGGCCCCGACGGGGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGTAACGCATCAGCAGCGTCGGGCGAGGAGTGCGGCTCGGGCAGCGGGTCCGGCAAGGGCTCTCGGAAGGAGTTCGGCGCGGGGAGCGCGGCGCCGTCGCCTTCGCCGGGCGCCGGCTCCCACTCCTCGCTTCACGACGACTACGACGCGTCGCCGTCGTCGTGGCCGCGCCCGCCCTCTAGTCCTAAGTCGGACTCGCTGGGCAAGTTGTACGAGATGGACGACGCGCCGGAGAGGCGCGGCTGGGTCGAGAGGCTGCTGGCGTTCATGGAGGAGCGGCGGACGCCGATCGCCGCCTGCCCGACGATATCGAAGCAACCGCTCGATTTGTATAGACTCTATTTGTTGGTGCGCGACCGCGGCGGATTCGTTGAGGTTACGAAGAACAAGACTTGGAAGGATATCGCGGGCTTATTAGGGATCGGTGCGTCGTCGTCCGCTGCGTATACGCTCCGTAAACACTATACGAAGAATCTGTTAGCTTACGAATGCCATTTTGACAGGGGCGGGATTGATCCCCAACCGATTATAAATCAAGTTGAAGCCTCCACTAAGAAGAAGGGTGGGAAGTCGAATAGTACGTCAAGTCCAGGGTCATCGAATTCCAAGAGTTCAGCGCTGGCGGCGGTGGCGGCGGCGCGGCGCCCATGGACGGGTATCCCGGCCAATACGCCGGGTACCCGCCGCAGCCCAATCACAACCAAGGCGGGGGTCCTGGCGGCGACAATCTCGCCGCCTCGAATCCGTTCGACGAGCCACCCGGGCCTAGGAGACCGCCAGgTTACCAGCAAGGATACGGGTACGAATATGGATCTCCTTACCAACCTAATAGGCCTGTTTATCCCCCTTATGGACCTGACGGCGACAGAGGTTACAGAGCGGGCCCGGGTCCCGGGCCGGGGCCGGGCGGCGAGTACCAGTACGGCGGGTACGGCGCGGGGGGCGGGGGCGCGTACCGCGGGGCGCCGCGGGCACCCCGCCCCCGGCGCAGCCCTACCCCGACTACTACCGCCCGCCGCACCCGCAGCCCCACCAGCCGCACCCGCCCCACCCGCATCCGCACCCGCAGCAGCATCCGCAGCAACATCCGCAGCAGCACCCCCAACATCCGCCCATGTCGCCGCAGCAACCGCCGCACGAGTACGGCGGCGGCAAGCCGGTGGGTCCGGCGGCGGCGGGGGTCGCGAACGCGGTCGCCGGGGCGCCGCGGCGGCACCCCGACTTCGCGAAGGGCGAGGGCGGGTACGGCGCGGGCGCCGCGGCGGGCGTCGCGGTCGCGGCGGGCGCGGCGCCCGCGCGGTTCGGCGGCGCGTGGGGCGGCTCGTTCGCGCGCGCGCCGCAGCCCCCCTCGCCGGCGGCGCCGTGGCGCCCGCCGCCCGGCGCGCCGCAACCGCCGCCCAACTGGCCCCACCAGCCCTACCAGCAACAGTCAAGCGGTGGACCCACGTGGGGAGGGGCGCCCAGGCCTCCCGCGCAAGATGCCTATCCCTCTGTACCTACGCAATCGACG
Protein Sequence
MPHKLFQDLTGQNSNDSGGSGGAGRATTPHLRPTPSPTGSTGSRSMSPAVGAQNVTMPPRTSSSLPDGSGPTARPGAGGAAPGPAPSAVPPPGAMVAQPYVHHPGYKSPHYPPPQPPYGYPPRNHHPYPYGYRPPPPPQHYPPMKQQQGRHMGPPGGGGAPGGEGAMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEECGSGSGSGKGSRKEFGAGSAAPSPSPGAGSHSSLHDDYDASPSSWPRPPSSPKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNSTSSPGSSNSKSSALAAVAAARRPWTGIPANTPGTRRSPITTKAGVLAATISPPRIRSTSHPGLGDRQVTSKDTGTNMDLLTNLIGLFIPLMDLTATEVTERARVPGRGRAASTSTAGTARGAGARTAGRRGHPAPGAALPRLLPPAAPAAPPAAPAPPASAPAAASAATSAAAPPTSAHVAAATAARVRRRQAGGSGGGGGRERGRRGAAAAPRLREGRGRVRRGRRGGRRGRGGRGARAVRRRVGRLVRARAAAPLAGGAVAPAARRAATAAQLAPPALPATVKRWTHVGRGAQASRARCLSLCTYAID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-