Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457130.1:1200702-1222462[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.056 5.3 8.6 5.7 1 23 346 369 346 369 0.96

2 7 9.2e-05 0.0087 17.4 1.4 1 23 537 559 537 559 0.98

3 7 1.3e-05 0.0012 20.1 0.2 2 23 565 586 564 586 0.97

4 7 6.6e-06 0.00062 21.0 0.7 1 23 592 615 592 615 0.96

5 7 1e-06 9.6e-05 23.6 1.7 1 23 621 643 621 643 0.99

6 7 1.2e-05 0.0011 20.2 3.2 1 23 649 671 649 671 0.99

7 7 3.8e-07 3.6e-05 24.9 0.6 1 23 677 699 677 699 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.056	5.3	8.6	5.7	1	23	346	369	346	369	0.96
2	7	9.2e-05	0.0087	17.4	1.4	1	23	537	559	537	559	0.98
3	7	1.3e-05	0.0012	20.1	0.2	2	23	565	586	564	586	0.97
4	7	6.6e-06	0.00062	21.0	0.7	1	23	592	615	592	615	0.96
5	7	1e-06	9.6e-05	23.6	1.7	1	23	621	643	621	643	0.99
6	7	1.2e-05	0.0011	20.2	3.2	1	23	649	671	649	671	0.99
7	7	3.8e-07	3.6e-05	24.9	0.6	1	23	677	699	677	699	0.97

Sequence Information

Coding Sequence: ATGATCGATGGAATAAAATTACATgtGCAAGTGTCAGTAGGTGAGCAAGTGGCGGAAGGTCCATGGAGTGAGGAAATCTTGGATACGGATGGCAGGATAGCAGCCATAGTAGCACAATTATCGCAACATTCCAGATCACATCATCCGCCTGTACATCATAAGGTACCAACTGTGAGAACAGATGTCGACACATCAGTAATCCTGGATGGTTCTATGAGGTTTCTAAATGGACAAGGTTTGGAGCACCAATCTGAGACCATCGTCGTCCATCAGTTACCAGCGCTGCCGCCACTCCAAGACATGAAACGGTGTCAAGATACGAATTGGTTTCATAACAAGAGCAAGATCACACTTAAGGATAACAACGATATTCTACATGAAGATGAGGCTGTGTTAGATTTGGACCCCGGAGCGTCGCCAGTACACAACAAGCAGCAGAGCAAGAAAAGTCTACCCCACAAAAAGAGGATATCGAAGAAACTGAAGAGAAGCAACGGGAGTAGCACTCCGCAACAGGACATAGTTGTGATAAATTGCACCGATCAAGTTCAACAAGAGGAGATATTGCCGGATAACTTTGTCACCGGGGTGCAGCACGAAGACCATCTGCCCCAAGACACGCACCACATCACGCATGAGgtcAGAGCAATATTGATATGTCAAATTTGTGGTGAATTCTATGGGGAGGACCAGTTGAAGTTTTACCATCATTTGAAGCAACATTACGAGCCTCATGCAACTATTATAATTGAGAACCCAGTACCTGATTTAGGCATAGATAAGATGACAAATACTTGTATAGTGGACAACGTTCAAACACTCCCCGATTCGATCGTGGAGTTATCCCTAGAGAACACGGTACCAAAGACAGTGTACCAAAACATAGACAAACACATTCTGTACACGTCGAGCGATAAGACGTTGAATTACACGAGCAATAAGGTGCAATATTCAATGGCGAGCATGGACAAGGAGGTGCCCACGCCCGAGACAGAGAAGTCCGATATATACGACTCGTTGGACAAATTGGAGTTCTACAGCTGTCTGAAGTGCAACAAGCAGTTCAGGAAGCAGAAGCATTGCGAGGCTCACATAAAGGAGGTGCACAGTAATCCGAAgTTGGAAGACATGGGTGAGTTCAGTGAACCGGAAGACCTGATGGAGGGAATACACGTGTCCGTGGAGGAGGGTGGGGAGCAATACGAGCAGAGCATCCTGCCACACCTGACGGTGGAGAACGGGCAGGTCCATCAGGAGCATGTCAGACAATGGTACTCCCGCAACGGCAGTGCGAGTGGGTCGAACGGGCCGCTGGTCCCCTGCGGGTCCGAGGGGGCCTACTGCCCCGTCTGCCCCGCGCCCCCGGCGGGCCCGCCCCCCGCGGAGCCCCCCGCCGAGCCCCCCGCCGGCCCCCCGAGGGAGCAACCACACTCGCCGCACCAGTTCAAAGTGTTCAAAGAGGAAGTGCTGCAGAGGATATTTGACACGGACGTGACCAACGAACAGATGATGAGTGAGCACATAATCCCGGACACGGGCCCGTTGCCGGAGGAGAGCAAACCGCCCGAACCGGAGAAGAGCAAACCGCCCGAACCGGAGAAGAAGAGGTTCGAGTGCGTCAGATGTGGCAGAGTGTTTGTGCACAGAAACAGTCTGTTGTACCACATGCTGTCGCATAACGGGAAGACGCAGGAGTGCAAGGAGTGCGGGAAGGTCTTCTACACCGTCGGTGCTTTGAAGATACATAAGCGAGTTCACAACGGCGATCGGCCGTACAAGTGTGAAATATGCGAGAGGGAGTTCAGACAATGGAGCGACCTGAAGTACCACAAGATCTCCCTGCACTCCCAGGAGAAACTCTTCAAATGCGATTTCTGCGATAAAGAGTTTGCAAGGAAGTACTCGTTGAACGTTCACCGGAGGATCCACACCGGAGAGAGGAACTACAAATGTGACTATTGCAACAAGAGTTTCAGGGCTTCCTCGTACAGGCTCAGCCACATGAGGACGCACACTGGTGACAGACCCCACTCGTGCCAAATATGCGGCAAAGCTTTCCGCGTTTCGGGCGATCTACGCCGTCATATGTTGATTCACGATAAAGTCAGAAACAAACCGCCAGACGATATTAAAACGAAACCAGAgttcaaacaaaaaattgaaactcCAGAAAAGCCAAAGGAACAGATGTCTCCGAAAACTCTGAAGAAAATTGCAGTCGCTTCCACGTCTAAGTTACCGAACATACTGAAGGCTGAGAAGAAAACTAAACCGAACAAAAAGGGACTGAAGAAGGGTGCACCGAATGTTACAGTCAGCCAAATGGAAGGCTTCAAAATGAACGATTATAATGAAGTGTACGGAAAATATAAAGAATACGATACGGGTGTAAAGAACGAGATGAACTGCAAAGAACAAAACGAGAGAGATTTCACAATATTGAAACCGATCTTTAGGAATAGCGAAATAGATATATCAGAGAGGATAGTTTTAAGTAAAACAACGGAGAACACGGACGGGAAACTGCAAGTCTTCACTCAAATAGCGAAGAAGGATTATAATGGCAGTATATTGAACAGTCAAGTATCTCTAGGTGATATCAGGCATTTGGAAAGGGAAGTTGCGAGAGAAGTGAGAAGTGATATCCACGGAGAGACGATGGAGAGTGGATTCTTGGAAAGATTGACTGCGTTGTACAATATACCGGCTGTATGA
Protein Sequence: MIDGIKLHVQVSVGEQVAEGPWSEEILDTDGRIAAIVAQLSQHSRSHHPPVHHKVPTVRTDVDTSVILDGSMRFLNGQGLEHQSETIVVHQLPALPPLQDMKRCQDTNWFHNKSKITLKDNNDILHEDEAVLDLDPGASPVHNKQQSKKSLPHKKRISKKLKRSNGSSTPQQDIVVINCTDQVQQEEILPDNFVTGVQHEDHLPQDTHHITHEVRAILICQICGEFYGEDQLKFYHHLKQHYEPHATIIIENPVPDLGIDKMTNTCIVDNVQTLPDSIVELSLENTVPKTVYQNIDKHILYTSSDKTLNYTSNKVQYSMASMDKEVPTPETEKSDIYDSLDKLEFYSCLKCNKQFRKQKHCEAHIKEVHSNPKLEDMGEFSEPEDLMEGIHVSVEEGGEQYEQSILPHLTVENGQVHQEHVRQWYSRNGSASGSNGPLVPCGSEGAYCPVCPAPPAGPPPAEPPAEPPAGPPREQPHSPHQFKVFKEEVLQRIFDTDVTNEQMMSEHIIPDTGPLPEESKPPEPEKSKPPEPEKKRFECVRCGRVFVHRNSLLYHMLSHNGKTQECKECGKVFYTVGALKIHKRVHNGDRPYKCEICEREFRQWSDLKYHKISLHSQEKLFKCDFCDKEFARKYSLNVHRRIHTGERNYKCDYCNKSFRASSYRLSHMRTHTGDRPHSCQICGKAFRVSGDLRRHMLIHDKVRNKPPDDIKTKPEFKQKIETPEKPKEQMSPKTLKKIAVASTSKLPNILKAEKKTKPNKKGLKKGAPNVTVSQMEGFKMNDYNEVYGKYKEYDTGVKNEMNCKEQNERDFTILKPIFRNSEIDISERIVLSKTTENTDGKLQVFTQIAKKDYNGSILNSQVSLGDIRHLEREVAREVRSDIHGETMESGFLERLTALYNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433427;
90% Identity: iTF_00433427;
80% Identity: -