Dpin029990.1
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- ZFY
- Assembly
- GCA_949752895.1
- Location
- OX457151.1:6010661-6028122[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 6.9e-05 0.0066 17.8 2.0 3 23 105 125 103 125 0.97 2 15 1.8e-05 0.0017 19.6 3.1 3 23 131 152 129 152 0.92 3 15 0.67 63 5.2 0.5 3 22 162 181 161 185 0.91 4 15 0.0025 0.24 12.9 0.2 2 23 199 221 198 221 0.94 5 15 8.8 8.4e+02 1.7 7.1 1 23 227 250 227 250 0.94 6 15 0.00014 0.013 16.8 0.2 3 23 261 281 260 281 0.98 7 15 0.004 0.38 12.2 1.7 1 20 287 306 287 308 0.94 8 15 0.00033 0.032 15.6 3.9 2 23 519 540 518 541 0.94 9 15 0.007 0.67 11.5 1.1 2 23 549 571 548 571 0.94 10 15 0.015 1.4 10.5 1.7 1 23 575 598 575 598 0.97 11 15 0.013 1.3 10.6 0.9 1 23 602 625 602 625 0.96 12 15 0.00076 0.072 14.5 3.1 3 23 630 651 628 651 0.95 13 15 0.034 3.2 9.3 1.1 3 23 656 677 655 677 0.94 14 15 0.083 7.8 8.1 0.3 3 20 692 709 691 711 0.92 15 15 0.00017 0.016 16.6 2.1 3 23 725 746 724 746 0.95
Sequence Information
- Coding Sequence
- ATGGTCATCAAACAAGAAAACACAATTCCTAATCAAGTATCAGATGATGATATTCCACTCAgcaatgtaaaatataatgatttaaaaaagcTTGATACTGTTATATATTatgataaagaaaataataaaaatgttaaagaaGAGATCGAAACTTATGATGATTCACTCTCTAGTGCCAAATTTGATGAAATGTTACCAAATAATGATGCAATTTTGAAAGATGATGAAATGAAAACAGAAGTCAAGAaccaaaaatattcaaagaataatagAAACGTTAAAGGCCCTTCAAAGTACCACAAAGTGGTAATATGTGATCACTGTGGAAAGAAATACAAATCCAAGCGAGTTCTTGAGAAACATGTAAGAAATCACTCGACAACCCATCTGTGTACGATATGCgacaaaacatttaaaactaaAGCGACTCTACGCAAACATACGGACATAAAACACGTGACCGTGAACACAGAGGACGCTTATTGCGTACAATGTGATATACAATTCAATAATGTCAAAGTATACAAACGACATGTCAACACAAGTATCAAACATGCCAAGGAAAGGAACGAAAAAATGTCAACAACAAAGGTACCTTGTCCAGAATGCGGTAATATTTATTCTAGGAAGGCTTATATGATGAACCATTATAACCATGTACATAGAAATAACTCTAAATATCATTGTGTTCACTGTGATAGGaaattccTCAATAGAACAAAATATTTGGACCACACGAAATATTATCACGAAGGTAAAAAGAAGGAGAAGAACAAATTGTGTTATATTTGCGGACGAGGATTCGCTATCAAAAGAACTCTAATAAACCATATTCGAACACACAGTGGCGAAAGACCGTACCAATGTCAGCATTGCGGTAATCGTTTCGTTCAGAAACATGCTATGCTCACACATGTGACTAAGGATCTACTGCTCTGTTGGGAATGCACCGCCAGGCTGAATTCACTTAGAACATTCCAGAACAGAATTAAGAATGCACAACATGTATTGCAGCAATATATGTATCAACTGaatCAAACTCCACAGTCCTTATCAGCTCTCAAAGTAGAAATAACTGATCATTATGATCATTCAACGCAAAATGATTTAACCAATATCATAATACTCTCATACAATACATGTGATACTGAAATTAAATCAGAAAACCAAGATAAGAAGGATGTATATGATGATATTGATAATGATATAAATGATTATGATAATGAAATAgttgataataatataagtgaAATAGATAAGCAAATAGATGATACTCAAAATCTATCATTTGAGAATGAAAATCAATCAGATTATCAACCAATTAAATTGCATAggaaacaaagaaaaaagaagaaagagaaGAGTGCTGTCAGAAAGATAAGAAGTCAAGTTTCAATAAGAAAATATGAGAAGTATGCATTGGTTGATAAGAAATTGAATATAGAGGGTGATGATTTGAAGAAGTGGTATACAAAGATGAAGTTGAGTGAGAAAGAAATGGAAGATGTGTTAAATAAGGATAGAGTAAGTAAAGCGACATGGAGATTTGAGAAGAAATGCAAAGACTGTCATATTGTGTACAGAAGGTCAATTGATTTGAAGAGGCATATTGCATTTCATCATTTGAAGGCCGCTGACTCTTTGAGGTGCGCCCAATGTCGAGTGAAATGCGCTTCGCAGTCGGAGCTGAAGCGCCACTGGTTGTCGGCGCACACGTGCGTCTACAAGTGCGTGTCGTGTGACGTCACGTGCCGAGACTCCAACGAGATGAGCCGACACGTGAATAAGGAACACACGGCCGTGTATAAATGCGTCGAGTGCGGTGTCACAAGGAGcaCATTGCGTAATTTTAGTGAACACTACAAAGAATCTCATGAAAATGTTATATGTGATTATTGCAGCAGAAGTTTTCATAAGAAAACTACGTTAATCAAACATATAAAGTATAAACACACAGCTCCGATCTGCGACATATGCAACCGTATGCTCCAGAACCACAAAGCCCTAACGAAGCACAGGTACATCGTCCACGCCATAACAGTGCGAGGGCCACAGCCACGTGACCTGGCCTACTGCGTGGAGTGCGATAAGCAGTTTCCCACGATATACAAGTACAAGTACCACTTGTCTCAATCACCCAGACATCAAAACAAgaataaatttatGAAAGCGTGCCCTGAATGCGGTAAAGTGTTCTCGCGTACCGCCTGCATGAACCACCATTACAAACTGGTACACCTGAAGGACACCAGGTATAAGTGCGACATTTGCAATAAGTGTTGGTGGTTTGAAATTATGACACCGAATGAACGAGCATCGATGTGCTGCAAACGCGCGCTCCGCGAGCCTCCGCGAGCGGTTTCTCAGACCACGCTATGTTAG
- Protein Sequence
- MVIKQENTIPNQVSDDDIPLSNVKYNDLKKLDTVIYYDKENNKNVKEEIETYDDSLSSAKFDEMLPNNDAILKDDEMKTEVKNQKYSKNNRNVKGPSKYHKVVICDHCGKKYKSKRVLEKHVRNHSTTHLCTICDKTFKTKATLRKHTDIKHVTVNTEDAYCVQCDIQFNNVKVYKRHVNTSIKHAKERNEKMSTTKVPCPECGNIYSRKAYMMNHYNHVHRNNSKYHCVHCDRKFLNRTKYLDHTKYYHEGKKKEKNKLCYICGRGFAIKRTLINHIRTHSGERPYQCQHCGNRFVQKHAMLTHVTKDLLLCWECTARLNSLRTFQNRIKNAQHVLQQYMYQLNQTPQSLSALKVEITDHYDHSTQNDLTNIIILSYNTCDTEIKSENQDKKDVYDDIDNDINDYDNEIVDNNISEIDKQIDDTQNLSFENENQSDYQPIKLHRKQRKKKKEKSAVRKIRSQVSIRKYEKYALVDKKLNIEGDDLKKWYTKMKLSEKEMEDVLNKDRVSKATWRFEKKCKDCHIVYRRSIDLKRHIAFHHLKAADSLRCAQCRVKCASQSELKRHWLSAHTCVYKCVSCDVTCRDSNEMSRHVNKEHTAVYKCVECGVTRSTLRNFSEHYKESHENVICDYCSRSFHKKTTLIKHIKYKHTAPICDICNRMLQNHKALTKHRYIVHAITVRGPQPRDLAYCVECDKQFPTIYKYKYHLSQSPRHQNKNKFMKACPECGKVFSRTACMNHHYKLVHLKDTRYKCDICNKCWWFEIMTPNERASMCCKRALREPPRAVSQTTLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -