Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457138.1:17584785-17598390[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.1 8.6e+02 1.7 0.2 3 23 115 135 114 135 0.93

2 18 0.012 1.1 10.8 0.1 2 23 139 161 138 161 0.95

3 18 0.24 23 6.6 3.2 3 23 166 187 164 187 0.92

4 18 0.04 3.7 9.1 0.0 1 21 419 439 419 440 0.94

5 18 0.14 13 7.4 0.8 3 23 451 471 450 471 0.95

6 18 2 1.9e+02 3.8 0.7 1 23 487 510 487 510 0.86

7 18 0.041 3.8 9.1 1.2 3 23 521 542 519 542 0.91

8 18 2.3 2.2e+02 3.5 0.9 2 23 619 641 619 641 0.86

9 18 9.7 9.2e+02 1.6 0.3 1 23 646 669 646 669 0.87

10 18 3.3e-05 0.0031 18.8 1.6 1 23 675 697 675 697 0.97

11 18 9.2e-06 0.00087 20.5 0.2 1 23 704 726 704 726 0.97

12 18 9.7e-05 0.0091 17.3 2.3 1 23 731 753 731 753 0.96

13 18 0.00064 0.061 14.7 2.6 1 23 759 781 759 781 0.99

14 18 2.9e-06 0.00027 22.1 2.5 1 23 787 809 787 809 0.98

15 18 9.1e-05 0.0086 17.4 2.3 2 23 816 837 816 837 0.98

16 18 0.0027 0.25 12.8 2.4 2 23 845 867 844 867 0.97

17 18 0.011 1.1 10.8 0.1 1 23 872 894 872 894 0.98

18 18 0.0002 0.019 16.3 1.7 1 23 900 923 900 923 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.1	8.6e+02	1.7	0.2	3	23	115	135	114	135	0.93
2	18	0.012	1.1	10.8	0.1	2	23	139	161	138	161	0.95
3	18	0.24	23	6.6	3.2	3	23	166	187	164	187	0.92
4	18	0.04	3.7	9.1	0.0	1	21	419	439	419	440	0.94
5	18	0.14	13	7.4	0.8	3	23	451	471	450	471	0.95
6	18	2	1.9e+02	3.8	0.7	1	23	487	510	487	510	0.86
7	18	0.041	3.8	9.1	1.2	3	23	521	542	519	542	0.91
8	18	2.3	2.2e+02	3.5	0.9	2	23	619	641	619	641	0.86
9	18	9.7	9.2e+02	1.6	0.3	1	23	646	669	646	669	0.87
10	18	3.3e-05	0.0031	18.8	1.6	1	23	675	697	675	697	0.97
11	18	9.2e-06	0.00087	20.5	0.2	1	23	704	726	704	726	0.97
12	18	9.7e-05	0.0091	17.3	2.3	1	23	731	753	731	753	0.96
13	18	0.00064	0.061	14.7	2.6	1	23	759	781	759	781	0.99
14	18	2.9e-06	0.00027	22.1	2.5	1	23	787	809	787	809	0.98
15	18	9.1e-05	0.0086	17.4	2.3	2	23	816	837	816	837	0.98
16	18	0.0027	0.25	12.8	2.4	2	23	845	867	844	867	0.97
17	18	0.011	1.1	10.8	0.1	1	23	872	894	872	894	0.98
18	18	0.0002	0.019	16.3	1.7	1	23	900	923	900	923	0.98

Sequence Information

Coding Sequence: ATGAGTGCAGAAGAATCAGACGATGAGCCCTTGTCTGTTTTAGCGGCCACGAAAAAGCTTAACCCTGAGTTGTTCAATATTCCTTCCTTAGAGGTGACTTTAGTccctaaaaagaaaaagaaaaagaagaccATTCAAAGTAAAGAACCCTCTGTGactataaaatttaagaaaccaAGGATTCCTGCTGCTCCCCCTATAATAGAAAGGCCGACTGACGTCTGGTTGTATCTAAAGGATTTGAACCCTACTGGACCATACAGCTGCTTGCTTTGTCATGACTGGTTCATCAGTAGACCCAAAATTGTTATTCATTATATCCTTAACCATAGAAAGGGATTTTGTGGAATTTGTAGATATTTTGTTCCTGATAGAGAATCATGGTCTGAACACTTGACATTCCATTCTCCATGGCCCTGTTCGCAATGTGTTAAAAACTTTGATACAGAGCCAGAATTACGGGATCATCTCAGCTCTGTACACAACTTGGTTCACTGTAAGCTGTGTCACTTTCGTGTATCTGACAATGACCAGTACAACACCCATTTATTAGGGAAacacaatgttacaaatgtAAGTAGCAAGAACCAACCTTATCCATGGGAACTAGAAGACGATGGAACTACAGATTTCCTTTGCCTGCTGTGTAACAAATCTCATAATGCAAATTCTTCATTCTTTACCCATTATATGGGCCAGCATCATTTCACCATCAAATGTTTAGCCAAAATAATATCTGGTATTAATTTGCCATTCATAGTTTTGGGTGCAAATCTTAGCGCTCAATTCATTCATGGGCAATTAAGCAAGCATAGCAGGTTTGGTTACATAGAGCCAGATGATAAAAGTAATGATTCAAGTGTTAAGAATGATTTAACACCAACAGCATTGCTTAATGATATGTtacctcaaattaagcaagagTCCTTAAGTGATCAAGAAGAACCAAAATTGGAGACAGTAATCAAATTTGAACCTATCAGTGATATTATGGACCACATAGCTGAGGAGGACTTTGATATAACTCAAATGGAGTTGATAATACCAGAGAAATGTTACTATGACTATgtaaactatttattaaaacatgtaAACTTGAATCAGATGCCAGTGAACTCAGACATTAATTATGGACCATCAAGAGATAATGTGTTCATTGATATATTATGTTGTCTTTGCAAGACGAAACATAGTACAGTTCAAAACTTGCTGATACATATGAGTAAAATGCATTCTATTAAATCCACACTATTTTATTCATGTAGAGTCTGTGCAGCTAGTTTTGAAAGTCAAAGTGATCTTGATACTCATGTAAATGAGGAGTTGGGTGAATTTGATGACTTATGGTTGTGTCAGTTTTGTGACAAGGAGTTTGATAATCGGGAAAGAGCAAGGAATCATTTGTCTGAACATTGGAATGAGATGGAATATGATAATTGTTTCAGTCCTCACTTAGGTTTTAAATGTGAGCACTGTCCAATGTTGTTCTGGAACGAGACTGATAGACAAGTGCACCAAGTGAGGGTTCACTTTGATAAATATAAGGAGCAGTATTATTGGTGTGACAGTTGCAATGAGACATTTAGTGACAAGGTATGGTTTAGCCACCACTACATAGACAAGCATGTAAAAGAAGAGTATAAACCAATGTATCTCCTTAAATGCTTAATGTGCTGTTTGATCAGGCCAAATTTGGAGGATATGAGGAGTCATTTCAAAGAGAACCATCCTGATGCAAAGAAAGTGTACTGCCATTTGGATGGTTGTAAATTTAGGCCGCTGAGTCATCAGAAGTCATTTAAAGTGCACTTAAAGTCCATACACGATCCTTCATCATTGAAACAACGGATGGCGAGATGTGCGGTCTGCAAACGGGAGTTCGCGAACAGCAGGGCTTGTGGGGCCCATATGGCTCAGAAACACGGCCCGGGAAGATTCAAGTGCAAATTGTGCAGCGATACTTTGGCCACAATGGATGAGAGGAAACTGCACTACCTGATCGCTCATCCTGGCCAGCATCCTTATCAATGCGAAGATTGTGGGAAAGCGTTCCAGTACAAGTCCACTCTGTATATGCACAAAAAGGATCATGTCCCTGTGAAGGAGAGCTACCCGTGCTCGTATTGTGGAAAAGTGTTTGCGAAACGCGACTCGTTCCGCGAGCACGTGGCGATCCACGAGGGCCCGCGGCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCGAACATGCTGCGCCACGAGCGGCGGCACACCGGCGAGCGGCCCTACTCGTGCCAGTACTGCCCGCGCACCTTCGCCGACAAGGGCGCCTGCACCTCGCACACCAGAACTCACATTCGGGATAAGTCTTTCTCCTGCATGTACTGCGGCCAAACATTTGTGCAGAAGTCAAAGTTGACTTATCACATACGAAAACATACTGGAGAAAATTTGGAGACATGTACGGTGTGCTCAAAAATATTCACCAGTGCATGCTCACTGCGGGAACACATGAAGATTCATGTGGCAAAGAAGGATATCGTGAAATGTCCCTTATGCGATAAGAAGTATCAAGATGAAAGGTGTATGTTACGTCACCTGAGAACGTCGCACGCTCACCCCAGCTACAAGTGCCCCGTGTGCGCCAAAATGATGACCAGCGCAGCGGGTCTCAGGGACCACGTATTCACGCACAGCCGGATCAAATCCTACAGGtGCAAAGTCTGTCCAAAAGGTTACAACAGCAAACGTACGATAATAAAACACCTACGTCGGCGCCACGGTTTCAAAAGTGACGTTGTAAAGAGCTATTTCCGTCGTCTCGATCCAAGAGAATGCCAATTTGGGCTCGACGAAGACGTTATGACTAAAATATTTGGACAACCAAAGAAAATCTACGAAAAAACGACAGTCCCAGTTGAGTTCGAACCACCCCTTGTAGAAGACAATGTGCGAAAGAGTCAGAAAGTGAAAGTGAAAAACAATGCTAAGAATGTGAAAGAAAGTAAGAGTCAAATAGAACAAGAGAGCGATAAGGACAGTGATAGTGGAAATAGATCGATCAAGCAGGAAAAAGAAGATAATTATGATGAAGAACTGGAACCAACTGATTTTGTTAGTGTTAAAATCGAGCCTATGGACTATGAGGAGAactaa
Protein Sequence: MSAEESDDEPLSVLAATKKLNPELFNIPSLEVTLVPKKKKKKKTIQSKEPSVTIKFKKPRIPAAPPIIERPTDVWLYLKDLNPTGPYSCLLCHDWFISRPKIVIHYILNHRKGFCGICRYFVPDRESWSEHLTFHSPWPCSQCVKNFDTEPELRDHLSSVHNLVHCKLCHFRVSDNDQYNTHLLGKHNVTNVSSKNQPYPWELEDDGTTDFLCLLCNKSHNANSSFFTHYMGQHHFTIKCLAKIISGINLPFIVLGANLSAQFIHGQLSKHSRFGYIEPDDKSNDSSVKNDLTPTALLNDMLPQIKQESLSDQEEPKLETVIKFEPISDIMDHIAEEDFDITQMELIIPEKCYYDYVNYLLKHVNLNQMPVNSDINYGPSRDNVFIDILCCLCKTKHSTVQNLLIHMSKMHSIKSTLFYSCRVCAASFESQSDLDTHVNEELGEFDDLWLCQFCDKEFDNRERARNHLSEHWNEMEYDNCFSPHLGFKCEHCPMLFWNETDRQVHQVRVHFDKYKEQYYWCDSCNETFSDKVWFSHHYIDKHVKEEYKPMYLLKCLMCCLIRPNLEDMRSHFKENHPDAKKVYCHLDGCKFRPLSHQKSFKVHLKSIHDPSSLKQRMARCAVCKREFANSRACGAHMAQKHGPGRFKCKLCSDTLATMDERKLHYLIAHPGQHPYQCEDCGKAFQYKSTLYMHKKDHVPVKESYPCSYCGKVFAKRDSFREHVAIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYSCQYCPRTFADKGACTSHTRTHIRDKSFSCMYCGQTFVQKSKLTYHIRKHTGENLETCTVCSKIFTSACSLREHMKIHVAKKDIVKCPLCDKKYQDERCMLRHLRTSHAHPSYKCPVCAKMMTSAAGLRDHVFTHSRIKSYRCKVCPKGYNSKRTIIKHLRRRHGFKSDVVKSYFRRLDPRECQFGLDEDVMTKIFGQPKKIYEKTTVPVEFEPPLVEDNVRKSQKVKVKNNAKNVKESKSQIEQESDKDSDSGNRSIKQEKEDNYDEELEPTDFVSVKIEPMDYEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433407;
90% Identity: iTF_00433407;
80% Identity: -