Basic Information

Insect: Dendrolimus pini
Gene Symbol: ikzf1_1
Assembly: GCA_949752895.1
Location: OX457151.1:10725976-10743965[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.4e-05 0.0051 18.1 1.4 1 23 288 310 288 310 0.98

2 12 0.95 90 4.8 0.0 2 23 318 340 317 340 0.93

3 12 4 3.8e+02 2.8 1.6 1 23 344 366 344 366 0.96

4 12 0.035 3.3 9.3 1.4 1 23 371 394 371 394 0.96

5 12 0.0014 0.13 13.7 0.4 1 23 400 423 400 423 0.96

6 12 0.2 19 6.9 0.2 1 19 431 449 431 451 0.96

7 12 0.013 1.3 10.6 0.4 2 23 463 484 462 484 0.95

8 12 0.006 0.57 11.7 3.0 3 23 492 513 491 513 0.96

9 12 0.0002 0.019 16.3 0.7 2 23 532 553 531 553 0.97

10 12 7.5e-06 0.00071 20.8 1.2 1 23 559 581 559 581 0.99

11 12 2.9e-06 0.00027 22.1 2.6 1 23 587 609 587 609 0.98

12 12 1.5e-05 0.0014 19.9 2.3 1 23 615 638 615 638 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.4e-05	0.0051	18.1	1.4	1	23	288	310	288	310	0.98
2	12	0.95	90	4.8	0.0	2	23	318	340	317	340	0.93
3	12	4	3.8e+02	2.8	1.6	1	23	344	366	344	366	0.96
4	12	0.035	3.3	9.3	1.4	1	23	371	394	371	394	0.96
5	12	0.0014	0.13	13.7	0.4	1	23	400	423	400	423	0.96
6	12	0.2	19	6.9	0.2	1	19	431	449	431	451	0.96
7	12	0.013	1.3	10.6	0.4	2	23	463	484	462	484	0.95
8	12	0.006	0.57	11.7	3.0	3	23	492	513	491	513	0.96
9	12	0.0002	0.019	16.3	0.7	2	23	532	553	531	553	0.97
10	12	7.5e-06	0.00071	20.8	1.2	1	23	559	581	559	581	0.99
11	12	2.9e-06	0.00027	22.1	2.6	1	23	587	609	587	609	0.98
12	12	1.5e-05	0.0014	19.9	2.3	1	23	615	638	615	638	0.97

Sequence Information

Coding Sequence: ATGAATATTACTTCAGAAATAATATCGTGCCGCGTTTGTCTTATAACCAATGTGAAAATGTACGATATGTACAAATATCGAGTAAAAGATGTATATGAAAGCTtgataaatacgaaaGTACCAGTCCCAGACTTTTTGCCCCATCACCTTTGTGTATACTGCACCTCGTTGCTGCTGAAATTTTCACAATTTAAAGAGAAATGTCTGAAATCACAGTATTTGTTAAGGAATACTCACTCGAAATATAACCAGTCATCATTGGATGTGTTTAAGAATTCTGATGTTAAAACACACATTATTCATCCATCATACGATATATTTCATGCAGAAGTTGTAGACATACCACCTATAAAACTCGAACACGATTTTAATGATTATCACAGAAACGGCATATATAACAATGACTTTTTAGATAATAAGAATGTATTTAAAGATGATAAAATTGAAGACATAGACGATAAATATGGATATGTGCATGATAAGAATGAAGAAATAGACGATAAGAATAGTTATGCCGATGATAATGATATACATGCAGATGATAAAAATGGTTATTCAAACTTAGGCGATGTTTTACTGAATGGTGTTAGAAATAATTCCATAATTcaaatagataatattattatagataatatagtaACAGTGGGCACAGATGATTTGTTAAATGGATCTGAAGTAAGTAGTGATGAAGAACCATTGTCAAGGAAGAAGAAAGATAGTAATAGAAAtgtaaagaaaaagaaattaaaagagAGCACAGAAAGTATTAGTGCAGAGATTGATATAGTAGTATTGAGTAAAGAGGAGCAAATTAAAGAAGTAGAAGATAGGAAGTgttcatataattatttaagttcgtactataaatgtgaatattgttacaaaggaTTTGTCACTGAAGGCACATATAAGAATCATATGGTTCGGCATGATCCTAGTAGTGGTCCGATGGTAtgcgacatttgcaacacaaggtGGCCCGATGTAAGAGCATTGAAAGCTCACGTACTCGTCTCGCACAAGAGGAAATATATTTGCAGACTGTGCAACAACATCTCGCGGAATTTGCACAAAGCGAAAGAGCACCAGAATTGGCACAACGGCTTCAAGTTCGTTTGCAACGTGTGCGGTGCCATCTTCGACAAGTCCACGACGCACCTGACGCACCTGCGCACGCGGCATCCGTCGCAGCACGACCACACCTGCGACGAGTGCGGCGAGAGTTACATCAGCGAGGTCGGCTTGAGTATGCACAAGAAGAAAGCGCATCGGGAGAGTAAGgTAGCATTATTCCAATGCGGTAGTTGCAAAGTACAGTTCGCGAACAAAGCAGCTGTGAACAAACACAACTCCTTTGAAGGGTTTTGTACAGATAGCAAATTAAAaCCTTGCGTGAAATGTGGTGATCATTTCGATGATGAAGATTCTTTGAGAGTACATTTGAAAGGGCACCAAAAGGACGATTCGGTGGATTGTCAGTTGTGCAATAGGTCGTTTTCGAACGAGCGCACCTTCGCCGTCCACCACCAGCGCTTCCACGTCGGCAAGCTGAGGAGGGACAAGAAGCAAATGGCCGCCAAGAGGCAGGAGTGGGTGTGCGAGGTGTGCGGCGTTACTTGTATTACGAAAACAATGCTTTTGTACCATCAGAGGACGCACACCGGCGAGAAGCCGTACCAATGTACCCAATGCCCGAAGTCCTTCAGGATCTATCAGAGTTTGCAGatCCACGTTAGGACGCATACGGGTGAAGCCCCCTTCAAGTGCACGCAGTGCCCGAAGGCCTTCAAACACAAAGCCGGCCTGAACAGGCACAATCGCGTGCATACGGGCGCGAAGCCATATTCTTGTCCGCACTGCAGCAAGTCATTCTCGCAGTCCAACTCTATGAAGCTTCACGTGTCTACGGTACACCTCAAAATGCCGGCGCCGTACAAGAATCGCGCCAAAAACAGGCAAATACATGACTCTATTGAAACTGCATAA
Protein Sequence: MNITSEIISCRVCLITNVKMYDMYKYRVKDVYESLINTKVPVPDFLPHHLCVYCTSLLLKFSQFKEKCLKSQYLLRNTHSKYNQSSLDVFKNSDVKTHIIHPSYDIFHAEVVDIPPIKLEHDFNDYHRNGIYNNDFLDNKNVFKDDKIEDIDDKYGYVHDKNEEIDDKNSYADDNDIHADDKNGYSNLGDVLLNGVRNNSIIQIDNIIIDNIVTVGTDDLLNGSEVSSDEEPLSRKKKDSNRNVKKKKLKESTESISAEIDIVVLSKEEQIKEVEDRKCSYNYLSSYYKCEYCYKGFVTEGTYKNHMVRHDPSSGPMVCDICNTRWPDVRALKAHVLVSHKRKYICRLCNNISRNLHKAKEHQNWHNGFKFVCNVCGAIFDKSTTHLTHLRTRHPSQHDHTCDECGESYISEVGLSMHKKKAHRESKVALFQCGSCKVQFANKAAVNKHNSFEGFCTDSKLKPCVKCGDHFDDEDSLRVHLKGHQKDDSVDCQLCNRSFSNERTFAVHHQRFHVGKLRRDKKQMAAKRQEWVCEVCGVTCITKTMLLYHQRTHTGEKPYQCTQCPKSFRIYQSLQIHVRTHTGEAPFKCTQCPKAFKHKAGLNRHNRVHTGAKPYSCPHCSKSFSQSNSMKLHVSTVHLKMPAPYKNRAKNRQIHDSIETA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433390;
90% Identity: iTF_00433390;
80% Identity: -