Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457124.1:27069497-27078863[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00014 0.013 16.8 1.2 3 23 265 285 264 285 0.96

2 10 0.0014 0.13 13.7 1.9 1 23 291 313 291 313 0.98

3 10 2.3e-05 0.0021 19.3 6.1 1 21 318 338 318 340 0.95

4 10 0.00042 0.04 15.3 0.2 1 21 344 364 344 365 0.94

5 10 0.13 12 7.5 5.4 2 23 376 397 375 397 0.97

6 10 0.0013 0.13 13.7 0.1 1 23 403 425 403 425 0.97

7 10 4e-05 0.0038 18.5 0.6 1 23 431 453 431 453 0.99

8 10 6.9e-05 0.0065 17.8 6.0 1 23 459 481 459 481 0.96

9 10 8.9e-06 0.00084 20.6 0.2 2 23 488 509 487 509 0.96

10 10 0.0017 0.16 13.4 2.0 1 23 515 538 515 538 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00014	0.013	16.8	1.2	3	23	265	285	264	285	0.96
2	10	0.0014	0.13	13.7	1.9	1	23	291	313	291	313	0.98
3	10	2.3e-05	0.0021	19.3	6.1	1	21	318	338	318	340	0.95
4	10	0.00042	0.04	15.3	0.2	1	21	344	364	344	365	0.94
5	10	0.13	12	7.5	5.4	2	23	376	397	375	397	0.97
6	10	0.0013	0.13	13.7	0.1	1	23	403	425	403	425	0.97
7	10	4e-05	0.0038	18.5	0.6	1	23	431	453	431	453	0.99
8	10	6.9e-05	0.0065	17.8	6.0	1	23	459	481	459	481	0.96
9	10	8.9e-06	0.00084	20.6	0.2	2	23	488	509	487	509	0.96
10	10	0.0017	0.16	13.4	2.0	1	23	515	538	515	538	0.96

Sequence Information

Coding Sequence: atGCAAATGCATGTTACAGGCTTCGTTGAAGCGTCaTTAAAATGCGAGCCTTCAGACGAAGATTCAAACCCCTTGCCAAGCTCAGAcaaaacatacacacacaatcATATTAAACTTGAAATTCCACAAGAACTGCCAATAGAAAATAGTAAACCAGAAAACGTATCTTTGAATACTACTATTGAAATTGATGTGATGCCCAACCCACTAACAATGTTAAATCTAACACCTGATTTAAAGAAAAACTTAGTAAATGATTTACCAAATGGTTTTCAAAATGGTTACCTAAATGGCATGTTGGAGAAGAAATTTGATGAAGGCAGATATGCTAAAGAGCTACACAACACATTTAGCAATTATTTTGCAAATGTAGGAGATACTACTATTTTTAAACCAGTGATGAATGCGCTGGCAAACAGTGTGCAACAAGGAATCTCGAATGCATCATGCAACAAAGGATCTAAAGAAACAAAATCAAAGAGGAAACTCCAAAACGCACAAAACAGAAAACGCAAGATGGACGGAGTTCTGGAGAAACTGTACAGAGAGAGTCTGAAGAAAGATCTGATGAAAAACGGAAAAAATATTGAAGGAGTAGTGGAAGATAGTGCAACGGAAAATAAAACGCTATTTgatggaaaaaataaaatcgttgATATTGTTTCTACGCCCGAAGTAAAAGAAGAATCATTTTATAACGACAGCGATTCTGGTGGTTCTAATCCCCTGTTACAAGTGTTCACAATCCGTGAAGGCTTTCCTCTACCAGAATTTAACTTAGAGGATAGGGACTGTCCCATTTGCCATGAGGGTTTCTCGAGCCCCGCGAACATGCAACGCCATTTTCACATACACACCAAAAACTCGAACTACGAATGCaaaatttgcaacatcaaattCTGGAGACGGCAAGAGATGACCAAACACATGTACCGTCACGACTTACGCGAGTTTGAATGCGAGATCTGTCATAGGAAATTTAAGTCTAAATCCAACTTGAATCAACATATAAAGTGTCATACGGAGAGATTTAATTGCGTTATCTGTGACAAGAGCTACCCGACCAAAGCTTTATACGAGAAGCATGTCAACAGAAAGTTATGTAGACGTAAAGGCGCGTTGCTTCGTTGCCCAGTTTGCTTCAAAGGCTTCAAATATGAATGCTCATTGAAATGTCACGTACGCAGGCATTCTCCAGACAGACCGTACATATGCGATCTGTGCGGTATGGATTTTGAAACTAAACGAGAGATTGTCAATCATATCAATTACCACACTCGCGCTAGACCTTTTAAATGCAACGTGTGCCCTAAAAGGTTTGCAAACATGGCGTTCAGAAGGGCTCATATGCGAATACATACTGGAGAAAAACCTTATAAATGTCCGATATGCGAACGGCATTTCACTCATAAGCACAACATGGAGAGACACACCGAAGGGCATGCTAAGGAGAAGAAACTAATCTGCGATATATGCGGAAGAAAGTTTCCGCGAGAGAGTCGTTTGGTATATCACATGCGAAGTCATTTTGACAGGCGACCATTCGCATGCGAGGCTTGTCCCAAAAAGTTTGCGCACAAGCAGAACGTTTTGAAGCATTATCAAAGGACTCATCCAGGTTCGGTGTATTCTAATCGAGAGACCGACGCCTCGGTTGCTTATAAAACTTGGCGTGAGATTCAAAGTAAGCTCATTACTATGCCTGAGGAGGAATGTGAGCAAATTTTGGGCTAA
Protein Sequence: MQMHVTGFVEASLKCEPSDEDSNPLPSSDKTYTHNHIKLEIPQELPIENSKPENVSLNTTIEIDVMPNPLTMLNLTPDLKKNLVNDLPNGFQNGYLNGMLEKKFDEGRYAKELHNTFSNYFANVGDTTIFKPVMNALANSVQQGISNASCNKGSKETKSKRKLQNAQNRKRKMDGVLEKLYRESLKKDLMKNGKNIEGVVEDSATENKTLFDGKNKIVDIVSTPEVKEESFYNDSDSGGSNPLLQVFTIREGFPLPEFNLEDRDCPICHEGFSSPANMQRHFHIHTKNSNYECKICNIKFWRRQEMTKHMYRHDLREFECEICHRKFKSKSNLNQHIKCHTERFNCVICDKSYPTKALYEKHVNRKLCRRKGALLRCPVCFKGFKYECSLKCHVRRHSPDRPYICDLCGMDFETKREIVNHINYHTRARPFKCNVCPKRFANMAFRRAHMRIHTGEKPYKCPICERHFTHKHNMERHTEGHAKEKKLICDICGRKFPRESRLVYHMRSHFDRRPFACEACPKKFAHKQNVLKHYQRTHPGSVYSNRETDASVAYKTWREIQSKLITMPEEECEQILG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433398;
90% Identity: iTF_00433398;
80% Identity: -