Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457138.1:9099293-9118588[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00044 0.042 15.2 0.2 2 23 141 162 140 162 0.93

2 10 0.00064 0.061 14.7 2.4 1 23 168 190 168 190 0.96

3 10 0.00022 0.021 16.2 0.1 1 23 282 304 282 304 0.98

4 10 0.00041 0.039 15.4 0.0 3 23 384 405 382 405 0.90

5 10 0.0078 0.74 11.3 0.1 1 23 421 443 421 443 0.96

6 10 1.6e-05 0.0015 19.8 0.2 1 23 477 499 477 499 0.98

7 10 0.00069 0.065 14.6 0.2 1 23 505 527 505 527 0.97

8 10 0.00039 0.037 15.4 0.3 1 23 533 555 533 556 0.95

9 10 0.017 1.6 10.2 0.1 1 23 569 591 569 591 0.96

10 10 0.0083 0.79 11.2 0.4 1 20 735 754 735 757 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00044	0.042	15.2	0.2	2	23	141	162	140	162	0.93
2	10	0.00064	0.061	14.7	2.4	1	23	168	190	168	190	0.96
3	10	0.00022	0.021	16.2	0.1	1	23	282	304	282	304	0.98
4	10	0.00041	0.039	15.4	0.0	3	23	384	405	382	405	0.90
5	10	0.0078	0.74	11.3	0.1	1	23	421	443	421	443	0.96
6	10	1.6e-05	0.0015	19.8	0.2	1	23	477	499	477	499	0.98
7	10	0.00069	0.065	14.6	0.2	1	23	505	527	505	527	0.97
8	10	0.00039	0.037	15.4	0.3	1	23	533	555	533	556	0.95
9	10	0.017	1.6	10.2	0.1	1	23	569	591	569	591	0.96
10	10	0.0083	0.79	11.2	0.4	1	20	735	754	735	757	0.93

Sequence Information

Coding Sequence: ATGGACGGGGAAGGTGGTTTCCACCTCCATTGGGAGGAAGAGGTGGTTGTGAAGCAATGTCCAGATGAAACTGTAAATGAAGAAGTTATCTGTGGGCTTGACGGTGTGCAGGCTGGATCCTATTCTAATATGATGAAAGAAGAGATAATAATAGGAGACACAGATCAAATGGCTGCTGAGAATCTGATGTTCTTGGCTCAGGATGTGGTGAATTACACAGACGCAGCAGACCTCGATCCCAGTGTGGAGTGTGTTACCGAGGAGGTGATCACAGATGACTGGGTTGGCCCTGGGGGCCAGGAAAGGGTGGAAGTACCATTGGAACACTTGGCGCATCCTGGATTAGATATTAAAGAAGATAATGATATTGATGTTCCACTACCTACAGATCAGGACGAGTACACCGCGATGCGGCCGTGGCCGTGCGACTTCTGCTCGCGCCGCTTCCGCAAGAAGGCGGCGCTGATGAACCACATGGTGGCGCACCAGAACGACAGGCCGCACGCGTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATGAACCACCTCAAGGTGCACGCGTTCGTGCCCGACAACGAGGACGCCGTCGACTATGAAGAATTACTAGACAATCAACTTGTAAAACCAAAGAAGAAGCGTGGTAGGCGGAAAAAGAATCCAGAGCCTGTTGAgAATGGTGTTTGGGAGAACATGACGTCCGCGCGCACGCAGCAGTGGTCGCGGCGGGCGCGGTCGCCGCCCAAGCGGGAGCCGACGCCCCCCTCCCCGCCGACGCCCCCGTCCCCGCCGCCGCCCTCGCCGCCCCCCCCGCCCGCGGACCCCTCCAGGCCGTTCGTCTGCAGACAGTGTGGAATCGGATTTGCGAGGGAGAAAGCACTACAATCACATTCTAGAATCCACGGCGGCGATTCGCCGGTGGAGTGCGGCGAGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTCGCCTCGCACGCCGCCTCGCGGCACCCGCACCTGCCCGCGCCCACCTCGCGCCGCGACCACGAGCAGCCCTACGAAGACACCGACTCCAGTGACGACGGCGGCTCGTTCAAGCTGTCGCCGACGTCGGCCGGGGAGCGCGCCGTCTTCGACACGATGCGCGGCCCGGAGCTCTTCTGCCAGGACTGCGGCGTGGCCTTCCAGCGGCCGGACCTGCTCCGGAGGCACGTCGCCGCCGCCCACAGCTACAAGCGGCACGACAGCGCGAGCAGTGGGTGGGGCGAGGAGCACACGTGCGAGGTGTGCGGCGAGGCGTGCGCCGACGCGCTCTCGCTGCTCGCGCACGCCGAGCGGCACGCGGACCGCACCACGCCCGACCACACGGCCAGCAGCCACAGaatgaAGAGAATGTCAAGGGGCCGGAATAACTTCTCTTCCTCAAGTGGTTCCAGACAGTTTCCATGTCGTGTTTGTGGTAAAGTGTTTGGTTCGCGGAGTTCCCAGCAGATACACATACGAATCCACACGGGGGAGCGGCCGTACGCCTGTCGGTTCTGCTGGAAGGCGTTCGCCGACGGCGGCACGTTGCGGAAGCACGAGCGGATACACACAGGTGAGAAGCCGTACGCGTGCGCGGTGTGCCCGCGGGCCTTCAACCAGCGCGTCGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCAGATCGACGCGCAAATGGCGGGCCCGCGTTCAACTGCGTCGTGTGCGGGCGCGCGCTGCACTCGAGCGGGGAGCTGGTGCAACATCTCATTGAACACTGCGACGCGAACACCGCGCTCAAGAGGCAACCTCAGAGTGGTCCCCGCAAGTACAGACGGCGGCGGAAAATAAAGAACGAGCCGGCGGAGCGCGACCGCGAGTGGGCGCTCCCCTCGGACAGGGagggggcggcggcggcggcggggggCGGCTCGCCCGCGCCCTCCCGGAGCCCCGCGCCCGAATCGCCCGCGGCGTCGCCCCCGCGCGCCTCCCCGCCGCCGCCCCGGCGCAGGCGCCGGCGGCTGCCCGAGCCCCCGCCCAGGCCCAAGATGATACACACCGAGGACCCCAGGGCTAGGACCAAACAGGTGCGCACGCGGCGGCCCCCGCGGCACCCGGCCGACGACCTGCGCGCCATCGGGCCGGCGGCGGCGTCGCCCGCGTCCCCCCCGCGCTCCCCGCCCGCGTCCCCGCCGCGCGCCCCCTTCAAGTGCGAGATGTGCTCGGAGGAGTTCCACCGCCGCGACGAGCTGCTGTTGCACGTGCCCGTGCACATATGA
Protein Sequence: MDGEGGFHLHWEEEVVVKQCPDETVNEEVICGLDGVQAGSYSNMMKEEIIIGDTDQMAAENLMFLAQDVVNYTDAADLDPSVECVTEEVITDDWVGPGGQERVEVPLEHLAHPGLDIKEDNDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDNEDAVDYEELLDNQLVKPKKKRGRRKKNPEPVENGVWENMTSARTQQWSRRARSPPKREPTPPSPPTPPSPPPPSPPPPPADPSRPFVCRQCGIGFAREKALQSHSRIHGGDSPVECGECGELCWSREALASHAASRHPHLPAPTSRRDHEQPYEDTDSSDDGGSFKLSPTSAGERAVFDTMRGPELFCQDCGVAFQRPDLLRRHVAAAHSYKRHDSASSGWGEEHTCEVCGEACADALSLLAHAERHADRTTPDHTASSHRMKRMSRGRNNFSSSSGSRQFPCRVCGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAFNCVVCGRALHSSGELVQHLIEHCDANTALKRQPQSGPRKYRRRRKIKNEPAERDREWALPSDREGAAAAAGGGSPAPSRSPAPESPAASPPRASPPPPRRRRRRLPEPPPRPKMIHTEDPRARTKQVRTRRPPRHPADDLRAIGPAAASPASPPRSPPASPPRAPFKCEMCSEEFHRRDELLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433385;
90% Identity: iTF_00433385;
80% Identity: -