Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457129.1:3974091-3989858[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.0012 0.12 13.8 0.9 1 23 193 215 193 215 0.97

2 31 0.0043 0.41 12.1 0.2 2 19 245 262 244 265 0.93

3 31 0.0013 0.12 13.8 0.1 1 23 293 316 293 316 0.97

4 31 0.0046 0.43 12.1 0.9 2 19 333 350 332 353 0.93

5 31 0.053 5 8.7 1.0 1 23 364 387 364 387 0.95

6 31 0.00025 0.023 16.1 0.4 1 23 397 419 397 419 0.98

7 31 0.00013 0.012 16.9 3.3 2 23 451 472 450 472 0.97

8 31 0.00096 0.09 14.2 1.2 2 23 513 535 513 535 0.96

9 31 0.0045 0.43 12.1 0.7 1 23 585 608 585 608 0.97

10 31 0.0015 0.15 13.5 0.2 1 23 668 690 668 690 0.97

11 31 0.0025 0.24 12.9 5.1 2 23 702 723 701 723 0.97

12 31 0.018 1.7 10.2 0.5 2 23 735 756 734 756 0.96

13 31 0.0013 0.12 13.8 0.6 1 23 766 788 766 788 0.98

14 31 0.032 3 9.4 6.7 1 23 817 839 817 839 0.96

15 31 0.05 4.7 8.8 7.6 1 23 850 872 850 872 0.98

16 31 0.00034 0.032 15.6 0.6 1 23 880 902 880 902 0.97

17 31 7.1e-05 0.0067 17.8 0.2 2 23 922 944 921 944 0.97

18 31 0.027 2.5 9.6 1.4 1 23 962 984 962 984 0.93

19 31 0.1 9.4 7.8 3.6 1 23 991 1013 991 1013 0.97

20 31 0.0014 0.13 13.7 0.6 2 23 1024 1046 1023 1046 0.95

21 31 0.0014 0.13 13.7 0.3 2 23 1069 1090 1068 1090 0.95

22 31 2.1 2e+02 3.7 0.8 2 20 1094 1112 1093 1113 0.92

23 31 3.2 3.1e+02 3.1 3.4 2 23 1133 1155 1132 1155 0.94

24 31 0.17 16 7.1 1.8 2 23 1171 1192 1170 1192 0.94

25 31 0.079 7.5 8.2 6.0 3 23 1200 1220 1198 1220 0.96

26 31 0.014 1.3 10.6 0.8 2 23 1231 1253 1230 1253 0.95

27 31 3.5 3.3e+02 3.0 5.0 3 23 1271 1288 1270 1288 0.77

28 31 0.071 6.7 8.3 2.1 2 22 1292 1312 1291 1312 0.94

29 31 0.7 66 5.2 0.6 2 23 1361 1382 1360 1382 0.93

30 31 0.00012 0.011 17.0 0.5 2 23 1393 1415 1392 1415 0.96

31 31 0.025 2.4 9.7 2.5 2 21 1453 1472 1453 1473 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.0012	0.12	13.8	0.9	1	23	193	215	193	215	0.97
2	31	0.0043	0.41	12.1	0.2	2	19	245	262	244	265	0.93
3	31	0.0013	0.12	13.8	0.1	1	23	293	316	293	316	0.97
4	31	0.0046	0.43	12.1	0.9	2	19	333	350	332	353	0.93
5	31	0.053	5	8.7	1.0	1	23	364	387	364	387	0.95
6	31	0.00025	0.023	16.1	0.4	1	23	397	419	397	419	0.98
7	31	0.00013	0.012	16.9	3.3	2	23	451	472	450	472	0.97
8	31	0.00096	0.09	14.2	1.2	2	23	513	535	513	535	0.96
9	31	0.0045	0.43	12.1	0.7	1	23	585	608	585	608	0.97
10	31	0.0015	0.15	13.5	0.2	1	23	668	690	668	690	0.97
11	31	0.0025	0.24	12.9	5.1	2	23	702	723	701	723	0.97
12	31	0.018	1.7	10.2	0.5	2	23	735	756	734	756	0.96
13	31	0.0013	0.12	13.8	0.6	1	23	766	788	766	788	0.98
14	31	0.032	3	9.4	6.7	1	23	817	839	817	839	0.96
15	31	0.05	4.7	8.8	7.6	1	23	850	872	850	872	0.98
16	31	0.00034	0.032	15.6	0.6	1	23	880	902	880	902	0.97
17	31	7.1e-05	0.0067	17.8	0.2	2	23	922	944	921	944	0.97
18	31	0.027	2.5	9.6	1.4	1	23	962	984	962	984	0.93
19	31	0.1	9.4	7.8	3.6	1	23	991	1013	991	1013	0.97
20	31	0.0014	0.13	13.7	0.6	2	23	1024	1046	1023	1046	0.95
21	31	0.0014	0.13	13.7	0.3	2	23	1069	1090	1068	1090	0.95
22	31	2.1	2e+02	3.7	0.8	2	20	1094	1112	1093	1113	0.92
23	31	3.2	3.1e+02	3.1	3.4	2	23	1133	1155	1132	1155	0.94
24	31	0.17	16	7.1	1.8	2	23	1171	1192	1170	1192	0.94
25	31	0.079	7.5	8.2	6.0	3	23	1200	1220	1198	1220	0.96
26	31	0.014	1.3	10.6	0.8	2	23	1231	1253	1230	1253	0.95
27	31	3.5	3.3e+02	3.0	5.0	3	23	1271	1288	1270	1288	0.77
28	31	0.071	6.7	8.3	2.1	2	22	1292	1312	1291	1312	0.94
29	31	0.7	66	5.2	0.6	2	23	1361	1382	1360	1382	0.93
30	31	0.00012	0.011	17.0	0.5	2	23	1393	1415	1392	1415	0.96
31	31	0.025	2.4	9.7	2.5	2	21	1453	1472	1453	1473	0.94

Sequence Information

Coding Sequence: ATGGCCTTTAAGTTGGGAAAATGCAGGCTTTGCCTCAAATTGGGCGACTTTTATTCAATATTCACTGTCGACAATGCCGTGCAGCTCGCCGAAATGGTCATGGAATGTGCAAGAATTAAGGTGTATGAAGGTGATGGTCTGCCTGACAAAGTATGCTCTGATTGTATACAGAAATTGAGTAGTGCTTATATATTCAAACAGCAGTGTGAAAGATCTGATCAGGAGCTACGGAGAAACTATGTACCACCACCTGGTTTTAGTATAACCCCTCCCCCACCGACCCGACAAAGCAGCGACTCGGCCTTTTCGACCCACACAGACAGCTCCAATTTGACGAAAACGAATTCATTTGTTGAGGAGAAAAAAACACCCATTGCAAGGAACCGAAAAAGAAGTATCGAAAGCGATGTTTCCCAAAGTAGTCGCCAAGATGATAGACTTGGTAGCAAACGGGTCAATGAACTACGTCAAAAGAAACCAAGAAAAGAGACTTACCCTATGGACTCTGATTATGAAGATGCTGGATCGAATTACCAACCGGAAACTGACTCTGATGAGTCGTTTACCAAACAAACATTTGACTGCTTTGTTTGTCCAAAAAAATTCACATCAGTAAAGAGTCGGAGTGCTCATATGAGAATTCATTCTCGCAAAGATAGCATGGGTACAGATGCAGTGGTTGACATACCCAAACAATCAATGGTGGACGCCCAAGATTCGGATAGCAAATTAAACTGCGAGAAGTGCggtaaaaactttaaattaaagaTCATGTTGAACCGTCACAGTGCAGTTTGTGATGGTTCACCTTCAAAGAAAGAGTTGACGGTGCCTTTAGAGCCTATCGATCATATTTGGAAAACCAGCACTGATTATTTCGAATGTGAAATTTGCAAAGGCAATTATAAAAGTATTGAAGGTTTGGAGAAGCATATGAGAATTGTGCATGCTGCTGCACTCAAAGTTCCTGAAAAACAAGAAGTCACTGTTACAGTACCATGTAACTACTGCCAAAAACCATTTACTGATTATGACGAGTTTTGCAATCATTTCATAAATTGTACAGAAAGGGTTGAATCAAACAACCCTCACATTTGCCCTATTTGCCAAAAAGCTATAGGTAAAAGGCAAAATTACTTTTCACACTTGAGGGGTAAGCATTTTCTCGTAAGAAGTTGGCCACAGTATTTCGAGTGcaagaaatgtaaaaagaaATTGGCGACGCAAGAGTTATTGATTGTGCACTTGGCGACGCACGTGACGAAAGACGATGATAATGACGATAGCTTTGGTGAATCCaggGACGACTCTGGCTATGGTCCGCCAGCGATCTCCAATCCACAGAGTCTGCAGTGTAAAATTTGCCATAAAGAATTCATTTACAAAAAATCCCTTCAAACACATTTAGAGAAACATACTCCAGAAGAGATTGCAGCCCATGAGAACTCTCTGTTAAGTGATGCCAACAATACGGGTAATAATGACACTCTCAGAGCTTCAGATTCTGAGTCAAGTGGTGATGAATACGAAAGCAACACTTGCGATATATGCGACAAAGATTTCGCATACAGACGCCTGTTAATACAACACAAGAAAAGGAAACACAACATGTCCTCAGGATTAAAACGGGCCAATATAACCTTGAAAGATTGTACAGCAAAATGCTTACTGTGTGATGTTGAGATGAAAGTGAGCTCTATAAACAAGCACAATCAAACTCATATTACAATGAGTATAAAACCAAGGAATGTATATACTTGTGGAGAATGTAAGGAACAATTTCAAAGTTGTTCAGTCCTTGCTAACCATATTAAGATAGTTCATAGactaaaacaatCAACAATACCAAATATGCCGACATCTTCCCAAGAAATGGAAATTAATCCGTCGGATTTTTGCGAAGTCGTTGTGACTAAACCGGAACCCCTGGACGAAAACCAGAGCCACAACGACTTCAGCGAGGTTCCAATAACTAACGCAGCAGCCGTTGATCTTAATGGTTTCACTTGCCCGCTGTGTGGGAAGAAAATGCCCACTCTCATATCACTGAAGCGCCACGTCAATTGGCACTCAAATGTGGGCAACAATATCACCAAGAAGATTGAGTGTTTCGTCTGTAAGGAGACATTCCGATTTCAATGTCACTACAAAATTCACATGCGGGTACATTACAATGATCCTAATCTCGACCCTAAAATTCTCACTTGTTCAATTTGCAATCGTAAGAGCAAAAATCTTCGTGCCGCCCAAGCGCATATGAATTACCACAAACAGACTCGCTTTCAAAATAAAGACTACCAATGCTCCATATGCAAAAGGGTATTCCAAGATAGGAAAGTGTACTTATCCCATATGGCCATACATTATAAGAAAGGTGAAAGTGGTCAAAATACTATTGTCGGTCATGAATTACCGAATACCGCTGACAAAAACTTCTTCGACGGTACCCATACATGCAACATGTGCGGTAAAATTTGCCACTCTGAAACATCACTCAAGCACCATATTATTTGGCATAACTCTAAAGGCCTCCTCTATGGAGCACGACACGAGTGTCACATTTGCAAATTGCACTTCACTAACAAGAAGCGCATGGAAATACATGTTAGGAAGCATTATGAGGACGAAAACGGCCCATTCAAATGTACGATTTGCGGCGTCGGCTACACTGACGAAAATTACTTCAAGAGGCACGTAAAAGGCCACAACTTTGACCACCAATCCCATAAAGACAGGATTGCCAGATTACGGAAGGATAAAGTAAAATGTCCTATATGCCCCCGGTTCTTTGCAGATATGGTTAAACTTATTAGGCACTTGAGAAAAACGCATCCCGAAAGTAAAATGATAAAAGAAGACCCTGATGCACCTGAACCAATCTATTACTGCTGTAAGTTGTGCGCGAAAGTATTTTACGATCCTCGCAGATTGCAAAGCCACGAAGAAGCGCATTTAAGAAAGCCAGAGTTCTTTAAATGCAAGTTTTGTGGCAAGAAGACTATTTCTTTGAAGAATCACAGGGTACACATCAAAGCCCATTTAGTGACTAAACATATTGATAACCCATTGAAGTGTCCTCAATGCGATGAGAGGTTCATTCGAGGATACGACTTGCATTATCATCTTCGTGACGTTCATAATATCAAAGAAACATGGATAGCCGAACGTTCGGAGCGTATTTTAGATGGTCCACTGAAAGATTTACAATGTTCAATCTGCTTCAAAGTCTTAGCGAGTAAGGGTAACTTTGAACGACATTTAGACTATCATAATTCATTACGCTGCAACTATTGTTTTGAGTACTTCGGCACTCACCGGTTCCTCCAAGGCCATTTGGCATTCAGCTGTGAAAAGAAAAAGTTAATTGGCAATACAGAAGTTCATGCAAAAAAGATCAAGTGTGAGATATGTTACAAAGCATTCCACCTGCAAGTAAAACTGGATTGTCATTTGCGTACTCAACATGATATAAAAGTGTCGAGAGAAGCTTCATCAGAACAAAAGGAATGTGTTTGCGATTACTGCTTTAGGTTGTTTGAGAATGAATATGCTCTTAGCAATCATAAAATATACCACCGAACCATAGGTTACTATGGTTGTCGTTATTGTAAAAAGAAGTTTAATACCCTCACTTTGttcaataaacataaaaatcatCATTACGCACAGTTGAATGTAGATAATCCAACGAAATGTGACCATTGCGACGAAACCTTTGTTGCTTTTAGAGATATGATATATCACATGCGTGATGTCCACAAAGACGATAGTGATTGGTTAGTACTGCCCAAAGAGTCTATTGAGGAAAATTGCCATATATGCAAAAAGACCTTCATTAATCTCCATAAGCATttaacataccatgaacaaaataaatgtaagaAGTGTGGCGAATATTTTTATTCGCGTGTAGATTTTGATAACCATCTTTGTACCATCGAAAGTGATGATGAATGTATTGAAACCGCTAATGGTActgttgaaaataaatatgaagaatGTAGATTTTGTTTCAAACCTGTGACTCGAACGTGTTCGAAGAAAGCTCACGAAATTATCCACAGGGGTTCGGGCGCTATATCATGCCGTTTCTGCGTCCTTAAATTCAAGACATTGGACGCCTTCAATATACATGCATTTTCGCACCGTAGTAGAAAGTACTACAAGAAGCCCATACAATGTAAGAAATGTGGCGAAAAGTTTGTGCGATATGGACCCTTTATAAAGCATATGAAATCCGTGCATAAATCAACGAAGAAACTGCATTACAGAGCGCAAATCAAGCCTGAGCCTTGTGTTGTATGTAAAGAGGATTTCCCAAATCTTCACAATCATTATAGAGCTCATTTGCTGAACAGATGCGATGGTTGCCAGAAATATTTCACATCAGCAAAATTGTTTTCGAAACATCAATGTGATCAAGAAGACAGCGATCCCAGTAAAGTATTTATTTGTGATGAGAATTTACAAGCTCTCATTAATTCTTATGTTCCTAAGGATTTGAAGGATGACGAAAAATTCTATGGTCATGATgacgataccgaggatgaagaTGAACTAAAGAATGCAGAAAATCCTGAGATGGAAACGAAACCAGTTATTTCGGGGGTATTGTCTCTATTTCAACAGAACGACAGTCAAGATGCGAAAAGTCAAGACGGTGATGATATCAGTCAGAACAAATATCACAAGCTTTACTCAGTGTACTCTTTATAG
Protein Sequence: MAFKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMECARIKVYEGDGLPDKVCSDCIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSITPPPPTRQSSDSAFSTHTDSSNLTKTNSFVEEKKTPIARNRKRSIESDVSQSSRQDDRLGSKRVNELRQKKPRKETYPMDSDYEDAGSNYQPETDSDESFTKQTFDCFVCPKKFTSVKSRSAHMRIHSRKDSMGTDAVVDIPKQSMVDAQDSDSKLNCEKCGKNFKLKIMLNRHSAVCDGSPSKKELTVPLEPIDHIWKTSTDYFECEICKGNYKSIEGLEKHMRIVHAAALKVPEKQEVTVTVPCNYCQKPFTDYDEFCNHFINCTERVESNNPHICPICQKAIGKRQNYFSHLRGKHFLVRSWPQYFECKKCKKKLATQELLIVHLATHVTKDDDNDDSFGESRDDSGYGPPAISNPQSLQCKICHKEFIYKKSLQTHLEKHTPEEIAAHENSLLSDANNTGNNDTLRASDSESSGDEYESNTCDICDKDFAYRRLLIQHKKRKHNMSSGLKRANITLKDCTAKCLLCDVEMKVSSINKHNQTHITMSIKPRNVYTCGECKEQFQSCSVLANHIKIVHRLKQSTIPNMPTSSQEMEINPSDFCEVVVTKPEPLDENQSHNDFSEVPITNAAAVDLNGFTCPLCGKKMPTLISLKRHVNWHSNVGNNITKKIECFVCKETFRFQCHYKIHMRVHYNDPNLDPKILTCSICNRKSKNLRAAQAHMNYHKQTRFQNKDYQCSICKRVFQDRKVYLSHMAIHYKKGESGQNTIVGHELPNTADKNFFDGTHTCNMCGKICHSETSLKHHIIWHNSKGLLYGARHECHICKLHFTNKKRMEIHVRKHYEDENGPFKCTICGVGYTDENYFKRHVKGHNFDHQSHKDRIARLRKDKVKCPICPRFFADMVKLIRHLRKTHPESKMIKEDPDAPEPIYYCCKLCAKVFYDPRRLQSHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKAHLVTKHIDNPLKCPQCDERFIRGYDLHYHLRDVHNIKETWIAERSERILDGPLKDLQCSICFKVLASKGNFERHLDYHNSLRCNYCFEYFGTHRFLQGHLAFSCEKKKLIGNTEVHAKKIKCEICYKAFHLQVKLDCHLRTQHDIKVSREASSEQKECVCDYCFRLFENEYALSNHKIYHRTIGYYGCRYCKKKFNTLTLFNKHKNHHYAQLNVDNPTKCDHCDETFVAFRDMIYHMRDVHKDDSDWLVLPKESIEENCHICKKTFINLHKHLTYHEQNKCKKCGEYFYSRVDFDNHLCTIESDDECIETANGTVENKYEECRFCFKPVTRTCSKKAHEIIHRGSGAISCRFCVLKFKTLDAFNIHAFSHRSRKYYKKPIQCKKCGEKFVRYGPFIKHMKSVHKSTKKLHYRAQIKPEPCVVCKEDFPNLHNHYRAHLLNRCDGCQKYFTSAKLFSKHQCDQEDSDPSKVFICDENLQALINSYVPKDLKDDEKFYGHDDDTEDEDELKNAENPEMETKPVISGVLSLFQQNDSQDAKSQDGDDISQNKYHKLYSVYSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00948126;
90% Identity: -
80% Identity: -