Dpin025348.1
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949752895.1
- Location
- OX457145.1:8444276-8471711[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-15 8.3e-12 46.0 0.1 3 45 551 593 549 594 0.96
Sequence Information
- Coding Sequence
- ATGGACATGAAACCGGGCGGATCCCTGTGCACGGTGCTCGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAATCCTTCCCGGAAAGATCTCAACGTGCAAATGATGATGGAGATCGAGTCCTCGTTACTTGGGGCTGAGGTGATCAGGTCGCCGTGCGTCTACATCAGGCCAGAGGTTGACAAGGCGACTGCCAATAAACTGAAGGATATCGTTGTTGGGCACCAAGGAGAAATTTGCGAAGATGAGGAGGACGCGACGCACATAGTGTACCCAACCGTGGACCCGGTGGAGGAGGAGTACGCGCGGCCGGTGTACCGGCGCGGCAGCCACGTGCTGGTGCACTGGTACTACTTGCCCGACAGCCACGACACGTGGGCGCAGCCCGATTTACCGgtAGATGTACCTGAAAATGTGAACTGGGATTGCAATAGAGCGGAGCCGTGGCGCGTCACCGCCTCATGGGTGCTGGACTTGCCACAATACAACGAGTGGATGAACGAAGAGGATTATGAAGTTGATTCTAATGGCAagaaaaagGTACACAAGCTAAGACTATCCGTGGACGACCTGATACCCGGCGCAGAGCCATCGAGTAAGAGTAAGAAGGGCAGCAAGAGGAAGCGGTCGCCTTCGCCACCGCCACAGAAGCACGGCAAGAGGAAGAGCCGAACCACAAAACGTCGCGACAACGACGTCGACGAAGACGAAGACACTGCGTCAAGGGATAACACAGATGTGGCGCCCCCGCCGGAAGTGGAAAGGCCTGCAGAAACGAGTACTCCCGCGCCGAGCACCCCCAGTGCGCCGAGTAGCGCCAGTGTTCCGGCCAGTACTAGCGCCAGTAGCACTGCCGCTGCCAGCAGCGCGGCCAGTGCGGCCGAGCCGCCGGCCGAGGCGCCGGCCACACCGGCGCCGCCGCTCGACGCGCACGACGACTCGCAGGGGAAGCACTCCGACTCCAATACCCAGGAGATGCTGACAAAGGAGGAGTTAGAGGACAATGTGACGGATCAGACCCACCATATCGTAGTACCCTCGTACTCGGCGTGGTTCGACTACAATTCTATCCACACCATAGAGAAGCGCGCTCTGCCAGAGTTCTTCAACGGGAAGAACAAGTCTAAGACGCCTGAGATATATCTGGCTTACAGAAATTTCATGATCGACACATACCGTTTGAACCCAACTGAATATTTGACCAGCACCGCGTCGAGGAGGAACTTGGCCGGCGACGTGTGCGCCATCATGCGCGTCCACGGCTTCCTTGAACAATGGGGCCTCGTCAATTACCAGGTGGAAACAGAATCTCGGCCCACAGCCATGGGACCTCCGCCGACGTCGCATTTCCACGTCTTGTCCGACACTCCTTCTGGCCTCCAGCCGCTTGTCGCCAGACCGAGTCAGCCCAGGCCTGCTGAGAATGTGCCGAAAGTGGAGCCCGGGCTGCCGAACGGGGCGGAGGCGCCGGCGCCCCCCGCCGCGGCGCCCGCGCccgccgcccccgcccccgccgccgccgccgccgccgccgcgcccgtcAAGGCGGAGCCCTCGCTCGAGCTGGGCACGCAGCCGGCACTCAAACTCGATCAGTATCGTGGCGGGTCCCGTGGGCGCGAGTGGACCGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACCCACGACGAGTGCATCCTGCACTTCCTCAAGCTGCCCATCGAGGAGCCGTACCTCAATGACACAGCGTCagGTGGTGTATTGGGCCCATTGGCGTATCAACCCATTCCGTTTAGCAAAACGGGCAATCCGGTGATGAGTACGGTGGCCTTCCTCGCCTCCGTGGTGGACCCGCGGATCGCGTCCAAAGCCACCAGAGCGGCCATGGAGGAGTTCGCAGCAATAAAGGACGAGGTCCCCGCGGCGATGATGGAGGCGCACGTGAAGGCCGCGGGCGCGCACGGCCCCGCCGCCGCGCTCGCCGCCACCGGCATCGCGGGCACCGCGCCCGATGTACCCCCGCCAGcAGAGAAAAAAGAAGGTTCAGCCGATGTAAAGAGTGAACCGATGGAAGTGGAAGAAGGGGAAGCTAAGGTCAAAGAAGAGGTTACGGACGCCCCACCCGCAGAGGATAAGGACATTAAAGAGGAACCAACAGCACCAACAGAATCGGGCGGCACCGTGGATGCGAAGCTGCAGTCGGCCGCGGCGGCCGCCTTGGCCGCGGCGGCGGTGAAGGCGAAGCACCTCGCGGGCGTCGAGGAGCGCAAGATCAAGTCGCTGGTGGCGCTGCTCGTCGAGACGCAGATGAAGAAGCTCGAGATCAAGCTCAGGCACTTCGAGGAGCTCGAGGCCACCATGGAACGGGAGAGGGAAGGTTTGGAATACCAACGGCAACAGCTGATTCAGGAGCGACAGCAGTTCCACTTGGAGCAGCTGAAAGCGGCCGAGTTCCGCGCGCGACACCAGGCGCATCAGAGGTATGACAAATTGATATACACAACGGGACGTGTAAACTAA
- Protein Sequence
- MDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPCVYIRPEVDKATANKLKDIVVGHQGEICEDEEDATHIVYPTVDPVEEEYARPVYRRGSHVLVHWYYLPDSHDTWAQPDLPVDVPENVNWDCNRAEPWRVTASWVLDLPQYNEWMNEEDYEVDSNGKKKVHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPQKHGKRKSRTTKRRDNDVDEDEDTASRDNTDVAPPPEVERPAETSTPAPSTPSAPSSASVPASTSASSTAAASSAASAAEPPAEAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLVNYQVETESRPTAMGPPPTSHFHVLSDTPSGLQPLVARPSQPRPAENVPKVEPGLPNGAEAPAPPAAAPAPAAPAPAAAAAAAAPVKAEPSLELGTQPALKLDQYRGGSRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLKLPIEEPYLNDTASGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDVPPPAEKKEGSADVKSEPMEVEEGEAKVKEEVTDAPPAEDKDIKEEPTAPTESGGTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRYDKLIYTTGRVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951784;
- 90% Identity
- iTF_00947841;
- 80% Identity
- -