Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457153.1:6468317-6478027[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-07 0.00018 22.1 0.0 1 33 248 279 248 286 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-07	0.00018	22.1	0.0	1	33	248	279	248	286	0.88

Sequence Information

Coding Sequence: ATGTCTTCGGGAAGTAAAGAAGTAGAGACTTTCTTTGGTAGATGCAGGTGTTGTTTATCctatagttatttaaaaaatatgtggaCACAATATTATTTTCGTGGTAAAAGTGAAGTTTACGCTGAAATGCTGGAACAGTGTTATAATCTGTCTTTGGAGCAACCAGAGCAATCAGACAGCGACCAGATCTGTGAAGGGTGTGTAAGGAGGTTGAGGGATGCTTTATCATTCAGAAAGTTAATCATTGAATCAAGCAATAGACTAGGAGAACTAGTTGTGGAAGgaaatgaaaacaaaatagaAGATGAAAACGAAGATGCTGAAGCAgatatgaataaatatgaaGTGGAAATAGGTTTTGAAAATGAAGACTGGGGCATGGAAGAGAAGGTATTAATTCCCAAAGTAGAAGTGATTGAAGATCAATCTAAGGAAGATTTTGTGGAAGACAGTCAAGAACATTGTCAAATACTACCTGAAATTAGTGATAATAATGAATTTGGTGATGATGGTGATGATGGGAAACATGAAGAAGTTACAGTGAACGGTGAAGTTGAAATAGATGGTCAAGGAGGTGACATAAATGGTGAAAATGCATATGAAAACATAGAATACCTTGAAGAGGAAGTGAATTTGCCACAAATAGACAAAACAAATGAGGATGACAATGATTATGAACCCAAGCGTAAATGGCCAAAGAAACTGCCAAGGCTGGACCGCAATCGTAGATACAAGCAGTACACAGAAGAAGCGCTGCGCACGTGCCTTAGAGAGATCTGGAACGGAATGTCTATTGCAGACGCGTGCAagctctattccatacccaggAAGACCGTAGACAAGAAGCTTAAAACTTATGACGCTGATCAAGATGAAGAAAAGGAAATAACATATAAATTTcacaaagaaataaaatctaTACTTAGTTTCACAAATGCAACACCTTATAAGAGTAACATAGTCAAGTACAGCTGTATATATTGCTTAAAGGCTGTATTCACAGATCCACAAGAGCTAAGAAATCACACACGCACAATGCACACGGATGAACGAACAAAAAAAGTTGATATATTTATGAGACCGCACTGGGAAAATGAAATCTTGAAACTAGATATAGATAATTTACTATGTGTCGTGTGTTGTAGGGTGATACCCGAATGGAATGACATGCTTCACCATTTGACAGTGACTCACAATATTGATTTAGATCTATCGTACTCCAAAGTAATACCATATAAACTGTCAAAAGATTTGAAATGTGCGTTATGCAAGGACAGCTATTCGAACTATCTCCAATTAGATGGACATATGAACTCTCATTATGAAAATTACATGTGCTCAGACTGCGGTGACTATTTCTTGACGCAATCAAGACTCAAAGCGCACCAGAAAACACACATAGTAGGAAGATTTCCATGTGAAATATGTCACAAGGTGTTTGGACAGGAGAAATACAAACGGAAGCATGTCAACTCAGTTCATTATCAGACTTTAAGATATAGATGTGCATATTGCGATGTAAAGTTTCCAAGTGAAATAAGCAGACAGAATCATCTCCAAAGCGAACATATGGATAAAATTAAGCCGATTCACTGCGAGTTGTGCGGCAAGGTATTCTACTGGCGTCAATATTATACATCGCATAAGAAGAAAATACATGGTGAAAAAACTCACGTGTGCGGTCAATGTGGGAAGAAATTCTCAAGGAATTATCAATTGCAAGAACATTTGACAGGTCATAAGGGTGAAAAGAGCGTAGAGTGTCCAATatgtcataataaatatatgacaAAAACGTCTTTAAGAGTGCACATTATGAATCAACATAAGAAGAAAGGTGAATAA
Protein Sequence: MSSGSKEVETFFGRCRCCLSYSYLKNMWTQYYFRGKSEVYAEMLEQCYNLSLEQPEQSDSDQICEGCVRRLRDALSFRKLIIESSNRLGELVVEGNENKIEDENEDAEADMNKYEVEIGFENEDWGMEEKVLIPKVEVIEDQSKEDFVEDSQEHCQILPEISDNNEFGDDGDDGKHEEVTVNGEVEIDGQGGDINGENAYENIEYLEEEVNLPQIDKTNEDDNDYEPKRKWPKKLPRLDRNRRYKQYTEEALRTCLREIWNGMSIADACKLYSIPRKTVDKKLKTYDADQDEEKEITYKFHKEIKSILSFTNATPYKSNIVKYSCIYCLKAVFTDPQELRNHTRTMHTDERTKKVDIFMRPHWENEILKLDIDNLLCVVCCRVIPEWNDMLHHLTVTHNIDLDLSYSKVIPYKLSKDLKCALCKDSYSNYLQLDGHMNSHYENYMCSDCGDYFLTQSRLKAHQKTHIVGRFPCEICHKVFGQEKYKRKHVNSVHYQTLRYRCAYCDVKFPSEISRQNHLQSEHMDKIKPIHCELCGKVFYWRQYYTSHKKKIHGEKTHVCGQCGKKFSRNYQLQEHLTGHKGEKSVECPICHNKYMTKTSLRVHIMNQHKKKGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00433091;
90% Identity: iTF_00433091;
80% Identity: iTF_00432699;