Dpin031690.1
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- lola
- Assembly
- GCA_949752895.1
- Location
- OX457153.1:5664756-5686829[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00086 0.49 11.1 0.0 17 38 443 464 435 468 0.78 2 2 0.0014 0.78 10.4 0.0 13 36 494 517 489 520 0.89
Sequence Information
- Coding Sequence
- ATGAACACTAAACTTCAGTACTCTATTAATGTTAATGAAAGATATGCAATAGTCctcgatgttttttattttactattgacAATACAGAGCGATTTTGCGACGTGACGCTGTACTGCTCGCCGAGCTTCGCCACCCAAGTGTCCGGCAAGAACACCATATCCCCCCAAAGCATACACGGTGTATCGCTCAGAGCTCACagGGTAGTTCTGGCAGCATGTTCGGAGCTCCTCGGCGCGCTGCTGGGCGCCCACGAGGCGCAAGGCGAGCCGGTGCTCGTGATAGACGGGGCGGAACCCGAACACCTCAAGGCGTTGCTGGACTACATGTACACCGGAGAGATGAACGTCCATCATTCTCAACTGGCGAGCCTCTTGAAGACGGCCGAGGAGCTTCGCATCAAGGGTCTAACGGATGTACGGTGGAACAACAAGGATGAACCGCCCGATTCTGATACCGGTGGAGTAGTAGCAACAACAGCAACGCCAGCCCTGCAAGAGTCAAAGGACAAGATAGAGAAACAAGCCGACAAGCAAATGGAGAGGCCAGAAAAGACATACAAGCCTCGTCCAAGGCAGCCTTCTCCGAATCAGCCTTCTCCCAAATACACACTCACAGCGATACCACCTTCGGAGCTACTTGCCTTTATGCGGACCGATGACATTCCTGAGGTAGACGGGAAGGTTGAGAAGTTCAATGTCAATGGTGGACCTCCCCCCTTAATAAAGCTGCCCACAAAAGAGAAACTCAGTCCGGTCAAGAGGGAAAACTCCGACGCAGACAGTCGGAGCCCCAAACGACAGAGGTTAGCGAGTGGCACTGATCACACGGACGACGAATCTTTGTCGGCGCCCAAAttGGAGAAAGACCAGGAGTGGCAGCATGGGAATCTGGACATAACAGCGGAACGGGTGGTCAGTTGGGGCATGGGCGAGGGGGAAGGAGACGACTCCTCGCAGGACGGCTCCGATGAGGACTGGGCGGACGCGCCCACGGACATCGGCTCCTTCCTCCACACCCGGCTGAAGGTCGACGGGGATAACAGTGCAGACGAGGAGAGTAATGACAGTGGTGCTGGACCGCATAGCAGGACTGCTGCGTCCTCCTCTTCATCAGCGGCCACGTCGGTGCCCGAAGTCAAGGTCGAGCCTACGCACCTCGCTTCCGTGACAACTAAAACGGCAACAGTTGGTCCGAAGTCGGGTCCGACTGACCACCGTTTCACGGATGTGGTGAAGCTGAGCGACTACCTTCAGCACGGAAGGCGGCCGCAGTTCTGGGAGGAGCATTACGTCAAGAGGGTGATGGAAGCTGTAAGACTGAGAGAACTGGAGATGAAGCAGGCTGCTGAAATACTAGGTGTTAGTTACGGAACCTTATACGGAAGATATAGGGACGTGTACGGGTGCATCAACAGGCCTTACAAGGCGGTGCGCGAGATGTGGCAGGTGAAGGGCCCCTGCGACGTGATGGAGAGGCTGCAGCGCGGCGAGATGTcgctcaacgccgccgcgcagGCGCTCGGCGTGCCGATCAACTCGCTCGCGGCGCACATGGCCGACTTCCCACCAGTTTCTGAGCGACCGGCACCCACATTGCTGTACCTTGAAATGTATTCAGTTGCAGACTTCGAGCCCATCCCCATAGAGATAGACCCGTCGCTGAAGATGCCCTCAAGAACTCCCCCCACCAAGTACGCGAGGAAGACCAGCACCGTCACGACACCCACAACCCCGCACCATGACAAGGTCGGTATACCTGGCATAGGGCATTATGTTCATACTAGCTGTTGCGGACTGACAgcaaattaa
- Protein Sequence
- MNTKLQYSINVNERYAIVLDVFYFTIDNTERFCDVTLYCSPSFATQVSGKNTISPQSIHGVSLRAHRVVLAACSELLGALLGAHEAQGEPVLVIDGAEPEHLKALLDYMYTGEMNVHHSQLASLLKTAEELRIKGLTDVRWNNKDEPPDSDTGGVVATTATPALQESKDKIEKQADKQMERPEKTYKPRPRQPSPNQPSPKYTLTAIPPSELLAFMRTDDIPEVDGKVEKFNVNGGPPPLIKLPTKEKLSPVKRENSDADSRSPKRQRLASGTDHTDDESLSAPKLEKDQEWQHGNLDITAERVVSWGMGEGEGDDSSQDGSDEDWADAPTDIGSFLHTRLKVDGDNSADEESNDSGAGPHSRTAASSSSSAATSVPEVKVEPTHLASVTTKTATVGPKSGPTDHRFTDVVKLSDYLQHGRRPQFWEEHYVKRVMEAVRLRELEMKQAAEILGVSYGTLYGRYRDVYGCINRPYKAVREMWQVKGPCDVMERLQRGEMSLNAAAQALGVPINSLAAHMADFPPVSERPAPTLLYLEMYSVADFEPIPIEIDPSLKMPSRTPPTKYARKTSTVTTPTTPHHDKVGIPGIGHYVHTSCCGLTAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00432397;
- 90% Identity
- iTF_00432397;
- 80% Identity
- iTF_00432397;