Dpin024821.2
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- -
- Assembly
- GCA_949752895.1
- Location
- OX457144.1:17758839-17759998[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 0.00011 22.8 0.0 5 40 89 124 85 129 0.77
Sequence Information
- Coding Sequence
- ATGGACAGGCAACCTGTTAAATATTGTAGGGAGGAGAGCCAAAAGCGGGCACCAAGGCTAAAGCGGGCACCCTTCATTAAAGTTGAAATTTCTGTAACAAATGCTGTAGGACTGCACGTGAACATGCACTCCACCATGTACCTCCCGCGGCAGTCACCCGGTTCGCCTGTGACCGAAAGCACGCGTGTTGTGTACGGCAAAAATAATTCGcTGGTAAATAAGTACAAAAGAAAAACCTTACAAGCTGCCTGGGATGAAATAGCTATGAAAAAAGCTCTTAAGGAAGTTAAAGAATTGCACAATTCTGTAAAAAGTACTGCCAAAAAATATGGTATACCAAGATCTACCCTCCAAAGACACCTTCAATCGGGATCTGCCAAAAAGAAGCTAGAACGGTACACTACAGTGTTTACTCCTGAGCAAGAAATGGAGCTAATAGAGTACGTCTTTCACATGGACGCTCTATTTTATGGATTGTCAAAGACAGAGTTTCTGGAGCTCGTCTATCAATATGCAGAAATGAATGGTATTCCACATCCATTTAAAAATGGTACTGCTGGATGTGACTGGTACAAAGGCTTTGTTATGCGTCACCCTGATCTAACTCTACGGAAACCAGAAACAACCTCGATAGCCCGAGCACGTGGATTTAATAGGCCCCAAGTTTACAGATTCTTTGATTTGCTTGAGTCCGAAATAGAGAAACATGATATAGATGCTACTCGTCTATATAACATGGACGAGACAGGAATCCAAACTTCTTCCAACAAACCACCGAGAGTTTTGACTAAAATTGGAAAACGACAGGTTGGTTTTATCGCAAGCACTGAAAGAGGAAAGACAACTACTGTAGTCTGTTGCTGCAATGCTGCGGGGTCTTTCGTGTCTCCATTCCTAATTTTCgcacaaaaaaaatga
- Protein Sequence
- MDRQPVKYCREESQKRAPRLKRAPFIKVEISVTNAVGLHVNMHSTMYLPRQSPGSPVTESTRVVYGKNNSLVNKYKRKTLQAAWDEIAMKKALKEVKELHNSVKSTAKKYGIPRSTLQRHLQSGSAKKKLERYTTVFTPEQEMELIEYVFHMDALFYGLSKTEFLELVYQYAEMNGIPHPFKNGTAGCDWYKGFVMRHPDLTLRKPETTSIARARGFNRPQVYRFFDLLESEIEKHDIDATRLYNMDETGIQTSSNKPPRVLTKIGKRQVGFIASTERGKTTTVVCCCNAAGSFVSPFLIFAQKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -