Basic Information

Insect: Dendrolimus pini
Gene Symbol: -
Assembly: GCA_949752895.1
Location: OX457129.1:7274236-7276392[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.1e-09 2.3e-06 28.1 0.0 3 44 16 58 14 59 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.1e-09	2.3e-06	28.1	0.0	3	44	16	58	14	59	0.93

Sequence Information

Coding Sequence: atGGTacgaaactataaaaaaaagagaGATATTAAGTATACGTTGGAATCGTTAAAAGAAGCAGttctagaaataaaaaatggCAATTTAAATTCATACCAGGCATCCCGCAAGTATGGGATTCCGCGAAGCACTCTAATAGACAGAGTTTATATGAGGAGAGGTGCTGTTAAAGATACACGAGGCAGGCCAACCGAAATTGACAATGAAAATGAAAGAAGGTTAGCTTCAGGTCTTCATACTATGGAGAAATATGGCTTTGGTCTCTCATCCAAAGAAACAATAGCTTTAGTTACTAAATTCGTCAagaccaacaacataaaaaccCAGTTCAAAAACGACACACCTGGCTATGATTGGTTTTCGGCATTttgtaaaagaaataatttatcattaaaaaaaccacAAGCAGTAGAAATGTCCAGGAAAGCTGCATGCGACCCGTTTAtagttaaacaatattttgatacaCTAGAAACATGCCTTAATGAGATGGATTTGAAATTTCATCCAGAAAGAATCTGGAATTTAGACGAGTCTAGCTTCAGTAAAGACccagaaaaaacaaaacttgtGGGCGCCAGAGGTTTTGCTAGCACTAGAACCATAGCTTCCGCTGGCAAAGACAACGTTACAGTGTTGTTCACTGCGAGTGCATTGGGTGAAAAGCTGGCTCCATTGATTATATACCGCGGAAAAAACGTTTGGGACCAATGGATGTCCGATAGGGCATTCGCAGGCACCACATATGCTGCGACTAAAAACGGATGGATAGAGTCAAAAGTCTTTGAAAAATACATGCTTGGCACAGTCTTGCCTCACATAAGCAAGGAATCGCCATGCTTGCTAATATATGATGGTCACTCTACACACATACAGATAAATTTGTTAGAAAAAGCTGCAGAACTAGGGGTAACCATTTTAAAATTACCATCCCACGCTAGTCATCTTTTACAACCATTAGACCTGTCAGTCTTTAAATCGATGAAAGACAAATGGGATGCAAAAATATTAGCATGGCAGCGTCTTAACGTCGGGGCAAAGctacaaaaaaatcaatttagcCAAATCATCGGGGAAGTCTGGAACGAACTAGATTCcaaaataataagaaatggATTTAAAAAAGGCGGCGTGTTTCcactcaataaaaatataataccagATGAAAAATTCGACCCAGAGTcccttaatatatattttaaaagtaaggaaATAAAGACCTTACCATCCTTATtctatttatgtttaaaacaaataaattattgtaatgaGAATAAACAGAACACGGATAATTTTTTGAAACCGTCAGAAATTACGGTATGCGGTAATCCTAACAATCCAACAGGAATTCAAATTATTGAAGACCGGATCATTACAAAAGAACATTCACAACTgtcatttgaaagtttattgcTTAATACTCTGAAGAAATCCGATAGTACAAATAAAGTGAAGAAAAGAAGAGCAGCGAAAGGTTGTGAAGTTATAACAAGAGAAGATTTTTTAAGTAAGCTGCGAAACGAAAAAatccaaaaagaaaaaaacgaggctgaaaaacaaaataaacgaTTAAAGAgaagtttaaataaacaaaaaccagCAAAGAAAGGAAATACTAAACTTTCATCCAAGGCTAAGAAACGACCCAAGAAAATACTGTATTCCTCAGATGAAAGTAGTGAATTTAGCGAAATAGCAAGCTCTGATTCATCTGAAGATTGGAATACTTTTTGTGAAAATACATTACAGAGTGACAAAGAAAATGACTTCAATGaccaaaatacaaattcaaaaattcTGCAAGAAATATCTACTCAGAGTAATGAAAGGGCTGATCATATTTTGGAAGAATATAAAACGAATTCAGCAAGCAGATCTCCACAAGTTGATGACtggctattattaaaattttcaacaaaaagaACAGTGAAGCACTTTGTTGGTAACGTCATTTCAATGGAAGATAATAATCCAAAAGTTAAATATTTGAGATTAATTAAGAATAGCAAAATTCAGTCCTTTCATTACCCTGACGTTGAAGATATCTCCGTTATGAGACATGATGACATTGTGATGTTTCTTGAAAACCCTCTAATTACCCGAAGAGGGCATGTAATCTtcaaggaaaatttaaaaatatttaatattcagtAA
Protein Sequence: MVRNYKKKRDIKYTLESLKEAVLEIKNGNLNSYQASRKYGIPRSTLIDRVYMRRGAVKDTRGRPTEIDNENERRLASGLHTMEKYGFGLSSKETIALVTKFVKTNNIKTQFKNDTPGYDWFSAFCKRNNLSLKKPQAVEMSRKAACDPFIVKQYFDTLETCLNEMDLKFHPERIWNLDESSFSKDPEKTKLVGARGFASTRTIASAGKDNVTVLFTASALGEKLAPLIIYRGKNVWDQWMSDRAFAGTTYAATKNGWIESKVFEKYMLGTVLPHISKESPCLLIYDGHSTHIQINLLEKAAELGVTILKLPSHASHLLQPLDLSVFKSMKDKWDAKILAWQRLNVGAKLQKNQFSQIIGEVWNELDSKIIRNGFKKGGVFPLNKNIIPDEKFDPESLNIYFKSKEIKTLPSLFYLCLKQINYCNENKQNTDNFLKPSEITVCGNPNNPTGIQIIEDRIITKEHSQLSFESLLLNTLKKSDSTNKVKKRRAAKGCEVITREDFLSKLRNEKIQKEKNEAEKQNKRLKRSLNKQKPAKKGNTKLSSKAKKRPKKILYSSDESSEFSEIASSDSSEDWNTFCENTLQSDKENDFNDQNTNSKILQEISTQSNERADHILEEYKTNSASRSPQVDDWLLLKFSTKRTVKHFVGNVISMEDNNPKVKYLRLIKNSKIQSFHYPDVEDISVMRHDDIVMFLENPLITRRGHVIFKENLKIFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -