Dpin001917.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dendrolimus pini
Gene Symbol
jarid2b
Assembly
GCA_949752895.1
Location
OX457125.1:8128295-8146456[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-15 4.8e-12 47.0 0.1 6 88 739 817 735 818 0.88

Sequence Information

Coding Sequence
ATGCTAGTGAAACCACAGGTGAAAGCATTGGCACAAAGAAAGTTCGCTCAGGGGGCTTACATTCCCCCAGCGAATACAACAAGCACCACTCCTGAACGTAGAGCTGAGCCACAGACAAGCACAAACAGGGATACAACGAATATTGTCTTAAACTATGTATCAGCTAAGACATTATTAGATATTGTTTCACTCAAAGGTCCTCTGTCAAGCTCAATGCAGCCAAAAGTATTACTAGACAGATTAACAACAGCAGATATGCCAAAAGAAAAAATACCATCTAGGTCACCATCTAAAATGGTCACAAGatccaaaacaaaaaaactaatacATAAGAAAAAAGATGTGAAGTCTAAAAAGCGAATCTTAAAGAGACTAGTCAGCAATATCAGTAATAAGAGTAATAATGAGTCCAATGACTTTAATACAATAGAAGACAATACTCCATTAACTCACTTCTTAAAGAATACTGAGCAAAAACCTGCAAACATAGCTGTTTGTGGCAATGCAGAAGctgCACAACCAGTTTCATCAATGGAAGTGGAGCCCAATATAGCACAGAATGAACTGGATGTCAACACATCTTGCTATTATTCACATCAAGAGATACAGAAATGGCTGGCAGATTCTATCTCAGAGGAGGAGGTGACTGAAGAGGTACCTACAGATGTAGCTGCAAAGGTACCTGAGGAGGTGCCTGCAGAAGTATCTGAAGAGATACCTAAGGACTTGCCGGCAGCAGACACTCAAaaaAATGTTCAACAGGCTCAACAGACTGAAGCCTTAAACAATGACAGATGCAATTGTAATAATACTAGCCAAGTTTCGAGCATAGCCTTCTCTGAAAATATAGGTAAATATGAAGGCTATCACAAATGTGAGAAATGTTACTTGGCTGATAAATTGAAAACTTTAAGTAGAATATATGATACATCACCAATTCCTGCAAACATACCGTACTATGACTGCGATTCTAATACAGACGAAGCCGAAAAAAGACCTGAATTGATCAGAACTAATGAGCAACTTCTGAAAAATGCTGAATTATCAACAAATAAGGGTGACTTGTACATGAATGTGTTACAGTTTCTGCGACAATTAATACAGACATCAACAGATACAAATGGGATAATGCATGCAAAGTTAGTACCACCCACAACTGAGGCATATCCAATTAACAATGCCTCATTCATTGAGAATAAAAACCTAATAAACCAAGTGGTGGCGTCTTTGGCCAGCAATAGTGAGCTATTGCAAGTTATTATGCAGTTGCAAAACAGCTCTAAAAGCCAGATGGATCCTCCCTTACTTCCAGTAAATGACAATCATTCTGAGAGTTCACATTCATCTCAAACTATGAAATTGTATTTGTCTGAATCATCAGAAAATGCTGATGTTGACATTAACCCTATTTCACATGCAAGCTTCAGATTGGATTCCATAAATTTAAACCCTACTTCTGAGTTTCCTACTCAATCTGCTTCTTTTGTCAATAATCTGGATGTAACTAAGGAAATAACAATGCTAGATACTGATAGCGAACAACGGGATATTTCAGTGCCAGATAGACTTAATGAACAACAGGATATTTCAATGGCAAATAATCATAATGAACAAAGGGATATTGAAATGCCAGATAGTGATAATACACAACTGGATAACACAATCTTAGATAGTCTTAATGAACAAAAGAACATTGCAATCGCAGGTAGTCATAATGAGCAACAAGACATTGCAATGCCAGATCAGGATAGTACAATACCACCTAGTTGTAAAGAACAAAAGCAAATCACTACCAcatcttattataatattagaaagatCCCTAAAATTGAATCTCCTCTTACCCTGTCTGATGACGACTCAGTTGTAGAATGCACTGAACAGAACTATACAGATATGGAAGTCAGAAGTGTAGCTAGAAGTCAATATGCAGCAACACCATTCCCTCTACCATCTGCATCAAGATATGTAGGTTTACAGGATTGTTCAAAAGCCATAGAAGCACCAGTATTTTACCCAACTAATCAGGATTTCCAAaATCCCATTgcctattttgaaaaaatattgccCGAAGCATCTAAGTTTGGGTTGTGTAAGGTCGTATCTCCACGTGATTTCAAGCCCCCTTGTAACATTAACAATGAGATCCGGTTTAAGGTGGTAGACCAATATATTCCACGGTTATTCTCGAGGTGGGGGCCAGCTTCTAAAGAAATGTGTGCATTCAGAGCCCATTTGGCGACTGAAAAGGTGAAGTTCACACGGGCACCATTGCTTGATGGTATGGAAGTAAATCTACCAAAACTGTACAATATTGTTCAGCAGCATGGTGTCGTGAGAGCACTGACCAAAAAACTTTGGGGTCGTATCGCAGAAGAGATGGCATTACAAAAGAATACTaagccaaataaaaaaattgaacaagTTTACTTGAAATGCCTTTTACCCTACCGAATGTTATCAGACGAGGAGAGACAAAATATTACACAAAGGCTGGAAGTAGCTTGGTCTAAAAAACACAAGAAAATGATGAAGCGCTCGATGAACCCACTTCATAGGAAAAATCGGTTGCTTGGAGATTCTGAATCATCTGAAGAGGACACGGAAGAAAAAGACCTTATTGAAGAGGCTCTAGCTGACTCAGAAGACTGTGTAGTTCCTGGACGCACCATGAGCCTTTTTGCATATAAAAAAATTGCAAAAAACACAATGTCAGTGTTATTCCCAAAATCATCAAGTGTGATTCCTTTAACGAAAAATATTGAGGCGGAGTATTGGAGATTAGTGACCCAGGGTCAGGACCATCTATGTATAAATACTGCCTCCATTGACACTGGTGCTGAAGGGTATGGGTTCCCAAAGGATCagagtaataaatataccaaaCACCCATGGAACTTGAAGATGTTGAGCCAGAATAGTAGCAACGTGCTTCGTTTCCTGGGCTCAGTGTTGGGTGTAACTGTCCCCACACTCCACTTGGGGATGGTGTTCAGCACTAGTTGCTGGCATCGTGACCCGCACGGCCTTCCTTGGGTAGAGTATATGCACGAGGGTCCTGGCAAGATATGGTACGGCATACCAAATGAGCAAAGTTCAGCTTTCCGTAATGCTGTTTCTGATTTGTGCCCAACAGTTTGCCAGAATAAGTCAGTTTGGCTACCTTCAGacgTCACTATGATTCCACCGAATCTTCTTCTAAAACATAATGTTTCTTTGTCACGAGTAGAACAACATCCAGGCGAATTCATTATAGTTTTCCCAAAGGCTTATTCATGTTCAATTTCTACTGGATACACAGTGTCAGAGAGTGTTTATTTTGCTACTGCCTCCTGGCTAGATGATGTTCACCAGCTGTTCAATGATCTAAAGAATTGCTGCGAGCCGACAATGTTTTCTCTAGAGAAATTGTTAGTAGCGGTAGCGAGAGATGAACGCGCCCCTGTAGACCAGCTGAAAAGAGTTCGCACGAGTCTAGTTCCCCTGATAGAAGAGGAGCTAAATTATAGGGACGAGctcaaagaaaaaattaaaggcTTAAAAATTACTGTAAGTGAAATTGTGTTTATTTCTCATATACACTACTTCATATTGTGTGGTGgtaaataa
Protein Sequence
MLVKPQVKALAQRKFAQGAYIPPANTTSTTPERRAEPQTSTNRDTTNIVLNYVSAKTLLDIVSLKGPLSSSMQPKVLLDRLTTADMPKEKIPSRSPSKMVTRSKTKKLIHKKKDVKSKKRILKRLVSNISNKSNNESNDFNTIEDNTPLTHFLKNTEQKPANIAVCGNAEAAQPVSSMEVEPNIAQNELDVNTSCYYSHQEIQKWLADSISEEEVTEEVPTDVAAKVPEEVPAEVSEEIPKDLPAADTQKNVQQAQQTEALNNDRCNCNNTSQVSSIAFSENIGKYEGYHKCEKCYLADKLKTLSRIYDTSPIPANIPYYDCDSNTDEAEKRPELIRTNEQLLKNAELSTNKGDLYMNVLQFLRQLIQTSTDTNGIMHAKLVPPTTEAYPINNASFIENKNLINQVVASLASNSELLQVIMQLQNSSKSQMDPPLLPVNDNHSESSHSSQTMKLYLSESSENADVDINPISHASFRLDSINLNPTSEFPTQSASFVNNLDVTKEITMLDTDSEQRDISVPDRLNEQQDISMANNHNEQRDIEMPDSDNTQLDNTILDSLNEQKNIAIAGSHNEQQDIAMPDQDSTIPPSCKEQKQITTTSYYNIRKIPKIESPLTLSDDDSVVECTEQNYTDMEVRSVARSQYAATPFPLPSASRYVGLQDCSKAIEAPVFYPTNQDFQNPIAYFEKILPEASKFGLCKVVSPRDFKPPCNINNEIRFKVVDQYIPRLFSRWGPASKEMCAFRAHLATEKVKFTRAPLLDGMEVNLPKLYNIVQQHGVVRALTKKLWGRIAEEMALQKNTKPNKKIEQVYLKCLLPYRMLSDEERQNITQRLEVAWSKKHKKMMKRSMNPLHRKNRLLGDSESSEEDTEEKDLIEEALADSEDCVVPGRTMSLFAYKKIAKNTMSVLFPKSSSVIPLTKNIEAEYWRLVTQGQDHLCINTASIDTGAEGYGFPKDQSNKYTKHPWNLKMLSQNSSNVLRFLGSVLGVTVPTLHLGMVFSTSCWHRDPHGLPWVEYMHEGPGKIWYGIPNEQSSAFRNAVSDLCPTVCQNKSVWLPSDVTMIPPNLLLKHNVSLSRVEQHPGEFIIVFPKAYSCSISTGYTVSESVYFATASWLDDVHQLFNDLKNCCEPTMFSLEKLLVAVARDERAPVDQLKRVRTSLVPLIEEELNYRDELKEKIKGLKITVSEIVFISHIHYFILCGGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00432919;
90% Identity
iTF_00432919;
80% Identity
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