Dpon001913.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- gata4
- Assembly
- GCA_000355655.1
- Location
- NW:864088-934401[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-18 7e-15 53.6 2.7 1 34 289 321 289 323 0.97 2 3 4.6e-19 9.4e-16 56.4 3.3 1 35 343 376 343 377 0.97 3 3 0.73 1.5e+03 -1.9 0.1 3 19 488 504 488 506 0.85
Sequence Information
- Coding Sequence
- ATGAAAACTAAGCCCGCTTATCAGCGCTTGTACGGTGTGCAGTACGGGGACGAGCAGCAGCAATGTGCCACCCCTTACAGTCCCGCCTCCCATCACGAGGGGGCGGAGCGATCGCCTGCGGCGTCGCGATCCGCCACTCCGCTCGAATTTACCACCTATCCGACCACCGATGTTGACCAGGACAATTACCAAACACTTAACCTGATCCGGGGGGAAAATGAGGCAATGTTTCGCTTCGATGAGATGCCCCTAGAAGGAGATCCGCCAGGGACGCTGTTGCAGCTGGGGGCGCCCCAGGGGCCCTCGAATGGGGCTTCGCCCCATGACAGCGAGTCCCCAAGCCCAGGGTCGCCCCACAGGGGCCTGGCGTTTGCTAGTTTAAGCATGCAGCCTGACACTCACACGATATTGGAACCTGCAGGGGCGCAGCTCACTCAGCTCACCAGCCACATCAGCTACACGGGGGGATTGGAATCCAACGGCGCCGCTGGCACttcgATCTTCGCGAGAAACTACAATACGCCCACGATGCATTACTATTCCGGAACATCGTCAGAACTGCATGGACAAAACCAGATCTGGTCCAGCAATGTCAATACAAGTGGAGGCGTTTTGAGTGACCCCAATGGGGTCTCGGCCGCCTCCAATGCCTCCCTGCCCGCCTTCAATCGGCTCTCGGGGTTCCAAAACACCCCCCGACCTGGAACTTACAGCCCAATCACATATCAGGATTTTTCCTATGCGGACCCCACCGGATACAACATTAGTCCGGCGGCGACGCCCAGAAACAGGATGAGTGCAGCAGGAACTCTCTCAGCAATTGCTCCAGGTACCGCAGCCGAGTACTTCACTGAGGGTAGGGAGTGTGTGAATTGCGGCGCCATCGACACCCCTTTGTGGCGTCGCGACGGTACCGGCCACTACCTGTGCAACGCCTGTGGGCTCTACCACAAAATGAACGGCATGAACCGGCCCTTAGTCAAGCAGCCTCGTAGATTGtCGGCGTCACGACGCGCCGGTCTCACTTGCACGAACTGCCAAACGGCCCAAACCTCCTTATGGAGACGAAACGCCCATGGGGAGCCGGTTTGCAACGCTTGCGGCCTCTACTACAAATTACACATGGTGGCGCGGCcattatcaatgaaaaaagACACCATCCAGACGCGAAAGCGAAAACCAAAGGGGAGCAAATCGGGGCAGGCGAACGGCAATCCGGCCTCAAACCGAGCGGGTCTGAATAATCGGGGCAAATCGGCcgtgaaaatggaaaacaactCGCTTGATTCCTTCAACCTGTCGCATCTACAGCAGACGAGTAACTTTGTCTACCCCACTCAGCCGCACGTGAAGCTCAGTCCGTACTCTTCGCACTCTCCCCAGAATCTGGCGCATGACTACTACGGGACGATGTTGCCTCAAACGGCCACGCCCAGTCCTCAATCCCATTCGTCTGATCTGCATTGCGACTCGCCGCACTCTCCTCTATTgatcaacaacaacaataacCATACGAAAATCAGCGAGCACAACTTGGATCGAGTATCAGTGGTGTCGCTGACCAAGTAG
- Protein Sequence
- MKTKPAYQRLYGVQYGDEQQQCATPYSPASHHEGAERSPAASRSATPLEFTTYPTTDVDQDNYQTLNLIRGENEAMFRFDEMPLEGDPPGTLLQLGAPQGPSNGASPHDSESPSPGSPHRGLAFASLSMQPDTHTILEPAGAQLTQLTSHISYTGGLESNGAAGTSIFARNYNTPTMHYYSGTSSELHGQNQIWSSNVNTSGGVLSDPNGVSAASNASLPAFNRLSGFQNTPRPGTYSPITYQDFSYADPTGYNISPAATPRNRMSAAGTLSAIAPGTAAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCQTAQTSLWRRNAHGEPVCNACGLYYKLHMVARPLSMKKDTIQTRKRKPKGSKSGQANGNPASNRAGLNNRGKSAVKMENNSLDSFNLSHLQQTSNFVYPTQPHVKLSPYSSHSPQNLAHDYYGTMLPQTATPSPQSHSSDLHCDSPHSPLLINNNNNHTKISEHNLDRVSVVSLTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -