Basic Information

Insect: Dendroctonus ponderosae
Gene Symbol: ZBTB41
Assembly: GCA_000355655.1
Location: NW:596651-607192[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.015 0.76 9.6 2.1 2 23 43 64 42 64 0.95

2 16 0.00083 0.043 13.5 2.8 1 23 70 92 70 92 0.98

3 16 7.6e-05 0.0039 16.8 1.0 2 23 137 158 136 158 0.96

4 16 0.00068 0.035 13.8 0.3 1 23 164 186 164 186 0.98

5 16 0.14 7.4 6.5 0.3 1 20 192 211 192 211 0.91

6 16 4.2 2.2e+02 1.9 6.8 1 23 212 234 212 234 0.94

7 16 6.9e-06 0.00036 20.1 0.5 1 23 240 262 240 262 0.97

8 16 0.00019 0.0097 15.6 0.7 1 23 268 290 268 290 0.98

9 16 0.00034 0.018 14.8 6.5 1 23 296 318 296 318 0.97

10 16 0.00015 0.0078 15.9 3.9 1 23 385 407 385 407 0.96

11 16 0.00012 0.0061 16.2 1.3 1 23 413 435 413 435 0.98

12 16 5.1e-05 0.0026 17.4 3.3 1 23 441 463 441 463 0.96

13 16 0.35 18 5.3 2.0 1 23 469 491 469 491 0.85

14 16 1.2e-06 6.1e-05 22.5 1.3 1 23 497 519 497 519 0.98

15 16 0.00014 0.0075 15.9 3.1 1 23 525 547 525 547 0.98

16 16 0.0002 0.011 15.4 2.6 3 23 555 575 553 575 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.015	0.76	9.6	2.1	2	23	43	64	42	64	0.95
2	16	0.00083	0.043	13.5	2.8	1	23	70	92	70	92	0.98
3	16	7.6e-05	0.0039	16.8	1.0	2	23	137	158	136	158	0.96
4	16	0.00068	0.035	13.8	0.3	1	23	164	186	164	186	0.98
5	16	0.14	7.4	6.5	0.3	1	20	192	211	192	211	0.91
6	16	4.2	2.2e+02	1.9	6.8	1	23	212	234	212	234	0.94
7	16	6.9e-06	0.00036	20.1	0.5	1	23	240	262	240	262	0.97
8	16	0.00019	0.0097	15.6	0.7	1	23	268	290	268	290	0.98
9	16	0.00034	0.018	14.8	6.5	1	23	296	318	296	318	0.97
10	16	0.00015	0.0078	15.9	3.9	1	23	385	407	385	407	0.96
11	16	0.00012	0.0061	16.2	1.3	1	23	413	435	413	435	0.98
12	16	5.1e-05	0.0026	17.4	3.3	1	23	441	463	441	463	0.96
13	16	0.35	18	5.3	2.0	1	23	469	491	469	491	0.85
14	16	1.2e-06	6.1e-05	22.5	1.3	1	23	497	519	497	519	0.98
15	16	0.00014	0.0075	15.9	3.1	1	23	525	547	525	547	0.98
16	16	0.0002	0.011	15.4	2.6	3	23	555	575	553	575	0.98

Sequence Information

Coding Sequence: ATGATTGCgTTACAAAATAAGAGATACATTAAAGCAAAAGATGAAATTACAATTGATGAGCATTATCTGTCCGAACAAGGAAGCATAAAATTGGAACCAGATGCTGAATCTGAGACCAATAGATTATGCTGCAACATTTGCTCTAAAACATGCGACGACGTGCTACAGCTAAATGAACATTTGCTAATTCATTTACAGAAACTGCCGTATGCATGCGATATTTGCCATTTAAGATTCAAGTGGAAAAGTTATTTAGAGCAACATCGAAATAAGCATACGAAAGAAAAGCGATGGACAGTTGGGTCATACCCTGaagtaaaacaagaaattgaaattaatgaatttgatGTGCCGGAATACGTAAAATTAGATTTCAAAGCAGATGATATGTCCAAGACAAATGGGTTATGctgcaatatttgcaataaatcttTTATAGATGTCCTGCAGCTAAACGAACATTTGCTCACTCATACAGAAGACCGCCCTTATGCATgcgatatttgcaatttacgATTCAAATGGAGAGGAAGTTTAGCTCAGCATCGAAATACGCATACGAAACAAAGACAGTACGAGTGCAACATTTGTcagcaacaatttttatacCGTACAGGTTTACGTCTTCATTTGTTCGATTGTGAAGTTTGTCATAAGAgttgtttaacattttcatgtttatATAGTCATAAAGCGGTTCATTCAGGCCACAGACCATTTGCATGCGATATTTGTAAAATGAGATTCAAAAGAAAGGgcgctttaaaaattcatctaAATTTGCATACGaaggaaaaacagttttattgtaaCATTTGCGATAAAGCTTCGTCATCGTCAAGTGCtgcaattaaacattttaaaagacATTCAGACCACAATCCTTTTGATTGccatatttgcaatttaacatTCAAACTCAAATGTACTTTAAATAAACACCAAAAAGTCCATCAAAATCGGGTTACAGAGTGtcattatttttgttttagattACGAAATGAGGCGCGCATTGAACCAAAAGAAGAAGTGACAATTGATGAGCATGATCTGACTGAATACGAACACTTAGAGTTGAAAGCAGATAACACCTGTCGTCTAACAAGTCTACAGCTTAACGAACAGTTGCTCACTCGTGCAGAGGAACGCCCTCATGCATGCGACTTTTGCAATCTAAGATTTCGactgaaaagtaatttaattaagcataGAAACAAGCATACGAAACAAAGACAATACATTTGCAAGATTTGTCAACAAAAGTTTATATACTCTGCCAGTTTACATGTTCATTTAATCAAACATTCAAACGATCGCCCTCATGCTTGTGATTTTTGCGATTCAACATTTAAGCGAGCAAGTGATCTAAAAACTCACCGAAATAAGCACACGAAGGAAAAGCAGTACGATTGTGAAGTTTGTCATAAGAGGTTTTTATCAGTTACAGGGTTATGTGGTCATAAGGCGGTTCATTCAGAATATAGACCATTTGAATGCAATATTTGTAAAACGAGATTCAAAAGAAAaggcgatttaaaaattcatctaAATTTGCATACGAAGAAAAGGCAGTTTCATTGTAACATTTGCAATAAAGCTTTCCCATCTTCAAGTGCTACCAGTaagcattttaaaacacattcaCACGACCGTCCTTTTGGttgcgatttttgcaattcaaagTTCAAAACCAAACGTAGTTTAGAGAAACACCAAAAAGTCCACAAGAATCGGGAAACGGTGTGA
Protein Sequence: MIALQNKRYIKAKDEITIDEHYLSEQGSIKLEPDAESETNRLCCNICSKTCDDVLQLNEHLLIHLQKLPYACDICHLRFKWKSYLEQHRNKHTKEKRWTVGSYPEVKQEIEINEFDVPEYVKLDFKADDMSKTNGLCCNICNKSFIDVLQLNEHLLTHTEDRPYACDICNLRFKWRGSLAQHRNTHTKQRQYECNICQQQFLYRTGLRLHLFDCEVCHKSCLTFSCLYSHKAVHSGHRPFACDICKMRFKRKGALKIHLNLHTKEKQFYCNICDKASSSSSAAIKHFKRHSDHNPFDCHICNLTFKLKCTLNKHQKVHQNRVTECHYFCFRLRNEARIEPKEEVTIDEHDLTEYEHLELKADNTCRLTSLQLNEQLLTRAEERPHACDFCNLRFRLKSNLIKHRNKHTKQRQYICKICQQKFIYSASLHVHLIKHSNDRPHACDFCDSTFKRASDLKTHRNKHTKEKQYDCEVCHKRFLSVTGLCGHKAVHSEYRPFECNICKTRFKRKGDLKIHLNLHTKKRQFHCNICNKAFPSSSATSKHFKTHSHDRPFGCDFCNSKFKTKRSLEKHQKVHKNRETV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -