Dpon005890.1
Basic Information
- Insect
- Dendroctonus ponderosae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_000355655.1
- Location
- NW:1771363-1819709[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.37 3.8e+03 -3.2 0.8 72 109 20 57 7 69 0.51 2 3 2.3e-103 2.3e-99 330.9 8.6 1 218 164 373 164 373 0.94 3 3 0.053 5.5e+02 -0.5 0.4 66 113 648 695 625 702 0.76
Sequence Information
- Coding Sequence
- ATGGGAGCTTCAGAATCTAGTAGTACAGCTGAAGGAAAAGAAGTGAGATCAATTCAGGAGTCATCGAGATTAAAAACTGTGACAATGGATGTTCCGAAAGAGTCAAACGATGGAACGGTCACTGAGAACGCCATTCAGAAAGAAGAAATTGTTAGTCTGAACGACGAAGAAGATTCCATTACGGAAAGTTTGCCAGCCACTGAAGAACTTACAGGGGAGCCGCAAGATCGGTCAGACGGCTCTGATTCTGGTCTAGGATCAGAAATAGCTGAAGAACGGGCAGATGTTCCTCAAGCCACTACGTTTGGGGAAAGCGACAGCGACACTTCATTTGatcgCATAAATAAAGCGTCATCATCAAATCATGGCGGAGAGGACGAAACCAGTCCGCCAGTCCATCCACTGGAGATAAACCTTGATAAAAAACCGACAAAAAGCAGTCTTAAACGGAAAATATCCACGGACGACGAAGGAACTCCTGccaaagtgaagaaaaaacgaGGAATCAGTTTCGATAGTGTTAccgtattttattttccacgaaCTCAAGGCTTTACTTGCGTTCCGTCTCAAGGAGGATCTACATTGGGAATGAGCTCGCACCATTCCCAAGTCAGAAAGTTTTCTCTATTGGAGCATGCAAACGAACAACGCAGGATACATCGACAACTTCTTCAACAACTAAAATCTGAACGAAATGTGTCCGGTGCCCCCGCTGCTTCATCCAGCGAAGAAAGTGATAGTGAAGCTGAAATAAGTGATACGTCAGAATCTGAAATGGACTTGGATAACTTTTACTTTCTTCAACCCGTACCAGCTCGACAAAGAAGAATTCTTCTGAGAGCAGCAGGTGTAAGAAAGATAGATTCGCTCGAAAAGGATGAATGTAGAACGATTCGTTCTTCTCGCGAATTCTGTGGCTGTGGATGTAAAGGTTACTGTGATCCGGATACTTGTTCGTGTAGTCAAGCCGGCATTAAATGCCAGGTTGATCGATTGAATTTCCCATGTGGTTGTACGAGAGATAATTGTGGAAACTCGACCGGTCGAATTGAGTTCAATCCCGTGAGGGTGCGAACTCACTTTATCCATACTCTGATGAGACTAGAACTTGAGAAAAAAGATGAAGAAGACATGCGAGGAAAGAAAGAGCTCACGTGGATTGCCAACGAACGACTCATGTCCCACTATCATAAAGAAGGCCATCAGTCGCAACAGCAATATAAACTAGATGTAAATAAATGTAGCGGTAGTTTACTCAGAGACATAAGCTTAGGTGCCCACATAGAAGTAGAAAATTGTGTACATAATGGCAGCTTTACTAATCTGCATTACGGTGCTCCAGGTGAGGGGCCTGGATCCTTTTGGTACAGCCCTTCAGCATCCCTTTCCGAACTTCCAGCACGCGAAGATTCATTAGATCTGTACACTTTCCGAGAAAATTGGTATGGCGAATCAAATGGGGCCGACAAGAACGAAAGACACCACCAACAACAGCAATATGCACCCCACACGGCGTCGATGTCTTCGAGCAGCAGCAGCGGCCATCAGGGTTTTCCAATCGACCCCCGTTTTGCCGAGCAGGCGCACGGACCCTCTCAGCACGGCCCGCTTGTCAGCGCCGCCCTGCCCACGATTCCCTTCGCCCCCGGCACGTCCACCAGCACCCCCCCGATCAATCAGTACGCGCAGATGCACCCTGCCGGTTTCAGCGAAATTACGGGGGTCGAATTTTTCAACCCCTACCCGACCAACTATGCTGAAAGCTTCCAACAAGCTCCACCGTCATCTTTCAATCAGTTCTCCAACGAAAATTATCATCCATCACCAGAATCAAAAGAGAACCAATACACCGACTTGCATACAGTGGGGGCCAACTCTAGATTAGAATCGATTTGCGATCATCTGCTGTTAAATAATCGTTACAACTATGCTGGTTACGAGGAATCAAATAGTTTCACTGCGCTGAGTACTGACGAAGCCACTCAGGACTGCACTGAGACACCGGAATCACATCCGACAGATGCTGAGAATACTACCACCAGCAGCGTAGACAAATCGAAGGAATCCGATGAGAATTTCGGCGAAATTATTATGAAGTCAATGGTGGAAACCGTGtcagcataa
- Protein Sequence
- MGASESSSTAEGKEVRSIQESSRLKTVTMDVPKESNDGTVTENAIQKEEIVSLNDEEDSITESLPATEELTGEPQDRSDGSDSGLGSEIAEERADVPQATTFGESDSDTSFDRINKASSSNHGGEDETSPPVHPLEINLDKKPTKSSLKRKISTDDEGTPAKVKKKRGISFDSVTVFYFPRTQGFTCVPSQGGSTLGMSSHHSQVRKFSLLEHANEQRRIHRQLLQQLKSERNVSGAPAASSSEESDSEAEISDTSESEMDLDNFYFLQPVPARQRRILLRAAGVRKIDSLEKDECRTIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCTRDNCGNSTGRIEFNPVRVRTHFIHTLMRLELEKKDEEDMRGKKELTWIANERLMSHYHKEGHQSQQQYKLDVNKCSGSLLRDISLGAHIEVENCVHNGSFTNLHYGAPGEGPGSFWYSPSASLSELPAREDSLDLYTFRENWYGESNGADKNERHHQQQQYAPHTASMSSSSSSGHQGFPIDPRFAEQAHGPSQHGPLVSAALPTIPFAPGTSTSTPPINQYAQMHPAGFSEITGVEFFNPYPTNYAESFQQAPPSSFNQFSNENYHPSPESKENQYTDLHTVGANSRLESICDHLLLNNRYNYAGYEESNSFTALSTDEATQDCTETPESHPTDAENTTTSSVDKSKESDENFGEIIMKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -